Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fragaria_20nipponica_20[genbank_20GCA_5F000512025.1_202013-12-06]
215,024 sequences; 206,414,839 total letters
Query= AAMG01001962.1
Length=275
Score E
Sequences producing significant alignments: (Bits) Value
seq213183 114 2e-23
seq121107 89.7 8e-16
>seq213183
Length=1882
Score = 114 bits (126), Expect = 2e-23
Identities = 102/128 (80%), Gaps = 0/128 (0%)
Strand=Plus/Plus
Query 148 ACGCCCACGACGGATAGGGACCGAACTGTCTCGCGACGTTCTGAACCCAGCTCGCGTGCC 207
|||||||| || ||| ||||||||||||||| |||||||||||||| ||||| || |
Sbjct 1272 ACGCCCACACCGAATATGGACCGAACTGTCTCACGACGTTCTGAACCTAGCTCATGTACT 1331
Query 208 TCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACTTCAGCCCCAGGATGAGACGAGC 267
|||||||| | || || || ||| ||||| || ||| || ||||||| | || ||||
Sbjct 1332 ACTTTAATGAGTGAGCAACCAAACTCTTGGAACATACCACAACCCCAGGTGGCGAAGAGC 1391
Query 268 CGACATCG 275
||||||||
Sbjct 1392 CGACATCG 1399
>seq121107
Length=809
Score = 89.7 bits (98), Expect = 8e-16
Identities = 58/64 (91%), Gaps = 0/64 (0%)
Strand=Plus/Plus
Query 165 GGACCGAACTGTCTCGCGACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACA 224
||||||||||||||| ||||||| |||||||||||| ||| || ||||||||||||||||
Sbjct 379 GGACCGAACTGTCTCACGACGTTTTGAACCCAGCTCACGTACCGCTTTAATGGGCGAACA 438
Query 225 GCCC 228
|||
Sbjct 439 ACCC 442
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 779173558464
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |