Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fragaria_20nubicola_20[genbank_20GCA_5F000511995.1_202013-12-06] 210,780 sequences; 203,686,407 total letters Query= AAMG01000538.1 Length=248 Score E Sequences producing significant alignments: (Bits) Value seq117200 98.7 1e-18 >seq117200 Length=3590 Score = 98.7 bits (108), Expect = 1e-18 Identities = 88/109 (81%), Gaps = 1/109 (1%) Strand=Plus/Plus Query 141 GGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTT-AACCACAGTTCAC 199 ||||||||||||||||||||||||||| |||||||| || |||||| || | |||| | Sbjct 3394 GGCACCCCTTCTCCCGAAGTTACGGGGTCATTTTGCTGAGTTCCTTCGACAATGGTTCTC 3453 Query 200 CCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACGGTA 248 | | |||| |||||| || ||| || |||||||||| |||| |||| Sbjct 3454 TCAAGCGCCCTAGTATACTATACTTGTTCACCTGTGTCAGTTTGGGGTA 3502 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 692982082940