Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fragaria_20nipponica_20[genbank_20GCA_5F000512025.1_202013-12-06] 215,024 sequences; 206,414,839 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq205788 104 4e-20 >seq205788 Length=686 Score = 104 bits (114), Expect = 4e-20 Identities = 99/123 (80%), Gaps = 3/123 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || ||| | | ||||||| | ||| || ||| || |||| Sbjct 283 GTACGAGAGGAACCGTTGA-TTC-GCACAATTGGTCATCGCGCTTGGTTGAAAAGCCAGT 340 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | |||||||||||| | ||||||||||| |||||||||||||||||||||||| || | Sbjct 341 GGCGCGAAGCTACCGGC-GCTGGATTATGACTGAACGCCTCTAAGTCAGAATCCGGGCTA 399 Query 121 GAA 123 ||| Sbjct 400 GAA 402 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 817493569536