Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fragaria_20nubicola_20[genbank_20GCA_5F000511995.1_202013-12-06] 210,780 sequences; 203,686,407 total letters Query= AAMG01001432.1 Length=344 Score E Sequences producing significant alignments: (Bits) Value seq203273 127 4e-27 >seq203273 Length=1923 Score = 127 bits (140), Expect = 4e-27 Identities = 105/128 (82%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 48 CTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAG 107 || ||||||||||||||||||||||||||||| ||| | |||||| | ||| |||||| | Sbjct 1853 CTACCTCCCGTAGGAGTCTGGGCCGTGTCTCAATCCTAGTGTGGCTGATCATCCTCTCGG 1794 Query 108 TCCGGCTACCGATCGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCG 167 || ||||| |||| ||| ||| || |||||| ||||||||||| |||||| | | || Sbjct 1793 ACCAGCTACTGATCATCGCCTTAGTAAGCTATTGCCTCACCAACTAGCTAATCAGACACG 1734 Query 168 AGCCCATC 175 ||||| || Sbjct 1733 AGCCCCTC 1726 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 996295572480