Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fragaria_20orientalis_20[genbank_20GCA_5F000517285.1_202013-12-06] 323,163 sequences; 214,184,023 total letters Query= NC_031903.1 Length=172345 Score E Sequences producing significant alignments: (Bits) Value seq171293 96.9 4e-15 >seq171293 Length=1713 Score = 96.9 bits (106), Expect = 4e-15 Identities = 137/190 (72%), Gaps = 2/190 (1%) Strand=Plus/Plus Query 160975 CTTGACGCTGCTGATGAAGCAGGTGTTGACGGACCCTACTCCTGTCGTGCTGGTGCTTGC 161034 || ||||| || || || |||||| | ||| || ||||||||||| || ||| | ||| Sbjct 1292 CTCGACGCCGCCGAGGAGGCAGGTCTCGACCTCCCTTACTCCTGTCGCGCCGGTTCCTGC 1351 Query 161035 TCTACTTGTGCTGGTAAGATTGAGAGTGGTACTGTAGATCAATCTGATCA-ATCTTTCCT 161093 ||| | || || || ||| ||| ||| || || || || ||||| || | |||| || Sbjct 1352 TCTTCCTGCGCCGGCAAGGTTGTTGATGGCACCGTCGACCAGTCTGACCAGAGCTTT-CT 1410 Query 161094 GGATGATGATCAACTTGAATCAGGATTTGTCCTGACCTGCGTTGCTTATCCCACTTCTGA 161153 |||||||| || |||| || |||||||| || || || || ||||| | ||||| Sbjct 1411 TGATGATGACCAGATTGATGGTGGCTTTGTCCTCACTTGTGTCGCCTATCCTTCCTCTGA 1470 Query 161154 TGTAACTATT 161163 ||| ||| || Sbjct 1471 TGTTACTCTT 1480 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 549148695971400