Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fragaria_20nipponica_20[genbank_20GCA_5F000512025.1_202013-12-06] 215,024 sequences; 206,414,839 total letters Query= AAMG01001962.1 Length=275 Score E Sequences producing significant alignments: (Bits) Value seq213183 114 2e-23 seq121107 89.7 8e-16 >seq213183 Length=1882 Score = 114 bits (126), Expect = 2e-23 Identities = 102/128 (80%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 148 ACGCCCACGACGGATAGGGACCGAACTGTCTCGCGACGTTCTGAACCCAGCTCGCGTGCC 207 |||||||| || ||| ||||||||||||||| |||||||||||||| ||||| || | Sbjct 1272 ACGCCCACACCGAATATGGACCGAACTGTCTCACGACGTTCTGAACCTAGCTCATGTACT 1331 Query 208 TCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACTTCAGCCCCAGGATGAGACGAGC 267 |||||||| | || || || ||| ||||| || ||| || ||||||| | || |||| Sbjct 1332 ACTTTAATGAGTGAGCAACCAAACTCTTGGAACATACCACAACCCCAGGTGGCGAAGAGC 1391 Query 268 CGACATCG 275 |||||||| Sbjct 1392 CGACATCG 1399 >seq121107 Length=809 Score = 89.7 bits (98), Expect = 8e-16 Identities = 58/64 (91%), Gaps = 0/64 (0%) Strand=Plus/Plus Query 165 GGACCGAACTGTCTCGCGACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACA 224 ||||||||||||||| ||||||| |||||||||||| ||| || |||||||||||||||| Sbjct 379 GGACCGAACTGTCTCACGACGTTTTGAACCCAGCTCACGTACCGCTTTAATGGGCGAACA 438 Query 225 GCCC 228 ||| Sbjct 439 ACCC 442 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 779173558464