Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fragaria_20nubicola_20[genbank_20GCA_5F000511995.1_202013-12-06] 210,780 sequences; 203,686,407 total letters Query= AAMG01002180.1 Length=500 Score E Sequences producing significant alignments: (Bits) Value seq203273 127 6e-27 >seq203273 Length=1923 Score = 127 bits (140), Expect = 6e-27 Identities = 100/120 (83%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 160 CGCGTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGAC 219 || ||||||||||||||||||| ||| || |||||| ||||||| |||||||||| | Sbjct 1734 CGTGTCTGATTAGCTAGTTGGTGAGGCAATAGCTTACTAAGGCGATGATCAGTAGCTGGT 1793 Query 220 CTGAGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAG 279 | |||||| ||||| |||||| | | | |||||||||| ||| |||||||||||||| || Sbjct 1794 CCGAGAGGATGATCAGCCACACTAGGATTGAGACACGGCCCAGACTCCTACGGGAGGTAG 1853 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1494443358720