Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fragaria_20nipponica_20[genbank_20GCA_5F000512025.1_202013-12-06] 215,024 sequences; 206,414,839 total letters Query= NC_011356.1 Length=54896 Score E Sequences producing significant alignments: (Bits) Value seq74093 82.4 3e-11 >seq74093 Length=385 Score = 82.4 bits (90), Expect = 3e-11 Identities = 134/193 (69%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 28942 GGCAAGCAGTACAAGGCGGAGGACATGTTACGTGAAGCCATCGGTGGCCTTGCCTCCCGC 29001 ||||||||| |||| ||| | | ||| | || |||| ||| ||||| || || ||| Sbjct 2 GGCAAGCAGGCCAAGTCGGCGAAGATGCTGGTCGAGGCCACCGGCGGCCTGGCGTCACGC 61 Query 29002 CCGGAAGGGTTTGTGGTGTATACGACCACCCAGTCGAATGAACCTCCCGCCGGGGTGTTC 29061 || || ||||| || | || ||||||||||| |||| || || ||||| | ||| Sbjct 62 CCAGAGGGGTTCGTTTTCTACTGCACCACCCAGTCCGATGAGCCGCCGGCCGGCGCCTTC 121 Query 29062 AGACAGAAACTGCAGTACGCCCGGGATGTGCGCGACGGCAAAATTCATGATCCGCACTTT 29121 | || ||| | ||||| || | ||||| ||||| | || | || | | ||| Sbjct 122 AAGGCCAAGCTGGACTACGCGCGCAAAGTGCGTGACGGGGAGATCGAGGACCGACGCTTC 181 Query 29122 CTGCCGGTGATCT 29134 ||||||||||||| Sbjct 182 CTGCCGGTGATCT 194 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 175097360109504