Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fragaria_20nubicola_20[genbank_20GCA_5F000511995.1_202013-12-06] 210,780 sequences; 203,686,407 total letters Query= AAMG01001178.1 Length=367 Score E Sequences producing significant alignments: (Bits) Value seq203273 143 6e-32 >seq203273 Length=1923 Score = 143 bits (158), Expect = 6e-32 Identities = 102/117 (87%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 82 CTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAG 141 || |||||||||||||||||| |||||||||| | | |||||| |||||||||||||| | Sbjct 1853 CTACCTCCCGTAGGAGTCTGGGCCGTGTCTCAATCCTAGTGTGGCTGATCATCCTCTCGG 1794 Query 142 ACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATCCGAC 198 ||||| ||| |||| ||||||| || ||| ||| ||||||||||||||||||| ||| Sbjct 1793 ACCAGCTACTGATCATCGCCTTAGTAAGCTATTGCCTCACCAACTAGCTAATCAGAC 1737 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1069740438400