Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fragaria_20vesca_20subsp._20vesca_20[refseq_20GCF_5F000184155.1_2020
11-02-24] 3,048 sequences; 214,373,013 total letters
Query= AAMG01000753.1
Length=364
Score E
Sequences producing significant alignments: (Bits) Value
seq3048 338 1e-90
seq2865 331 2e-88
seq936 331 2e-88
seq673 329 7e-88
seq2671 288 2e-75
seq6 286 7e-75
seq1027 253 4e-65
>seq3048
Length=155691
Score = 338 bits (374), Expect = 1e-90
Identities = 289/353 (82%), Gaps = 8/353 (2%)
Strand=Plus/Minus
Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66
|||||||||| | || | ||||||||||| || | ||||||||||||| ||||||
Sbjct 107967 GCATCTTCACAGACATGTCTATTTCACCGAGCCTCTCTCCGAGACAGTGCCCAGATCGTT 107908
Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 107907 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 107848
Query 127 TAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGAT-TGCTC---TAACAG 182
||||||||||||||||| || ||||||| || | ||| | | | || | ||
Sbjct 107847 TAGTTACGGCCGCCGTTCACCGGGGCTTCGGTCGCCGGCTCCCCTGTCATCAGGTCACCA 107788
Query 183 ATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTA 242
| |||| ||||||| |||| |||||||||||||| || |||||| ||||| ||||||
Sbjct 107787 ACTTCCTTGACCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTACGACTTT 107728
Query 243 GCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCG---GCCTGTCA 299
|| || ||||||||||||||||||||||||| |||||| || ||||| ||| |
Sbjct 107727 GCGGAGACCTGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCGACCCCCTTTGT 107668
Query 300 TAGACAGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTA 352
|| |||||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct 107667 GAG-GAGGCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTCCTTA 107616
Score = 338 bits (374), Expect = 1e-90
Identities = 289/353 (82%), Gaps = 8/353 (2%)
Strand=Plus/Plus
Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66
|||||||||| | || | ||||||||||| || | ||||||||||||| ||||||
Sbjct 133331 GCATCTTCACAGACATGTCTATTTCACCGAGCCTCTCTCCGAGACAGTGCCCAGATCGTT 133390
Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 133391 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 133450
Query 127 TAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGAT-TGCTC---TAACAG 182
||||||||||||||||| || ||||||| || | ||| | | | || | ||
Sbjct 133451 TAGTTACGGCCGCCGTTCACCGGGGCTTCGGTCGCCGGCTCCCCTGTCATCAGGTCACCA 133510
Query 183 ATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTA 242
| |||| ||||||| |||| |||||||||||||| || |||||| ||||| ||||||
Sbjct 133511 ACTTCCTTGACCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTACGACTTT 133570
Query 243 GCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCG---GCCTGTCA 299
|| || ||||||||||||||||||||||||| |||||| || ||||| ||| |
Sbjct 133571 GCGGAGACCTGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCGACCCCCTTTGT 133630
Query 300 TAGACAGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTA 352
|| |||||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct 133631 GAG-GAGGCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTCCTTA 133682
>seq2865
Length=1011
Score = 331 bits (366), Expect = 2e-88
Identities = 289/354 (82%), Gaps = 9/354 (3%)
Strand=Plus/Minus
Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66
|||||||||| | || | ||||||||||| || | ||||||||||||| ||||||
Sbjct 847 GCATCTTCACAGACATGTCTATTTCACCGAGCCTCTCTCCGAGACAGTGCCCAGATCGTT 788
Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 787 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 728
Query 127 TAGTTACGG-CCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGAT-TGCTC---TAACA 181
||||||||| |||||||| || ||||||| || | ||| | | | || | ||
Sbjct 727 TAGTTACGGTCCGCCGTTCACCGGGGCTTCGGTCGCCGGCTCCCCTGTCATCAGGTCACC 668
Query 182 GATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTT 241
| |||| ||||||| |||| |||||||||||||| || |||||| ||||| ||||||
Sbjct 667 AACTTCCTTGACCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTACGACTT 608
Query 242 AGCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCG---GCCTGTC 298
|| || ||||||||||||||||||||||||| |||||| || ||||| ||| |
Sbjct 607 TGCGGAGACCTGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCGACCCCCTTTG 548
Query 299 ATAGACAGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTA 352
|| |||||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct 547 TGAG-GAGGCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTCCTTA 495
>seq936
Length=1037
Score = 331 bits (366), Expect = 2e-88
Identities = 289/354 (82%), Gaps = 9/354 (3%)
Strand=Plus/Minus
Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66
|||||||||| | || | ||||||||||| || | ||||||||||||| ||||||
Sbjct 832 GCATCTTCACAGACATGTCTATTTCACCGAGCCTCTCTCCGAGACAGTGCCCAGATCGTT 773
Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 772 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 713
Query 127 TAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGAT-TGCTC---TAACAG 182
||||||||||||||||| || ||||||| || | ||| | | | || | ||
Sbjct 712 TAGTTACGGCCGCCGTTCACCGGGGCTTCGGTCGCCGGCTCCCCTGTCATCAGGTCACCA 653
Query 183 ATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTA 242
| |||| ||||||| |||| |||||||||||||| || |||||| ||||| ||||||
Sbjct 652 ACTTCCTTGACCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTACGACTTT 593
Query 243 GCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCG---GCCTGTCA 299
|| || ||||||||||||||||||||||||| |||||| || ||||| ||| |
Sbjct 592 GCGGAGACCTGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCGACCCCCTTTGT 533
Query 300 TAGACAGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCG-AGTTCCTTA 352
|| |||||||||||||||| ||||||||||| ||||||||| |||||||||
Sbjct 532 GAG-GAGGCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGTAGTTCCTTA 480
>seq673
Length=1060
Score = 329 bits (364), Expect = 7e-88
Identities = 288/353 (82%), Gaps = 9/353 (3%)
Strand=Plus/Minus
Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66
|||||||||| | || | ||||||||||| || | ||||||||||||| ||||||
Sbjct 867 GCATCTTCACAGACATGTCTATTTCACCGAGCCTCTCTCCGAGACAGTGCCCAGATCGTT 808
Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 807 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 748
Query 127 TAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGAT-TGCTC---TAACAG 182
||||||||||||||||| || ||||||| || | ||| | | | || | ||
Sbjct 747 TAGTTACGGCCGCCGTTCACCGGGGCTTCGGTCGCCGGCTCCCCTGTCATCAGGTCACCA 688
Query 183 ATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTA 242
| |||| ||||||| |||| |||||||||||||| || |||||| ||||| ||||||
Sbjct 687 ACTTCCTTGACCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTACGACTTT 628
Query 243 GCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCG---GCCTGTCA 299
|| || ||||||||||||||||||||||||| |||||| || ||||| ||| |
Sbjct 627 GCGGAGACCTGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCGACCCCCTTTGT 568
Query 300 TAGACAGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTA 352
|| |||||||||||||||| || |||||||| ||||||||||||||||||
Sbjct 567 GAG-GAGGCACCCCTTCTCCCGAA-TTACGGGGCTATTTTGCCGAGTTCCTTA 517
>seq2671
Length=1330
Score = 288 bits (318), Expect = 2e-75
Identities = 240/292 (82%), Gaps = 4/292 (1%)
Strand=Plus/Minus
Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66
|||||||||| | || | ||||||||||| || | ||||||||||||| ||||||
Sbjct 313 GCATCTTCACAGACATGTCTATTTCACCGAGCCTCTCTCCGAGACAGTGCCCAGATCGTT 254
Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 253 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 194
Query 127 TAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGAT-TGCTC---TAACAG 182
||||||||||||||||| || ||||||| || | ||| | | | || | ||
Sbjct 193 TAGTTACGGCCGCCGTTCACCGGGGCTTCGGTCGCCGGCTCCCCTGTCATCAGGTCACCA 134
Query 183 ATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTA 242
| |||| ||||||| |||| |||||||||||||| || |||||| ||||| ||||||
Sbjct 133 ACTTCCTTGACCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTACGACTTT 74
Query 243 GCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCC 294
|| || ||||||||||||||||||||||||| |||||| || ||||| ||
Sbjct 73 GCGGAGACCTGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCGACC 22
>seq6
Length=38222195
Score = 286 bits (316), Expect = 7e-75
Identities = 278/355 (78%), Gaps = 12/355 (3%)
Strand=Plus/Plus
Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66
||||||||| | || | ||||||||||| || | ||||||||||||| ||||||
Sbjct 14173242 GCATCTTCATAGACATGTCTATTTCACCGAGCCTCTCTCCGAGACAGTGCCCAGATCGTT 14173301
Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 126
||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||
Sbjct 14173302 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTTGCTACCTTAGGACTGTTA 14173361
Query 127 TAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCT------TCGATTGCTCTAAC 180
|||||| || | ||||| || |||||| || | ||| || | | || ||
Sbjct 14173362 TAGTTATGGTCACCGTTCACCCGGGCTTCGGTCGCCGGCTCTCCTGTCATTAGGTC--AC 14173419
Query 181 AGATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACT 240
| |||| ||||||| |||| ||||||||||| || || ||| || ||||| |||||
Sbjct 14173420 CAACTTCCTTGACCTTCCGGCACTGGGCAGGCGTCCGCCCCCATATATAGTCTTACGACT 14173479
Query 241 TAGCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCG---GCCTGT 297
| || || ||||||||||||||||||||||||| |||||| || || || ||| |
Sbjct 14173480 TTGCGGAGACCTGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTACGACCCCCTTT 14173539
Query 298 CATAGACAGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTA 352
|| |||||||||||||||| ||||||| ||| ||||||||||||||||||
Sbjct 14173540 GTGAG-GAGGCACCCCTTCTCCCGAAGTTACAGGGCTATTTTGCCGAGTTCCTTA 14173593
Score = 82.4 bits (90), Expect = 2e-13
Identities = 55/60 (92%), Gaps = 1/60 (2%)
Strand=Plus/Plus
Query 306 GGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTT-AACAATAGTTCTC 364
||||||||||||||| |||||||||||||||||||| ||||||||| ||||| ||||||
Sbjct 1034307 GGCACCCCTTCTCCCGAAGTTACGGGGTCATTTTGCTGAGTTCCTTCGACAATGGTTCTC 1034366
>seq1027
Length=1020
Score = 253 bits (280), Expect = 4e-65
Identities = 212/258 (82%), Gaps = 4/258 (2%)
Strand=Plus/Plus
Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66
|||||||||| | || | ||||||||||| || | ||||||||||||| ||||||
Sbjct 763 GCATCTTCACAGACATGTCTATTTCACCGAGCCTCTCTCCGAGACAGTGCCCAGATCGTT 822
Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 823 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 882
Query 127 TAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGAT-TGCTC---TAACAG 182
||||||||||||||||| || ||||||| || | ||| | | | || | ||
Sbjct 883 TAGTTACGGCCGCCGTTCACCGGGGCTTCGGTCGCCGGCTCCCCTGTCATCAGGTCACCA 942
Query 183 ATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTA 242
| |||| ||||||| |||| |||||||||||||| || |||||| ||||| ||||||
Sbjct 943 ACTTCCTTGACCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTACGACTTT 1002
Query 243 GCAGAAACCTGTGTTTTT 260
|| || ||||||||||||
Sbjct 1003 GCGGAGACCTGTGTTTTT 1020
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1062367618048
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