Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fragaria_20nipponica_20[genbank_20GCA_5F000512025.1_202013-12-06] 215,024 sequences; 206,414,839 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq200453 80.6 3e-13 seq207401 77.0 4e-12 >seq200453 Length=799 Score = 80.6 bits (88), Expect = 3e-13 Identities = 78/98 (80%), Gaps = 2/98 (2%) Strand=Plus/Minus Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTAT-TCGGGCGTA 71 |||||| |||||| || | |||||| | |||| |||||||||||||| | | ||||| Sbjct 690 CCAACATAATAGG-ACCAAAATCCTATGATGTTATCCCATGCTAATGTATCTAGAGCGTA 632 Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109 || |||||||| ||||||||||| |||| |||| || Sbjct 631 GGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAG 594 >seq207401 Length=2501 Score = 77.0 bits (84), Expect = 4e-12 Identities = 78/99 (79%), Gaps = 2/99 (2%) Strand=Plus/Plus Query 12 ACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTAT-TCGGGCGT 70 ||||||| |||||| || | |||||| | |||| |||||||||||||| | | || | Sbjct 460 ACCAACAGAATAGGACCGAAA-TCCTATGATGTTATCCCATGCTAATGTATCTAGAGCAT 518 Query 71 AAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109 | || |||||||| ||||||||||| |||| |||| || Sbjct 519 AGGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAG 557 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593960171616