Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fragaria_20orientalis_20[genbank_20GCA_5F000517285.1_202013-12-06] 323,163 sequences; 214,184,023 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq169933 192 1e-46 seq283637 165 1e-38 >seq169933 Length=1127 Score = 192 bits (212), Expect = 1e-46 Identities = 140/161 (87%), Gaps = 1/161 (1%) Strand=Plus/Minus Query 134 ATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTG 193 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| | Sbjct 537 ATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGCTATGAACGCTTGGCCG 478 Query 194 CCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAA-TTTCGAGG 252 |||||||||||||||||||||||||||||||||| ||||||| | | ||| | || | Sbjct 477 CCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTTGATTGAAACTCTCAATA 418 Query 253 GACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 | |||||||||||||||| | ||||| ||| |||||| Sbjct 417 ATCAAAAGGATCGATAGGCCCCGCTTTCGCGGTCCGTATTC 377 >seq283637 Length=531 Score = 165 bits (182), Expect = 1e-38 Identities = 119/137 (87%), Gaps = 1/137 (1%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 ||||| | ||||||| |||| | | || ||||||||||||||||||||||||||||||| Sbjct 136 TACTATGTTGAATTACTATTGCGAC-ACTGTCATCAGTAGGGTAAAACTAACCTGTCTCA 78 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 ||||||||||||| ||||||||||||||||| |||||||||||||||||| ||| || Sbjct 77 CGACGGTCTAAACCTAGCTCACGTTCCCTATTGGTGGGTGAACAATCCAACACTTGGTGA 18 Query 121 ATTCTGCTTCNNNATGA 137 |||||||||| |||| Sbjct 17 ATTCTGCTTCACAATGA 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 851638895328