Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fragaria_20nubicola_20[genbank_20GCA_5F000511995.1_202013-12-06] 210,780 sequences; 203,686,407 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq169444 141 3e-31 seq812 107 6e-21 >seq169444 Length=2898 Score = 141 bits (156), Expect = 3e-31 Identities = 119/145 (82%), Gaps = 1/145 (1%) Strand=Plus/Minus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 |||| |||||| |||||||||||||||||||||||| |||| |||||||||||||||| Sbjct 213 TACGTTCGCAAGAATGAAACTCAAAGGAATTGACGGGGGCCCGTACAAGCGGTGGAGCAT 154 Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCTC 120 |||||||||||||| |||| || ||||||||||||| | |||||| | || |||| Sbjct 153 GTGGTTTAATTCGATGCAAAGCAAAGAACCTTACCAGGGCATGACATGCCGCGAATCCTC 94 Query 121 TAGAGATAGAGGTTTCCCCTTCGGG 145 | || | ||||| | |||||||| Sbjct 93 TTGAAAAAGAGGGGT-GCCTTCGGG 70 >seq812 Length=2997 Score = 107 bits (118), Expect = 6e-21 Identities = 73/82 (89%), Gaps = 0/82 (0%) Strand=Plus/Minus Query 156 ACAGGTGATGCATGGTTGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAAC 215 ||||||| ||||||| ||||||||||| ||| ||| || ||||||||||||||||||||| Sbjct 111 ACAGGTGGTGCATGGCTGTCGTCAGCTTGTGCCGTAAGGTGTTGGGTTAAGTCCCGCAAC 52 Query 216 GAGCGCAACCCTTAAGCTTAGT 237 ||||||||||||| | ||||| Sbjct 51 GAGCGCAACCCTTGTGTTTAGT 30 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1500829868800