Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fragaria_20nipponica_20[genbank_20GCA_5F000512025.1_202013-12-06] 215,024 sequences; 206,414,839 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq137849 361 8e-98 seq137008 266 5e-69 seq207379 123 4e-26 >seq137849 Length=1698 Score = 361 bits (400), Expect = 8e-98 Identities = 238/258 (92%), Gaps = 5/258 (2%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| | Sbjct 706 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCT-GATGACTCGCACTTACTAGGAATT-C 649 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120 |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 648 ATCGTTGAAGACCAACAATTGCAATGATCAATCCCCATCACGATGAAATTTCAAAGATTA 589 Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGC--GCGCGTGC 178 ||||| | ||||| |||||| |||||||||||||||||||||||||||| |||||||| Sbjct 588 CCCGGGCATGTCGACCAAGGCTATAGACTCGTTGAATACATCAGTGTAGCGAGCGCGTGC 529 Query 179 GGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAA 238 ||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| Sbjct 528 GGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAATTTCATTGGCCTAAG 469 Query 239 AGGCCAT-CTCCCTCGAA 255 |||||| |||||| || Sbjct 468 CGGCCATAGTCCCTCTAA 451 >seq137008 Length=962 Score = 266 bits (294), Expect = 5e-69 Identities = 170/185 (92%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120 ||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||| | Sbjct 286 CTCGTTGAAGACCAACAATTGCAATGATCTATCTCCATCATGATGAAATTTCAAAGATAA 227 Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180 ||||| ||||||||||| | ||||||||||||||||||||||||||||| |||||||| Sbjct 226 CCCGGGTCTGTCGGCCAACGCTATAGACTCGTTGAATACATCAGTGTAGCGAGCGTGCGG 167 Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAAAG 240 ||||||||||||||||||||||||||||| ||||| |||||||||||| |||||||| Sbjct 166 CCCAGAACATCTAAGGGCATCACAGACCTATTATTACCTCAAACTTCCTTGGCCTAAGCT 107 Query 241 GCCAT 245 ||||| Sbjct 106 GCCAT 102 Score = 217 bits (240), Expect = 2e-54 Identities = 145/159 (91%), Gaps = 2/159 (1%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||| | ||||||||| ||||| ||||||||| |||||||||||| | | Sbjct 431 GTACAAAGGGCAGGAATGTAGTCAACTTGAGCT-GATGACTCGTGCTTACTAGGAACT-C 374 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 373 CTCGTTGAAGACCAACAATTGCAATGATCTATCTCCATCACGATGAAATTTCAAAGATTA 314 Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATAC 159 ||||| ||| |||||||||| |||||||||||||| || Sbjct 313 CCCGGGCCTATCGGCCAAGGCTATAGACTCGTTGAAGAC 275 >seq207379 Length=1491 Score = 123 bits (136), Expect = 4e-26 Identities = 71/73 (97%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 137 AAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGG 196 |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1489 AAGGCTATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGG 1430 Query 197 GCATCACAGACCT 209 ||||||||||||| Sbjct 1429 GCATCACAGACCT 1417 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 750433550160