Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fragaria_20orientalis_20[genbank_20GCA_5F000517285.1_202013-12-06] 323,163 sequences; 214,184,023 total letters Query= AAMG01002180.1 Length=500 Score E Sequences producing significant alignments: (Bits) Value seq162645 87.8 5e-15 >seq162645 Length=1805 Score = 87.8 bits (96), Expect = 5e-15 Identities = 68/81 (84%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 160 CGCGTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGAC 219 || ||||||||||||||||||| ||| || |||||| ||||||| |||||||||| | Sbjct 83 CGTGTCTGATTAGCTAGTTGGTGAGGCAATAGCTTACTAAGGCGATGATCAGTAGCTGGT 24 Query 220 CTGAGAGGGTGATCGGCCACA 240 | |||||| ||||| |||||| Sbjct 23 CCGAGAGGATGATCAGCCACA 3 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1492760310912