Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fragaria_20orientalis_20[genbank_20GCA_5F000517285.1_202013-12-06] 323,163 sequences; 214,184,023 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq313723 87.8 5e-15 >seq313723 Length=924 Score = 87.8 bits (96), Expect = 5e-15 Identities = 141/202 (70%), Gaps = 7/202 (3%) Strand=Plus/Plus Query 295 GGGGACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGA 354 |||||| | | ||| |||||||| | | || |||||||| |||||| ||| | Sbjct 458 GGGGACAAAGACAAGTCATCATGGTCTTAATACCGCGGGCTACAGACGTGCCACATTTTC 517 Query 355 CAATACAAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTC 414 | | |||||| | || ||| | || | |||| |||| || ||| | | | || Sbjct 518 CTAGACAAAGAGATGCAAAAATGTGAATTTAAGCTAATCTCAAAAAATAGGATAAAATTT 577 Query 415 -----GGATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGAT 469 ||||||||||||| |||||||||||||||| | ||| |||||||||||| || Sbjct 578 TATATGGATTGTAGTCTGAAACTCGACTATATGAAAAAGTAATTGCTAGTAATCGTGAAT 637 Query 470 CAGC--ATGCTACGGTGAATAC 489 || | ||| ||||||||||| Sbjct 638 CACCATATGTCACGGTGAATAC 659 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1499139628480