Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fragaria_20nipponica_20[genbank_20GCA_5F000512025.1_202013-12-06] 215,024 sequences; 206,414,839 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq201911 134 4e-29 seq119403 104 7e-20 >seq201911 Length=6429 Score = 134 bits (148), Expect = 4e-29 Identities = 109/132 (83%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 |||| |||||| |||||||||||||||||||| | ||||||||| |||||||||| Sbjct 1553 TACGTTCGCAAGAATGAAACTCAAAGGAATTGACAAGAGCCCGCACAAATGGTGGAGCAT 1494 Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCTC 120 |||||||||||||| |||| ||||||||||||||||| |||||||| | || |||| Sbjct 1493 GTGGTTTAATTCGATGCAAAGCGAAGAACCTTACCAAGGCTTGACATGCCGCGATTCCTC 1434 Query 121 TAGAGATAGAGG 132 | || | ||||| Sbjct 1433 TTGAAAAAGAGG 1422 >seq119403 Length=3006 Score = 104 bits (114), Expect = 7e-20 Identities = 72/82 (88%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 156 ACAGGTGATGCATGGTTGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAAC 215 ||||||| ||||||| ||||||||||| ||| ||| || |||||||| |||||||||||| Sbjct 157 ACAGGTGGTGCATGGCTGTCGTCAGCTTGTGCCGTAAGGTGTTGGGTCAAGTCCCGCAAC 216 Query 216 GAGCGCAACCCTTAAGCTTAGT 237 ||||||||||||| | ||||| Sbjct 217 GAGCGCAACCCTTGTGTTTAGT 238 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1500766039040