Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fragaria_20nipponica_20[genbank_20GCA_5F000512025.1_202013-12-06]
215,024 sequences; 206,414,839 total letters
Query= AAMG01001634.1
Length=217
Score E
Sequences producing significant alignments: (Bits) Value
seq200453 80.6 3e-13
seq207401 77.0 4e-12
>seq200453
Length=799
Score = 80.6 bits (88), Expect = 3e-13
Identities = 78/98 (80%), Gaps = 2/98 (2%)
Strand=Plus/Minus
Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTAT-TCGGGCGTA 71
|||||| |||||| || | |||||| | |||| |||||||||||||| | | |||||
Sbjct 690 CCAACATAATAGG-ACCAAAATCCTATGATGTTATCCCATGCTAATGTATCTAGAGCGTA 632
Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109
|| |||||||| ||||||||||| |||| |||| ||
Sbjct 631 GGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAG 594
>seq207401
Length=2501
Score = 77.0 bits (84), Expect = 4e-12
Identities = 78/99 (79%), Gaps = 2/99 (2%)
Strand=Plus/Plus
Query 12 ACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTAT-TCGGGCGT 70
||||||| |||||| || | |||||| | |||| |||||||||||||| | | || |
Sbjct 460 ACCAACAGAATAGGACCGAAA-TCCTATGATGTTATCCCATGCTAATGTATCTAGAGCAT 518
Query 71 AAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109
| || |||||||| ||||||||||| |||| |||| ||
Sbjct 519 AGGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAG 557
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 593960171616
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |