Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fragaria_20nubicola_20[genbank_20GCA_5F000511995.1_202013-12-06] 210,780 sequences; 203,686,407 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq12796 84.2 1e-14 seq147352 75.2 7e-12 >seq12796 Length=984 Score = 84.2 bits (92), Expect = 1e-14 Identities = 62/70 (89%), Gaps = 2/70 (3%) Strand=Plus/Plus Query 43 AAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCA 102 |||| |||||||| |||| || ||||||||| ||||||||||| |||||||||||||| Sbjct 539 AAAGACCTCACTAAAACATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCA 596 Query 103 GGGACGTAAT 112 |||||||||| Sbjct 597 GGGACGTAAT 606 >seq147352 Length=942 Score = 75.2 bits (82), Expect = 7e-12 Identities = 56/63 (89%), Gaps = 2/63 (3%) Strand=Plus/Plus Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAA 121 |||| ||||||| | ||||||||||| |||||||||||||||||||||| | |||||| | Sbjct 175 TTCAATCGGTAGGA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAGT-CAACGCGA 232 Query 122 GCT 124 ||| Sbjct 233 GCT 235 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300205600400