Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fragaria_20nipponica_20[genbank_20GCA_5F000512025.1_202013-12-06] 215,024 sequences; 206,414,839 total letters Query= NC_007902.1 Length=52162 Score E Sequences producing significant alignments: (Bits) Value seq136675 87.8 6e-13 >seq136675 Length=3717 Score = 87.8 bits (96), Expect = 6e-13 Identities = 129/179 (72%), Gaps = 4/179 (2%) Strand=Plus/Plus Query 9116 CAGTTTTGGTCATACTCGCAAGGGCAACATGCCTTGATGGGGGATTGTGTTGACTGGTTC 9175 ||||| ||||| ||| || || || || || | ||||| || | || ||||||| | Sbjct 296 CAGTTCTGGTCCTACAGCCAGGGCCAGCACGCGATCATGGGCGACAGCGTCGACTGGTAC 355 Query 9176 CATATTGACGAAGAGCC--AAGAGATCCGACGATTTATCCGCAGGTGCTGACGCGGACCG 9233 || || ||||||||||| |||| | || ||| || |||||||| | || ||||||| Sbjct 356 CACATCGACGAAGAGCCCGAAGACA-AAGA-GATCTACCCGCAGGTCATCACCCGGACCG 413 Query 9234 CCACCGGCGATCGGGGAAAGGGCGGTCGCGGCATTCTAACGTTTACGCCGGAAAACGGA 9292 |||| ||||| || || ||||| || ||||| | || || || || || |||||| Sbjct 414 CCACTGGCGACCGTGGGCGAGGCGGGCGGGGCATCTTGACCTTCACCCCAGAGAACGGA 472 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 166370899382912