Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fragaria_20vesca_20subsp._20vesca_20[refseq_20GCF_5F000184155.1_2020 11-02-24] 3,048 sequences; 214,373,013 total letters Query= NC_031903.1 Length=172345 Score E Sequences producing significant alignments: (Bits) Value seq3048 610 7e-170 seq2811 504 8e-138 seq2823 396 3e-105 seq838 360 2e-94 seq929 329 4e-85 seq990 251 8e-62 seq1012 174 2e-38 seq5 96.9 4e-15 >seq3048 Length=155691 Score = 610 bits (676), Expect = 7e-170 Identities = 720/972 (74%), Gaps = 2/972 (0%) Strand=Plus/Minus Query 159824 ACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTCCTGATGATCCCAACTCTGTTGGCA 159883 ||| | ||||| || || | || ||||| || || |||||||||| ||| | ||| | Sbjct 1396 ACCGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACTTTATTGACC 1337 Query 159884 GCAACTATCTGC-TTCATCGTCGCCTTCATCGCTGCTCCCCCTGTGGACATCGATGGCAT 159942 |||||| |||| || || | || ||||| ||||| || || || || || ||||| || Sbjct 1336 GCAACT-TCTGTATTTATTATTGCTTTCATTGCTGCACCTCCGGTAGATATTGATGGTAT 1278 Query 159943 CCGTGAACCCGTCGCTGGTTCACTCATGTACGGTAACAACATCATCTCTGGTGCAGTTGT 160002 |||||||| || |||| || | | ||||| ||||| || || || ||||| || | Sbjct 1277 TCGTGAACCTGTTTCTGGATCTTTACTTTACGGAAACAATATTATTTCCGGTGCCATTAT 1218 Query 160003 TCCCTCTTCCAACGCAATTGGTCTTCACTTCTATCCCATTTGGGAAGCCGCATCGCTCGA 160062 || |||| || || ||| | ||||| || || || |||||||| || || | || Sbjct 1217 CCCTACTTCTGCAGCTATAGGTTTGCACTTTTACCCAATATGGGAAGCGGCTTCTGTTGA 1158 Query 160063 CGAGTGGCTCTATAACGGTGGTCCTTTCCAACTCGTAGTCTTCCACTTCCTGATCGGCAT 160122 || ||| | || |||||||| |||| | || | || | |||||| | | || | Sbjct 1157 TGAATGGTTATACAACGGTGGCCCTTATGAGCTAATTGTTCTACACTTCTTACTTGGTGT 1098 Query 160123 CTATGCCTATATGGGTCGTGAGTGGGAACTCTCTTACCGTCTCGGTATGCGTCCCTGGAT 160182 | |||||||||||||||||||||||| || |||||| |||||||| || ||||| Sbjct 1097 AGCTTGCTATATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGCCCTTGGAT 1038 Query 160183 CTGTGTTGCATACTCTGCTCCAGTCGCTGCTGCTTCTGCTGTATTCCTCGTCTACCCCTT 160242 ||||||||| || ||||| || || |||||| ||||||| ||| | ||||||| | Sbjct 1037 TGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATCTACCCAAT 978 Query 160243 CGGTCAGGGTTCTTTCTCCGATGCTATGCCTCTTGGTATCTCTGGTACTTTTAACTATAT 160302 ||||| || || || || | ||||||||| || |||||||||||||| |||| || Sbjct 977 TGGTCAAGGAAGCTTTTCTGACGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTCAT 918 Query 160303 GCTTGTATTCCAAGCAGAACACAATATCCTTATGCATCCGTTCCACATGCTCGGTGTTGC 160362 | ||||||||||||| || ||||| ||||||||||| || || |||||||| ||||| || Sbjct 917 GATTGTATTCCAAGCTGAGCACAACATCCTTATGCACCCATTTCACATGCTAGGTGTGGC 858 Query 160363 TGGGGTATTCGGTGGATCTCTGTTCTCTGCTATGCATGGATCTCTGGTTACTTCTAGTCT 160422 ||| ||||| || || || || ||| |||||||||||| ||| |||| || |||||| | Sbjct 857 TGGTGTATTTGGCGGTTCCCTATTCAGTGCTATGCATGGTTCTTTGGTAACCTCTAGTTT 798 Query 160423 CGTCAGAGAGACGACAGAAACTGAGTCCCAGAACTATGGTTACAAGTTCGGTCAAGAGGA 160482 |||| || || ||||||| ||| || || | ||||||| |||||||||||||| Sbjct 797 GATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGA 738 Query 160483 AGAGACTTACAACATCGTCGCAGCACATGGCTACTTCGGTCGTTTGATCTTCCAATATGC 160542 ||| || || || ||||| || || ||||| || || || || ||||||||||||||||| Sbjct 737 AGAAACCTATAATATCGTAGCCGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGC 678 Query 160543 ATCCTTTAACAACTCACGCTCTCTGCACTTCTTCCTCGCTGCTTGGCCTGTTGTTGGAAT 160602 || ||||| || || ||| | ||||||||| | |||||||||||||| || || || Sbjct 677 TAGTTTCAACAATTCTCGTTCTTTACACTTCTTCTTAGCTGCTTGGCCTGTAGTAGGTAT 618 Query 160603 CTGGTTCACTGCCCTTGGTGTTTCTACCATGGCATTCAATCTCAATGGTTTCAACTTCAA 160662 ||||||||| || | ||| | || ||||| ||||| | |||||||| || ||||| Sbjct 617 CTGGTTCACCGCTTTAGGTATCAGCACTATGGCTTTCAACTTAAATGGTTTTAATTTCAA 558 Query 160663 CCAGTCCATCTTGGACAACCAAGGACAAGTTCTGAACACTTGGGCAGACGTGCTTAACCG 160722 || || | | || | ||||| | || | || |||||||| || | | ||||| Sbjct 557 TCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATACTTGGGCTGATATTATCAACCG 498 Query 160723 CGCTGGTCTGGGCATGGAAGTCATGCACGAGCGTAACGCTCACAACTTCCCTCTCGACCT 160782 |||| ||| || |||||||| ||||| || ||||| ||||| || |||||||| ||||| Sbjct 497 CGCTAATCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAATTTCCCTCTAGACCT 438 Query 160783 TGCTGCTGCTGA 160794 ||||||| ||| Sbjct 437 AGCTGCTGTTGA 426 Score = 556 bits (616), Expect = 1e-153 Identities = 723/993 (73%), Gaps = 5/993 (1%) Strand=Plus/Plus Query 161545 GATCGTTTCGTTTTTGTTGGCTGGTCTGGACTTCTTCTTTTTCCCACTGCTTATCTTGCT 161604 || |||||||||||||| || |||||||| || | || ||||| ||| ||| | ||| Sbjct 33701 GACCGTTTCGTTTTTGTAGGTTGGTCTGGCCTATTGCTCTTTCCTTGTGCCTATTTCGCT 33760 Query 161605 ATTGGCGGTTGGCTTACTGGCACGACTTTCGCTACGAGCTGGTATACCCATGGACTCGCT 161664 | || |||||| | || || || || || | || ||||||||||||||| | || Sbjct 33761 TTAGGGGGTTGGTTCACAGGTACAACCTTTGTAACTTCATGGTATACCCATGGATTAGCA 33820 Query 161665 AGTTCCTATCTTGAGGGTGCAAATTTTCTTACAGCGGCAGTTAGCACTCCAGCTGACGCT 161724 ||||||||| | || ||| || || | || || |||||| ||| || ||| || | Sbjct 33821 AGTTCCTATTTGGAAGGTTGTAACTTCTTAACCGCCGCAGTTTCCACCCCTGCTAACAGT 33880 Query 161725 ATGGGTCATTCTCTTCTTCTT-CTCTGGGGTCCTGAGGCTCAAGGGGATTTCGTCAGGTG 161783 | | || ||| || || || || ||||||||||| || ||||| ||||| | || Sbjct 33881 TTAGCACACTCT-TTGTTGTTACTATGGGGTCCTGAAGCACAAGGAGATTTTACTCGTTG 33939 Query 161784 GATCCAACTTGGGGGACTCTGGAATTTTGTGGCGCTCCACGGGGCTTTCGCTCTGATTGG 161843 | ||| | || || || |||| ||||| || || ||||| ||||||| || || || Sbjct 33940 GTGTCAATTGGGCGGTCTGTGGACCTTTGTCGCTCTGCACGGCGCTTTCGGACTAATAGG 33999 Query 161844 ATTCATGCTTCGTCAGTTTGAACTTGCTCG-TCTTATCGGTATCCGTCCTTACAATGCTA 161902 |||||| | ||||| |||||||||||||| ||| || | | || ||||| ||||| | Sbjct 34000 TTTCATGTTACGTCAATTTGAACTTGCTCGATCTGTTCAAT-TACGACCTTATAATGCAA 34058 Query 161903 TTGCTTTCTCTGGTCCTATTGCTGTTTTTGTCAGCGTCTTTCTCATATATCCTCTGGGAC 161962 |||| ||||| ||||| |||||||||||||| || || || || ||||| || || | Sbjct 34059 TTGCATTCTCCGGTCCAATTGCTGTTTTTGTTTCTGTATTCCTGATTTATCCGCTAGGTC 34118 Query 161963 AGTCGTCCTGGTTCTTCGCGCCATCGTTTGGGGTTGCCGCTATTTTCAGGTTCTTACTTT 162022 |||| |||||||| ||||| ||||| || || ||||| || | ||| | || | Sbjct 34119 AGTCTGGTTGGTTCTTTGCGCCCAGTTTTGGTGTAGCAGCTATATTTCGATTCATCCTCT 34178 Query 162023 TCCTACAAGGTTTCCACAATTGGACGCTTAATCCGTTCCACATGATGGGTGTCGCAGGTA 162082 | | ||||| || || |||||||| | || || || || |||||||| || || || Sbjct 34179 TTTTCCAAGGGTTTCATAATTGGACATTGAACCCATTTCATATGATGGGAGTTGCTGGGG 34238 Query 162083 TCTTGGGTGGTGCTTTGCTCTCTGCTATTCACGGTGTGACTGTTGAAAACACGCTCTACC 162142 | ||||| | |||| || | | |||||||| |||| || || ||||| || | | Sbjct 34239 TGTTGGGCGCTGCTCTGTTATGCGCTATTCATGGTGCTACCGTAGAAAATACTTTATTTG 34298 Query 162143 AAGATGGTGAACAAGCAAATACTTTCAAGGCTTTTGACTCTACGCAAGAGGAGGAGACTT 162202 |||||||||| |||||||| ||| |||||| || | || |||| || || |||| Sbjct 34299 AAGATGGTGATGGTGCAAATACATTCCGTGCTTTTAACCCAACTCAAGCTGAAGAAACTT 34358 Query 162203 ACTCGATGGTTACTGCGAACCGTTTCTGGTCACAGATCTTCGGTATTGCTTTTAGTAATA 162262 | || ||||| || || ||||| || ||||| || ||||| || |||||||| |||| Sbjct 34359 ATTCCATGGTCACCGCTAACCGCTTTTGGTCCCAAATCTTTGGGGTTGCTTTTTCCAATA 34418 Query 162263 AGCGTTGGTTGCATTTCTTTATGCTCTTCGTTCCCGTCATGGGTCTCTGGACAAGTTCTA 162322 | |||||||| |||||||||||| | || || || || | ||| | |||| ||| || Sbjct 34419 AACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAACCGGTTTATGGATGAGTGCTC 34478 Query 162323 TCGGTATTATTGGACTCGCTCTTAATCTTCGTGCTTACGACTTTGTATCTCAGGAGATTC 162382 | || | | || || || || || || ||||| || ||||| || |||||||| || | Sbjct 34479 TTGGAGTAGTCGGTCTGGCCCTGAACCTACGTGCCTATGACTTCGTTTCTCAGGAAATCC 34538 Query 162383 GTGCAGCGGAGGATCCTGAATTTGAAACCTTCTACACCAAGAATATCCTCTTGAATGAAG 162442 | |||||||| |||||||||||||| || ||||||||||| ||||| ||||| || |||| Sbjct 34539 GCGCAGCGGAAGATCCTGAATTTGAGACTTTCTACACCAAAAATATTCTCTTAAACGAAG 34598 Query 162443 GTCTTCGTGCATGGTTGGCACCAGTTGATCAACCGCATGAGAACTTTGTATTCCCTGAGG 162502 || ||||||| ||| |||| | ||||| || ||||| ||| || |||||||||||| Sbjct 34599 GTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGG 34658 Query 162503 AAGTTCTGCCTAGAGGTAACGCACTGTGAATGG 162535 | ||||| || | || ||||| || | ||||| Sbjct 34659 AGGTTCTACCCCGTGGAAACGCTCT-TTAATGG 34690 >seq2811 Length=1036 Score = 504 bits (558), Expect = 8e-138 Identities = 683/944 (72%), Gaps = 6/944 (1%) Strand=Plus/Plus Query 161545 GATCGTTTCGTTTTTGTTGGCTGGTCTGGACTTCTTCTTTTTCCCACTGCTTATCTTGCT 161604 || |||||||||||||| || |||||||| || | || ||||| ||| ||| | ||| Sbjct 95 GACCGTTTCGTTTTTGTAGGTTGGTCTGGCCTATTGCTCTTTCCTTGTGCCTATTTCGCT 154 Query 161605 ATTGGCGGTTGGCTTACTGGCACGACTTTCGCTACGAGCTGGTATACCCATGGACTCGCT 161664 | || |||||| | || || || || || | || ||||||||||||||| | || Sbjct 155 TTAGGGGGTTGGTTCACAGGTACAACCTTTGTAACTTCATGGTATACCCATGGATTAGCA 214 Query 161665 AGTTCCTATCTTGAGGGTGCAAATTTTCTTACAGCGGCAGTTAGCACTCCAGCTGACGCT 161724 ||||||||| | || ||| || || | || || |||||| ||| || ||| || | Sbjct 215 AGTTCCTATTTGGAAGGTTGTAACTTCTTAACCGCCGCAGTTTCCACCCCTGCTAACAGT 274 Query 161725 ATGGGTCATTCTCTTCTTCTT-CTCTGGGGTCCTGAGGCTCAAGGGGATTTCGTCAGGTG 161783 | | || ||| || || || || ||||||||||| || ||||| ||||| | || Sbjct 275 TTAGCACACTCT-TTGTTGTTACTATGGGGTCCTGAAGCACAAGGAGATTTTACTCGTTG 333 Query 161784 GATCCAACTTGGGGGACTCTGGAATTTTGTGGCGCTCCACGGGGCTTTCGCTCTGATTGG 161843 | ||| | || || || |||| |||| | | || ||||| ||||||| || || || Sbjct 334 GTGTCAATTGGGCGGTCTGTGGACCTTTGCG-CTCTGCACGGCGCTTTCGGACTAATAGG 392 Query 161844 ATTCATGCTTCGTCAGTTTGAACTTGCTCG-TCTTATCGGTATCCGTCCTTACAATGCTA 161902 |||||| | ||||| |||||||||||||| ||| || | | || ||||| ||||| | Sbjct 393 TTTCATGTTACGTCAATTTGAACTTGCTCGATCTGTTCAAT-TACGACCTTATAATGCAA 451 Query 161903 TTGCTTTCTCTGGTCCTATTGCTGTTTTTGTCAGCGTCTTTCTCATATATCCTCTGGGAC 161962 |||| ||||| ||||| |||||||||||||| || || || || ||||| || || | Sbjct 452 TTGCATTCTCCGGTCCAATTGCTGTTTTTGTTTCTGTATTCCTGATTTATCCGCTAGGTC 511 Query 161963 AGTCGTCCTGGTTCTTCGCGCCATCGTTTGGGGTTGCC-GCTATTTTCAGGTTCTTACTT 162021 |||| |||||||| ||||| ||||| || || ||||| || | ||| | || Sbjct 512 AGTCTGGTTGGTTCTTTGCGCCCAGTTTTGGTGTAGCTAGCTATATTTCGATTCATCCTC 571 Query 162022 TTCCTACAAGGTTTCCACAATTGGACGCTTAATCCGTTCCACATGATGGGTGTCGCAGGT 162081 || | ||||| || || |||||||| | || || || || |||||||| || || || Sbjct 572 TTTTTCCAAGGGTTTCATAATTGGACATTGAACCCATTTCATATGATGGGAGTTGCTGGG 631 Query 162082 ATCTTGGGTGGTGCTTTGCTCTCTGCTATTCACGGTGTGACTGTTGAAAACACGCTCTAC 162141 | ||||| | |||| || | | |||||||| |||| || || ||||| || | | Sbjct 632 GTGTTGGGCGCTGCTCTGTTATGCGCTATTCATGGTGCTACCGTAGAAAATACTTTATTT 691 Query 162142 CAAGATGGTGAACAAGCAAATACTTTCAAGGCTTTTGACTCTACGCAAGAGGAGGAGACT 162201 |||||||||| |||||||| ||| |||||| || | || |||| || || ||| Sbjct 692 GAAGATGGTGATGGTGCAAATACATTCCGTGCTTTTAACCCAACTCAAGCTGAAGAAACT 751 Query 162202 TACTCGATGGTTACTGCGAACCGTTTCTGGTCACAGATCTTCGGTATTGCTTTTAGTAAT 162261 || || ||||| || || ||||| || ||||| || ||||| || |||||||| ||| Sbjct 752 TATTCCATGGTCACCGCTAACCGCTTTTGGTCCCAAATCTTTGGGGTTGCTTTTTCCAAT 811 Query 162262 AAGCGTTGGTTGCATTTCTTTATGCTCTTCGTTCCCGTCATGGGTCTCTGGACAAGTTCT 162321 || |||||||| |||||||||||| | || || || || | ||| | |||| ||| || Sbjct 812 AAACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAACCGGTTTATGGATGAGTGCT 871 Query 162322 ATCGGTATTATTGGACTCGCTCTTAATCTTCGTGCTTACGACTTTGTATCTCAGGAGATT 162381 | || | | || || || || || || ||||| || ||||| || |||||||| || Sbjct 872 CTTGGAGTAGTCGGTCTGGCCCTGAACCTACGTGCCTATGACTTCGTTTCTCAGGAAATC 931 Query 162382 CGTGCAGCGGAGGATCCTGAATTTGAAACCTTCTACACCAAGAATATCCTCTTGAATGAA 162441 || |||||||| |||||||||||||| || ||||||||||| ||||| ||||| || ||| Sbjct 932 CGCGCAGCGGAAGATCCTGAATTTGAGACTTTCTACACCAAAAATATTCTCTTAAACGAA 991 Query 162442 GGTCTTCGTGCATGGTTGGCACCAGTTGATCAACCGCATGAGAA 162485 ||| ||||||| ||| |||| | ||||| || ||||| || Sbjct 992 GGTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAA 1035 >seq2823 Length=1025 Score = 396 bits (438), Expect = 3e-105 Identities = 427/563 (76%), Gaps = 2/563 (0%) Strand=Plus/Plus Query 160234 CTACCCCTTCGGTCAGGGTTCTTTCTCCGATGCTATGCCTCTTGGTATCTCTGGTACTTT 160293 |||||| | ||||| || || || || | ||||||||| || |||||||||||||| Sbjct 1 CTACCCAATTGGTCAAGGAAGCTTTTCTGACGGTATGCCTCTAGGAATCTCTGGTACTTT 60 Query 160294 TAACTATATGCTTGTATTCCAAGCAGAACACAATATCCTTATGCATCCGTTCC-ACATGC 160352 |||| ||| ||||||||||||| || ||||| ||||||||||| || || | |||||| Sbjct 61 CAACTTCATGATTGTATTCCAAGCTGAGCACAACATCCTTATGCACCCATTTCTACATGC 120 Query 160353 TCGGTGTTGCTGGGGTATTCGGTGGATCTCTGTTCTCTGCTATGCATGGATCTCTGGTTA 160412 | ||||| ||||| ||||| || || || || ||| |||||||||||| ||| |||| | Sbjct 121 TAGGTGTGGCTGGTGTATTTGGCGGTTCCCTATTCAGTGCTATGCATGGTTCTTTGGTAA 180 Query 160413 CTTCTAGTCTCGTCAGAGAGACGACAGAAACTGAGTCCCAGAACTATGGTTACAAGTTCG 160472 | |||||| | |||| || || ||||||| ||| || || | ||||||| |||| Sbjct 181 CCTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGATTCG 240 Query 160473 GTCAAGAGGAAGAGACTTACAACATCGTCGCAGCACATGGCTACTTCGGTCGTTTGATCT 160532 ||||||||||||| || || || ||||| || || ||||| || || || || ||||||| Sbjct 241 GTCAAGAGGAAGAAACCTATAATATCGTAGCCGCTCATGGTTATTTTGGCCGATTGATCT 300 Query 160533 TCCAATATGCATCCTTTAACAACTCACGCTCTCTGCACTTCTTCCTCGCTGCTTGGCCTG 160592 |||||||||| || ||||| || || ||| | ||||||||| | ||||||||||||| Sbjct 301 TCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACACTTCTTCTTAGCTGCTTGGCCTG 360 Query 160593 TTGTTGGAATCTGGTTCACTGCCCTTGGTGTTTCTACCATGGCATTCAATCTCAATGGTT 160652 | || || ||||||||||| || | ||| | || ||||| ||||| | ||||||| Sbjct 361 TAGTAGGTATCTGGTTCACCGCTTTAGGTATCAGCACTATGGCTTTCAACTTAAATGGTT 420 Query 160653 TCAACTTCAACCAGTCCATCTTGGACAACCAAGGACAAGTTCTGAACACTTGGGCAGACG 160712 | || ||||| || || | | || | ||||| | || | || |||||||| || Sbjct 421 TTAATTTCAATCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATACTTGGGCTGATA 480 Query 160713 TGCTTAACCGCG-CTGGTCTGGGCATGGAAGTCATGCACGAGCGTAACGCTCACAACTTC 160771 | | ||||||| || ||| || |||||||| ||||| || ||||| ||||| || ||| Sbjct 481 TTATCAACCGCGACTAATCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAATTTC 540 Query 160772 CCTCTCGACCTTGCTGCTGCTGA 160794 ||||| ||||| ||||||| ||| Sbjct 541 CCTCTAGACCTAGCTGCTGTTGA 563 >seq838 Length=1002 Score = 360 bits (398), Expect = 2e-94 Identities = 441/598 (74%), Gaps = 3/598 (1%) Strand=Plus/Minus Query 159824 ACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTCCTGATGATCCCAACTCTGTTGGCA 159883 ||| | ||||| || || | || ||||| || || |||||||||| ||| | ||| | Sbjct 597 ACCGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACTTTATTGACC 538 Query 159884 GCAACTATCTGC-TTCATCGTCGCCTTCATCGCTGCTCCCCCTGTGGACATCGATGGCAT 159942 |||||| |||| || || | || ||||| ||||| || || || || || ||||| || Sbjct 537 GCAACT-TCTGTATTTATTATTGCTTTCATTGCTGCACCTCCGGTAGATATTGATGGTAT 479 Query 159943 CCGTG-AACCCGTCGCTGGTTCACTCATGTACGGTAACAACATCATCTCTGGTGCAGTTG 160001 |||| |||| || |||| || | | ||||| ||||| || || || ||||| || Sbjct 478 TCGTGTAACCTGTTTCTGGATCTTTACTTTACGGAAACAATATTATTTCCGGTGCCATTA 419 Query 160002 TTCCCTCTTCCAACGCAATTGGTCTTCACTTCTATCCCATTTGGGAAGCCGCATCGCTCG 160061 | || |||| || || ||| | ||||| || || || |||||||| || || | | Sbjct 418 TCCCTACTTCTGCAGCTATAGGTTTGCACTTTTACCCAATATGGGAAGCGGCTTCTGTTG 359 Query 160062 ACGAGTGGCTCTATAACGGTGGTCCTTTCCAACTCGTAGTCTTCCACTTCCTGATCGGCA 160121 | || ||| | || |||||||| |||| | || | || | |||||| | | || Sbjct 358 ATGAATGGTTATACAACGGTGGCCCTTATGAGCTAATTGTTCTACACTTCTTACTTGGTG 299 Query 160122 TCTATGCCTATATGGGTCGTGAGTGGGAACTCTCTTACCGTCTCGGTATGCGTCCCTGGA 160181 | | |||||||||||||||||||||||| || |||||| |||||||| || |||| Sbjct 298 TAGCTTGCTATATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGCCCTTGGA 239 Query 160182 TCTGTGTTGCATACTCTGCTCCAGTCGCTGCTGCTTCTGCTGTATTCCTCGTCTACCCCT 160241 | ||||||||| || ||||| || || |||||| ||||||| ||| | ||||||| Sbjct 238 TTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATCTACCCAA 179 Query 160242 TCGGTCAGGGTTCTTTCTCCGATGCTATGCCTCTTGGTATCTCTGGTACTTTTAACTATA 160301 | ||||| || || || || | ||||||||| || |||||||||||||| |||| | Sbjct 178 TTGGTCAAGGAAGCTTTTCTGACGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTCA 119 Query 160302 TGCTTGTATTCCAAGCAGAACACAATATCCTTATGCATCCGTTCCACATGCTCGGTGTTG 160361 || ||||||||||||| || ||||| ||||||||||| || || |||||||| ||||| | Sbjct 118 TGATTGTATTCCAAGCTGAGCACAACATCCTTATGCACCCATTTCACATGCTAGGTGTGG 59 Query 160362 CTGGGGTATTCGGTGGATCTCTGTTCTCTGCTATGCATGGATCTCTGGTTACTTCTAG 160419 |||| ||||| || || || || ||| |||||||||||| ||| |||| || ||||| Sbjct 58 CTGGTGTATTTGGCGGTTCCCTATTCAGTGCTATGCATGGTTCTTTGGTAACCTCTAG 1 >seq929 Length=1222 Score = 329 bits (364), Expect = 4e-85 Identities = 414/566 (73%), Gaps = 3/566 (1%) Strand=Plus/Plus Query 159824 ACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTCCTGATGATCCCAACTCTGTTGGCA 159883 ||| | ||||| || || | || ||||| || || |||||||||| ||| | ||| | Sbjct 658 ACCGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACTTTATTGACC 717 Query 159884 GCAACTATCTGC--TTCATCGTCGCCTTCATCGCTGCTCCCCCTGTGGACATCGATGGCA 159941 |||||| |||| || | | || ||||| ||||| || || || || || ||||| | Sbjct 718 GCAACT-TCTGTATTTATTATTAGCTTTCATTGCTGCACCTCCGGTAGATATTGATGGTA 776 Query 159942 TCCGTGAACCCGTCGCTGGTTCACTCATGTACGGTAACAACATCATCTCTGGTGCAGTTG 160001 | |||||||| || |||| || | | ||||| ||||| || || || ||||| || Sbjct 777 TTCGTGAACCTGTTTCTGGATCTTTACTTTACGGAAACAATATTATTTCCGGTGCCATTA 836 Query 160002 TTCCCTCTTCCAACGCAATTGGTCTTCACTTCTATCCCATTTGGGAAGCCGCATCGCTCG 160061 | || |||| || || ||| | ||||| || || || |||||||| || || | | Sbjct 837 TCCCTACTTCTGCAGCTATAGGTTTGCACTTTTACCCAATATGGGAAGCGGCTTCTGTTG 896 Query 160062 ACGAGTGGCTCTATAACGGTGGTCCTTTCCAACTCGTAGTCTTCCACTTCCTGATCGGCA 160121 | || ||| | || |||||||| |||| | || | || | |||||| | | || Sbjct 897 ATGAATGGTTATACAACGGTGGCCCTTATGAGCTAATTGTTCTACACTTCTTACTTGGTG 956 Query 160122 TCTATGCCTATATGGGTCGTGAGTGGGAACTCTCTTACCGTCTCGGTATGCGTCCCTGGA 160181 | | |||||||||||||||||||||||| || |||||| |||||||| || |||| Sbjct 957 TAGCTTGCTATATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGCCCTTGGA 1016 Query 160182 TCTGTGTTGCATACTCTGCTCCAGTCGCTGCTGCTTCTGCTGTATTCCTCGTCTACCCCT 160241 | ||||||||| || ||||| || || |||||| ||||||| ||| | ||||||| Sbjct 1017 TTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATCTACCCAA 1076 Query 160242 TCGGTCAGGGTTCTTTCTCCGATGCTATGCCTCTTGGTATCTCTGGTACTTTTAACTATA 160301 | ||||| || || || || | ||||||||| || |||||||||||||| |||| | Sbjct 1077 TTGGTCAAGGAAGCTTTTCTGACGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTCA 1136 Query 160302 TGCTTGTATTCCAAGCAGAACACAATATCCTTATGCATCCGTTCCACATGCTCGGTGTTG 160361 || ||||||||||||| || ||||| ||||||||||| || || |||||||| ||||| | Sbjct 1137 TGATTGTATTCCAAGCTGAGCACAACATCCTTATGCACCCATTTCACATGCTAGGTGTGG 1196 Query 160362 CTGGGGTATTCGGTGGATCTCTGTTC 160387 |||| ||||| || || || || ||| Sbjct 1197 CTGGTGTATTTGGCGGTTCCCTATTC 1222 >seq990 Length=1011 Score = 251 bits (278), Expect = 8e-62 Identities = 285/378 (75%), Gaps = 3/378 (1%) Strand=Plus/Minus Query 162160 AATACTTTCAAGGCTTTTGACTCTACGCAAGAGGAGGAGACTTACTCGATGGTTACTGCG 162219 ||||| ||| |||||| || | || |||| || || ||||| || ||||| || || Sbjct 982 AATACATTCCGTGCTTTTAACCCAACTCAAGCTGAAGAAACTTATTCCATGGTCACCGCT 923 Query 162220 AACCG-TTTCTGGTCACAGATCTTCGGTATTGCTTTTAGTAATAAGCGTT-GGTTGCATT 162277 ||||| ||| ||||| || ||||| || |||||||| ||||| |||| |||| |||| Sbjct 922 AACCGCTTTTTGGTCCCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTTGGTTACATT 863 Query 162278 TCTTTATGCTCTTCGTTCCCGTCATGGGTCTCTGGACAAGTTCTATCGGTATTATTGGAC 162337 |||||||| | || || || || | ||| | |||| ||| || | || | | || | Sbjct 862 TCTTTATGTTATTTGTACCAGTAACCGGTTTATGGATGAGTGCTCTTGGAGTAGTCGGTC 803 Query 162338 TCGCTCTTAATCTTCGTGCTTACGACTTTGTATCTCAGGAGATTCGTGCAGCGGAGGATC 162397 | || || || || ||||| || ||||| || |||||||| || || |||||||| |||| Sbjct 802 TGGCCCTGAACCTACGTGCCTATGACTTCGTTTCTCAGGAAATCCGCGCAGCGGAAGATC 743 Query 162398 CTGAATTTGAAACCTTCTACACCAAGAATATCCTCTTGAATGAAGGTCTTCGTGCATGGT 162457 |||||||||| || ||||||||||| ||||| ||||| || |||||| ||||||| ||| Sbjct 742 CTGAATTTGAGACTTTCTACACCAAAAATATTCTCTTAAACGAAGGTATTCGTGCTTGGA 683 Query 162458 TGGCACCAGTTGATCAACCGCATGAGAACTTTGTATTCCCTGAGGAAGTTCTGCCTAGAG 162517 |||| | ||||| || ||||| ||| || ||||||||||||| ||||| || | | Sbjct 682 TGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCCCGTG 623 Query 162518 GTAACGCACTGTGAATGG 162535 | ||||| || | ||||| Sbjct 622 GAAACGCTCT-TTAATGG 606 >seq1012 Length=1043 Score = 174 bits (192), Expect = 2e-38 Identities = 193/256 (75%), Gaps = 1/256 (0%) Strand=Plus/Minus Query 162280 TTTATGCTCTTCGTTCCCGTCATGGGTCTCTGGACAAGTTCTATCGGTATTATTGGACTC 162339 |||||| | || || || || | ||| | |||| ||| || | || | | || || Sbjct 1043 TTTATGTTATTTGTACCAGTAACCGGTTTATGGATGAGTGCTCTTGGAGTAGTCGGTCTG 984 Query 162340 GCTCTTAATCTTCGTGCTTACGACTTTGTATCTCAGGAGATTCGTGCAGCGGAGGATCCT 162399 || || || || ||||| || ||||| || |||||||| || || |||||||| |||||| Sbjct 983 GCCCTGAACCTACGTGCCTATGACTTCGTTTCTCAGGAAATCCGCGCAGCGGAAGATCCT 924 Query 162400 GAATTTGAAACCTTCTACACCAAGAATATCCTCTTGAATGAAGGTCTTCGTGCATGGTTG 162459 |||||||| || ||||||||||| ||||| ||||| || |||||| ||||||| ||| || Sbjct 923 GAATTTGAGACTTTCTACACCAAAAATATTCTCTTAAACGAAGGTATTCGTGCTTGGATG 864 Query 162460 GCACCAGTTGATCAACCGCATGAGAACTTTGTATTCCCTGAGGAAGTTCTGCCTAGAGGT 162519 || | ||||| || ||||| ||| || ||||||||||||| ||||| || | || Sbjct 863 GCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCCCGTGGA 804 Query 162520 AACGCACTGTGAATGG 162535 ||||| || | ||||| Sbjct 803 AACGCTCT-TTAATGG 789 >seq5 Length=29328693 Score = 96.9 bits (106), Expect = 4e-15 Identities = 137/190 (72%), Gaps = 2/190 (1%) Strand=Plus/Minus Query 160975 CTTGACGCTGCTGATGAAGCAGGTGTTGACGGACCCTACTCCTGTCGTGCTGGTGCTTGC 161034 || ||||| || || || |||||| | ||| || ||||||||||| || ||| | ||| Sbjct 16018195 CTCGACGCCGCCGAGGAGGCAGGTCTCGACCTCCCTTACTCCTGTCGCGCCGGTTCCTGC 16018136 Query 161035 TCTACTTGTGCTGGTAAGATTGAGAGTGGTACTGTAGATCAATCTGATCA-ATCTTTCCT 161093 ||| | || || || ||| ||| ||| || || || || ||||| || | |||| || Sbjct 16018135 TCTTCCTGCGCCGGCAAGGTTGTTGATGGCACCGTCGACCAGTCTGACCAGAGCTTT-CT 16018077 Query 161094 GGATGATGATCAACTTGAATCAGGATTTGTCCTGACCTGCGTTGCTTATCCCACTTCTGA 161153 |||||||| || |||| || |||||||| || || || || ||||| | ||||| Sbjct 16018076 TGATGATGACCAGATTGATGGTGGCTTTGTCCTCACTTGTGTCGCCTATCCTTCCTCTGA 16018017 Query 161154 TGTAACTATT 161163 ||| ||| || Sbjct 16018016 TGTTACTCTT 16018007 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 551354992574400