Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fragaria_20iinumae_20[genbank_20GCA_5F000511975.1_202013-12-06] 117,822 sequences; 199,627,509 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq86039 80.6 4e-13 seq8779 75.2 2e-11 >seq86039 Length=1031 Score = 80.6 bits (88), Expect = 4e-13 Identities = 87/113 (77%), Gaps = 2/113 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||| |||| | || ||| | | ||||||| | || || ||| || |||| Sbjct 397 GTACGAGAAGAACTGTTGA-TTC-GCACAATTGGTCATCGCCCTTGGTTGAAAAGCCAGT 340 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATC 113 | |||||||||| | | ||| ||||||| ||||||||||||||||||||||| Sbjct 339 GGCGCGAAGCTATCGTGCGCTAGATTATGACTGAACGCCTCTAAGTCAGAATC 287 >seq8779 Length=965 Score = 75.2 bits (82), Expect = 2e-11 Identities = 47/51 (92%), Gaps = 0/51 (0%) Strand=Plus/Minus Query 63 CGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATC 113 |||||||||||| | ||||||||||| ||||||||||||||||||||||| Sbjct 965 CGCGAAGCTACCGTGCGCTGGATTATGACTGAACGCCTCTAAGTCAGAATC 915 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 818264964608