Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fragaria_20vesca_20subsp._20vesca_20[refseq_20GCF_5F000184155.1_2020 11-02-24] 3,048 sequences; 214,373,013 total letters Query= NC_031906.1 Length=198190 Score E Sequences producing significant alignments: (Bits) Value seq3048 603 1e-167 seq2811 479 4e-130 seq2823 398 1e-105 seq838 329 4e-85 seq929 311 1e-79 seq990 206 3e-48 seq2704 138 1e-27 seq672 104 3e-17 >seq3048 Length=155691 Score = 603 bits (668), Expect = 1e-167 Identities = 717/964 (74%), Gaps = 10/964 (1%) Strand=Plus/Minus Query 188878 AACCGTCTGTATGTCGGTTGGTTCGGTGTCCTGATGATCCCTACGCTTCTCGCTGCAACC 188937 |||||||| || | || ||||| ||||| ||||||||||||| | | | ||||| Sbjct 1390 AACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACTTTATTGACCGCAACT 1331 Query 188938 ATCTGC-TTCATCGTCGCCTTTGTCGCTGCACCCCCTGTAGACATTGATGGCATCCGCGA 188996 |||| || || | || || | |||||||| || ||||| |||||||| || || || Sbjct 1330 -TCTGTATTTATTATTGCTTTCATTGCTGCACCTCCGGTAGATATTGATGGTATTCGTGA 1272 Query 188997 ACCCGTCGCTGGTTCACTCATGTATGGAAACAACATCATCTCTGGTGCTGTTGTCCCTTC 189056 ||| || |||| || | | || |||||||| || || || ||||| || ||||| | Sbjct 1271 ACCTGTTTCTGGATCTTTACTTTACGGAAACAATATTATTTCCGGTGCCATTATCCCTAC 1212 Query 189057 ATCCAACGCAATTGGTCTTCACTTCTACCCCATCTGGGAAGCCGCCTCACTCGATGAGTG 189116 || || || ||| | ||||| ||||| || |||||||| || || | ||||| || Sbjct 1211 TTCTGCAGCTATAGGTTTGCACTTTTACCCAATATGGGAAGCGGCTTCTGTTGATGAATG 1152 Query 189117 GCTCTACAACGGTGGTCCTTTCCAACTGGTAGTCTTCCACTTCCTCATCGGCATCTACGC 189176 | | ||||||||||| |||| | || | || | |||||| | | || | || || Sbjct 1151 GTTATACAACGGTGGCCCTTATGAGCTAATTGTTCTACACTTCTTACTTGG--TGTA-GC 1095 Query 189177 ---CTACATGGGTCGTGAGTGGGAACTCTCTTACCGTCTCGGTATGCGTCCTTGGATCTG 189233 ||| |||||||||||||||||||| || |||||| |||||||| |||||||| || Sbjct 1094 TTGCTATATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGCCCTTGGAT-TG 1036 Query 189234 CA-TTGCTTACTCTGCACCTGTTGCAGCAGCATCCGCAGTCTTTCTGGTCTATCCTTTTG 189292 | |||| || || || ||||||||||| || | || || || || |||| || ||| Sbjct 1035 CTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATCTACCCAATTG 976 Query 189293 GTCAAGGTTCTTTCTCTGACGCAATGCCCTTGGGTATCAGTGGAACCTTCAACTACATGC 189352 ||||||| || ||||||| ||||| | || ||| ||| || ||||||| |||| Sbjct 975 GTCAAGGAAGCTTTTCTGACGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTCATGA 916 Query 189353 TTGTCTTCCAAGCAGAGCACAACATCCTGATGCACCCCTTCCACATGCTGGGAGTCGCAG 189412 |||| |||||||| |||||||||||||| |||||||| || |||||||| || || || | Sbjct 915 TTGTATTCCAAGCTGAGCACAACATCCTTATGCACCCATTTCACATGCTAGGTGTGGCTG 856 Query 189413 GTGTCTTCGGTGGTTCACTGTTCTCCGCAATGCATGGTTCACTCGTTACCTCTTCACTGG 189472 |||| || || ||||| || ||| || ||||||||||| | || |||||| || Sbjct 855 GTGTATTTGGCGGTTCCCTATTCAGTGCTATGCATGGTTCTTTGGTAACCTCTAGTTTGA 796 Query 189473 TTCGTGAAACCACTGAAACCGAGTCCCAGAACTATGGTTACAAGTTTGGACAAGAAGAAG 189532 | | |||||||| |||| || || || | ||||||| || || ||||| |||| Sbjct 795 TCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGAAG 736 Query 189533 AAACGTACAACATCGTTGCTGCTCATGGATATTTCGGTCGTCTTATCTTCCAATATGCAT 189592 |||| || || ||||| || |||||||| ||||| || || | |||||||||||||| Sbjct 735 AAACCTATAATATCGTAGCCGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTA 676 Query 189593 CGTTCAACAACTCCCGTTCACTTCACTTCTTCCTCGCTGCCTGGCCAGTCGTGGGTATCT 189652 |||||||| || ||||| | ||||||||| | ||||| ||||| || || ||||||| Sbjct 675 GTTTCAACAATTCTCGTTCTTTACACTTCTTCTTAGCTGCTTGGCCTGTAGTAGGTATCT 616 Query 189653 GGTTTACCGCCCTCGGCGTCAGCACCATGGCATTCAACCTCAATGGGTTCAACTTCAATC 189712 |||| ||||| | || ||||||| ||||| |||||| | ||||| || || ||||||| Sbjct 615 GGTTCACCGCTTTAGGTATCAGCACTATGGCTTTCAACTTAAATGGTTTTAATTTCAATC 556 Query 189713 AATCCATTCTTGATGGTCAAGGTCGTGTTCTGAACACATGGGCAGACGTTCTCAACCGTG 189772 |||| | ||||| ||||||||||||| | || || ||||| || || ||||||| | Sbjct 555 AATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATACTTGGGCTGATATTATCAACCGCG 496 Query 189773 CTGGTCTTGGTATGGAAGTCATGCATGAGCGTAACGCTCACAACTTCCCTCTTGATCTGG 189832 || ||||||||||||||| |||||||| ||||| ||||| || |||||||| || || | Sbjct 495 CTAATCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAATTTCCCTCTAGACCTAG 436 Query 189833 CAGC 189836 | || Sbjct 435 CTGC 432 Score = 506 bits (560), Expect = 3e-138 Identities = 722/1014 (71%), Gaps = 2/1014 (0%) Strand=Plus/Plus Query 189987 TTTGACATCCTTGATGACTGGCTTAAACGAGATCGCTTTGTCTTTGTGGGTTGGTCTGGA 190046 ||||| || | ||||||||| | | || || || || ||||| ||||||||||| Sbjct 33671 TTTGATATTATGGATGACTGGTTACGGAGGGACCGTTTCGTTTTTGTAGGTTGGTCTGGC 33730 Query 190047 TTACTTCTTTTTCCCACTGCTTATCTCGCAATTGGTGGCTGGCTTACTGGCACGACGTTT 190106 || | || ||||| ||| ||| |||| | || || ||| | || || || || ||| Sbjct 33731 CTATTGCTCTTTCCTTGTGCCTATTTCGCTTTAGGGGGTTGGTTCACAGGTACAACCTTT 33790 Query 190107 GCTACAAGCTGGTACACCCACGGACTCGCAAGTAGTTACCTTGAGGGTGCTAATTTTCTT 190166 | || ||||| ||||| ||| | |||||| || | || ||| ||| || | Sbjct 33791 GTAACTTCATGGTATACCCATGGATTAGCAAGTTCCTATTTGGAAGGTTGTAACTTCTTA 33850 Query 190167 ACAGCGGCTGTGTCAACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTTTGGGGT 190226 || || || || || || |||||| | | | | || ||| | | |||| |||||| Sbjct 33851 ACCGCCGCAGTTTCCACCCCTGCTAACAGTTTAGCACACTCTTTGTTGTTACTATGGGGT 33910 Query 190227 CCTGAATCTCAAGGCGATTTCGTCAGGTGGATCCAACTTGGGGGACTCTGGGCTTTTGTG 190286 |||||| | ||||| ||||| | ||| ||| | || || || ||| | ||||| Sbjct 33911 CCTGAAGCACAAGGAGATTTTACTCGTTGGTGTCAATTGGGCGGTCTGTGGACCTTTGTC 33970 Query 190287 GCGCTCCACGGGGCTTTCGCTCTAATTGGATTCATGCTTCGTCAGTTTGAACTGGCACG- 190345 || || ||||| ||||||| ||||| || |||||| | ||||| |||||||| || || Sbjct 33971 GCTCTGCACGGCGCTTTCGGACTAATAGGTTTCATGTTACGTCAATTTGAACTTGCTCGA 34030 Query 190346 TCTCATCGGTATCCGTCCTTACAATGCTATTGCGTTCTCTGGTCCTATCGCTGTTTTTGT 190405 ||| || | | || ||||| ||||| ||||| ||||| ||||| || ||||||||||| Sbjct 34031 TCTGTTCAAT-TACGACCTTATAATGCAATTGCATTCTCCGGTCCAATTGCTGTTTTTGT 34089 Query 190406 TAGCGTCTTTCTCATCTACCCTCTGGGTCAATCGAGTTGGTTCTTCGCGCCATCCTTCGG 190465 | || || || || || || || ||||| || |||||||||| ||||| || || Sbjct 34090 TTCTGTATTCCTGATTTATCCGCTAGGTCAGTCTGGTTGGTTCTTTGCGCCCAGTTTTGG 34149 Query 190466 TGTGGCAGCGATCTTCCGCTTCCTCCTCTTCTTGCAGGGCTTCCATAACTGGACGCTGAA 190525 ||| ||||| || || || ||| ||||||| || || || || ||||| ||||| |||| Sbjct 34150 TGTAGCAGCTATATTTCGATTCATCCTCTTTTTCCAAGGGTTTCATAATTGGACATTGAA 34209 Query 190526 CCCCTTCCACATGATGGGTGTTGCAGGTATCCTGGGAGGAGCACTACTGTCAGCAATCCA 190585 ||| || || |||||||| ||||| || | |||| | || || | | || || || Sbjct 34210 CCCATTTCATATGATGGGAGTTGCTGGGGTGTTGGGCGCTGCTCTGTTATGCGCTATTCA 34269 Query 190586 TGGTGTGACTGTAGAGAATACTTTGTATGAAGATGGTGAACAAGCAAACACGTTTAAAGC 190645 ||||| || ||||| |||||||| | |||||||||||| ||||| || || || Sbjct 34270 TGGTGCTACCGTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGTGC 34329 Query 190646 ATTCGACTCTACACAAGAGGAAGAGACCTATTCGATGGTCACTGCCAACCGTTTCTGGTC 190705 || || | || |||| ||||| || ||||| |||||||| || ||||| || ||||| Sbjct 34330 TTTTAACCCAACTCAAGCTGAAGAAACTTATTCCATGGTCACCGCTAACCGCTTTTGGTC 34389 Query 190706 TCAAATCTTTGGTGTTGCGTTCAGTAATAAGAGGTGGTTGCATTTCTTTATGCTCTTTGT 190765 ||||||||||| ||||| || ||||| | ||||| |||||||||||| | ||||| Sbjct 34390 CCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGT 34449 Query 190766 TCCTGTTATGGGTCTGTGGACTTCTTCCATCGGTATTATTGGTCTTGCTCTCAACCTTCG 190825 || || | ||| | |||| | | | || | | ||||| || || ||||| || Sbjct 34450 ACCAGTAACCGGTTTATGGATGAGTGCTCTTGGAGTAGTCGGTCTGGCCCTGAACCTACG 34509 Query 190826 TGCTTATGACTTTGTATCCCAAGAGATCAGAGCAGCAGAAGATCCAGAGTTCGAGACTTT 190885 ||| |||||||| || || || || ||| | ||||| |||||||| || || |||||||| Sbjct 34510 TGCCTATGACTTCGTTTCTCAGGAAATCCGCGCAGCGGAAGATCCTGAATTTGAGACTTT 34569 Query 190886 TTACACAAAAAATATACTTTTGAATGAAGGTCTTCGTTCATGGTTGGCACCTGTTGATCA 190945 ||||| |||||||| || || || |||||| ||||| | ||| |||| || ||||| Sbjct 34570 CTACACCAAAAATATTCTCTTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAAGATCA 34629 Query 190946 ACCCCATGAGAATTTTGTATTTCCAGAAGAAGTATTGCCAAGAGGCAACGCTCT 190999 || ||||| || || |||| || || || || | || | || |||||||| Sbjct 34630 GCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCCCGTGGAAACGCTCT 34683 >seq2811 Length=1036 Score = 479 bits (530), Expect = 4e-130 Identities = 693/973 (71%), Gaps = 4/973 (0%) Strand=Plus/Plus Query 189987 TTTGACATCCTTGATGACTGGCTTAAACGAGATCGCTTTGTCTTTGTGGGTTGGTCTGGA 190046 ||||| || | ||||||||| | | || || || || ||||| ||||||||||| Sbjct 65 TTTGATATTATGGATGACTGGTTACGGAGGGACCGTTTCGTTTTTGTAGGTTGGTCTGGC 124 Query 190047 TTACTTCTTTTTCCCACTGCTTATCTCGCAATTGGTGGCTGGCTTACTGGCACGACGTTT 190106 || | || ||||| ||| ||| |||| | || || ||| | || || || || ||| Sbjct 125 CTATTGCTCTTTCCTTGTGCCTATTTCGCTTTAGGGGGTTGGTTCACAGGTACAACCTTT 184 Query 190107 GCTACAAGCTGGTACACCCACGGACTCGCAAGTAGTTACCTTGAGGGTGCTAATTTTCTT 190166 | || ||||| ||||| ||| | |||||| || | || ||| ||| || | Sbjct 185 GTAACTTCATGGTATACCCATGGATTAGCAAGTTCCTATTTGGAAGGTTGTAACTTCTTA 244 Query 190167 ACAGCGGCTGTGTCAACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTTTGGGGT 190226 || || || || || || |||||| | | | | || ||| | | |||| |||||| Sbjct 245 ACCGCCGCAGTTTCCACCCCTGCTAACAGTTTAGCACACTCTTTGTTGTTACTATGGGGT 304 Query 190227 CCTGAATCTCAAGGCGATTTCGTCAGGTGGATCCAACTTGGGGGACTCTGGGCTTTTGTG 190286 |||||| | ||||| ||||| | ||| ||| | || || || ||| | |||| | Sbjct 305 CCTGAAGCACAAGGAGATTTTACTCGTTGGTGTCAATTGGGCGGTCTGTGGACCTTTGCG 364 Query 190287 GCGCTCCACGGGGCTTTCGCTCTAATTGGATTCATGCTTCGTCAGTTTGAACTGGCACG- 190345 | || ||||| ||||||| ||||| || |||||| | ||||| |||||||| || || Sbjct 365 -CTCTGCACGGCGCTTTCGGACTAATAGGTTTCATGTTACGTCAATTTGAACTTGCTCGA 423 Query 190346 TCTCATCGGTATCCGTCCTTACAATGCTATTGCGTTCTCTGGTCCTATCGCTGTTTTTGT 190405 ||| || | | || ||||| ||||| ||||| ||||| ||||| || ||||||||||| Sbjct 424 TCTGTTCAAT-TACGACCTTATAATGCAATTGCATTCTCCGGTCCAATTGCTGTTTTTGT 482 Query 190406 TAGCGTCTTTCTCATCTACCCTCTGGGTCAATCGAGTTGGTTCTTCGCGCCATCCTTCGG 190465 | || || || || || || || ||||| || |||||||||| ||||| || || Sbjct 483 TTCTGTATTCCTGATTTATCCGCTAGGTCAGTCTGGTTGGTTCTTTGCGCCCAGTTTTGG 542 Query 190466 TGTGGC-AGCGATCTTCCGCTTCCTCCTCTTCTTGCAGGGCTTCCATAACTGGACGCTGA 190524 ||| || ||| || || || ||| ||||||| || || || || ||||| ||||| ||| Sbjct 543 TGTAGCTAGCTATATTTCGATTCATCCTCTTTTTCCAAGGGTTTCATAATTGGACATTGA 602 Query 190525 ACCCCTTCCACATGATGGGTGTTGCAGGTATCCTGGGAGGAGCACTACTGTCAGCAATCC 190584 |||| || || |||||||| ||||| || | |||| | || || | | || || | Sbjct 603 ACCCATTTCATATGATGGGAGTTGCTGGGGTGTTGGGCGCTGCTCTGTTATGCGCTATTC 662 Query 190585 ATGGTGTGACTGTAGAGAATACTTTGTATGAAGATGGTGAACAAGCAAACACGTTTAAAG 190644 |||||| || ||||| |||||||| | |||||||||||| ||||| || || | Sbjct 663 ATGGTGCTACCGTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGTG 722 Query 190645 CATTCGACTCTACACAAGAGGAAGAGACCTATTCGATGGTCACTGCCAACCGTTTCTGGT 190704 | || || | || |||| ||||| || ||||| |||||||| || ||||| || |||| Sbjct 723 CTTTTAACCCAACTCAAGCTGAAGAAACTTATTCCATGGTCACCGCTAACCGCTTTTGGT 782 Query 190705 CTCAAATCTTTGGTGTTGCGTTCAGTAATAAGAGGTGGTTGCATTTCTTTATGCTCTTTG 190764 | ||||||||||| ||||| || ||||| | ||||| |||||||||||| | |||| Sbjct 783 CCCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTG 842 Query 190765 TTCCTGTTATGGGTCTGTGGACTTCTTCCATCGGTATTATTGGTCTTGCTCTCAACCTTC 190824 | || || | ||| | |||| | | | || | | ||||| || || ||||| | Sbjct 843 TACCAGTAACCGGTTTATGGATGAGTGCTCTTGGAGTAGTCGGTCTGGCCCTGAACCTAC 902 Query 190825 GTGCTTATGACTTTGTATCCCAAGAGATCAGAGCAGCAGAAGATCCAGAGTTCGAGACTT 190884 |||| |||||||| || || || || ||| | ||||| |||||||| || || ||||||| Sbjct 903 GTGCCTATGACTTCGTTTCTCAGGAAATCCGCGCAGCGGAAGATCCTGAATTTGAGACTT 962 Query 190885 TTTACACAAAAAATATACTTTTGAATGAAGGTCTTCGTTCATGGTTGGCACCTGTTGATC 190944 | ||||| |||||||| || || || |||||| ||||| | ||| |||| || |||| Sbjct 963 TCTACACCAAAAATATTCTCTTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAAGATC 1022 Query 190945 AACCCCATGAGAA 190957 | || ||||| || Sbjct 1023 AGCCTCATGAAAA 1035 >seq2823 Length=1025 Score = 398 bits (440), Expect = 1e-105 Identities = 424/557 (76%), Gaps = 2/557 (0%) Strand=Plus/Plus Query 189282 CTATCCTTTTGGTCAAGGTTCTTTCTCTGACGCAATGCCCTTGGGTATCAGTGGAACCTT 189341 ||| || |||||||||| || ||||||| ||||| | || ||| ||| || || Sbjct 1 CTACCCAATTGGTCAAGGAAGCTTTTCTGACGGTATGCCTCTAGGAATCTCTGGTACTTT 60 Query 189342 CAACTACATGCTTGTCTTCCAAGCAGAGCACAACATCCTGATGCACCCCTTCC-ACATGC 189400 ||||| |||| |||| |||||||| |||||||||||||| |||||||| || | |||||| Sbjct 61 CAACTTCATGATTGTATTCCAAGCTGAGCACAACATCCTTATGCACCCATTTCTACATGC 120 Query 189401 TGGGAGTCGCAGGTGTCTTCGGTGGTTCACTGTTCTCCGCAATGCATGGTTCACTCGTTA 189460 | || || || ||||| || || ||||| || ||| || ||||||||||| | || | Sbjct 121 TAGGTGTGGCTGGTGTATTTGGCGGTTCCCTATTCAGTGCTATGCATGGTTCTTTGGTAA 180 Query 189461 CCTCTTCACTGGTTCGTGAAACCACTGAAACCGAGTCCCAGAACTATGGTTACAAGTTTG 189520 ||||| || | | |||||||| |||| || || || | ||||||| || | Sbjct 181 CCTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGATTCG 240 Query 189521 GACAAGAAGAAGAAACGTACAACATCGTTGCTGCTCATGGATATTTCGGTCGTCTTATCT 189580 | ||||| |||||||| || || ||||| || |||||||| ||||| || || | |||| Sbjct 241 GTCAAGAGGAAGAAACCTATAATATCGTAGCCGCTCATGGTTATTTTGGCCGATTGATCT 300 Query 189581 TCCAATATGCATCGTTCAACAACTCCCGTTCACTTCACTTCTTCCTCGCTGCCTGGCCAG 189640 |||||||||| |||||||| || ||||| | ||||||||| | ||||| ||||| | Sbjct 301 TCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACACTTCTTCTTAGCTGCTTGGCCTG 360 Query 189641 TCGTGGGTATCTGGTTTACCGCCCTCGGCGTCAGCACCATGGCATTCAACCTCAATGGGT 189700 | || ||||||||||| ||||| | || ||||||| ||||| |||||| | ||||| | Sbjct 361 TAGTAGGTATCTGGTTCACCGCTTTAGGTATCAGCACTATGGCTTTCAACTTAAATGGTT 420 Query 189701 TCAACTTCAATCAATCCATTCTTGATGGTCAAGGTCGTGTTCTGAACACATGGGCAGACG 189760 | || ||||||||||| | ||||| ||||||||||||| | || || ||||| || Sbjct 421 TTAATTTCAATCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATACTTGGGCTGATA 480 Query 189761 TTCTCAACCGTG-CTGGTCTTGGTATGGAAGTCATGCATGAGCGTAACGCTCACAACTTC 189819 || ||||||| | || ||||||||||||||| |||||||| ||||| ||||| || ||| Sbjct 481 TTATCAACCGCGACTAATCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAATTTC 540 Query 189820 CCTCTTGATCTGGCAGC 189836 ||||| || || || || Sbjct 541 CCTCTAGACCTAGCTGC 557 >seq838 Length=1002 Score = 329 bits (364), Expect = 4e-85 Identities = 435/594 (73%), Gaps = 11/594 (2%) Strand=Plus/Minus Query 188878 AACCGTCTGTATGTCGGTTGGTTCGGTGTCCTGATGATCCCTACGCTTCTCGCTGCAACC 188937 |||||||| || | || ||||| ||||| ||||||||||||| | | | ||||| Sbjct 591 AACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACTTTATTGACCGCAACT 532 Query 188938 ATCTGC-TTCATCGTCGCCTTTGTCGCTGCACCCCCTGTAGACATTGATGGCATCCGCG- 188995 |||| || || | || || | |||||||| || ||||| |||||||| || || | Sbjct 531 -TCTGTATTTATTATTGCTTTCATTGCTGCACCTCCGGTAGATATTGATGGTATTCGTGT 473 Query 188996 AACCCGTCGCTGGTTCACTCATGTATGGAAACAACATCATCTCTGGTGCTGTTGTCCCTT 189055 |||| || |||| || | | || |||||||| || || || ||||| || ||||| Sbjct 472 AACCTGTTTCTGGATCTTTACTTTACGGAAACAATATTATTTCCGGTGCCATTATCCCTA 413 Query 189056 CATCCAACGCAATTGGTCTTCACTTCTACCCCATCTGGGAAGCCGCCTCACTCGATGAGT 189115 | || || || ||| | ||||| ||||| || |||||||| || || | ||||| | Sbjct 412 CTTCTGCAGCTATAGGTTTGCACTTTTACCCAATATGGGAAGCGGCTTCTGTTGATGAAT 353 Query 189116 GGCTCTACAACGGTGGTCCTTTCCAACTGGTAGTCTTCCACTTCCTCATCGGCATCTACG 189175 || | ||||||||||| |||| | || | || | |||||| | | || | || | Sbjct 352 GGTTATACAACGGTGGCCCTTATGAGCTAATTGTTCTACACTTCTTACTTGG--TGTA-G 296 Query 189176 C---CTACATGGGTCGTGAGTGGGAACTCTCTTACCGTCTCGGTATGCGTCCTTGGATCT 189232 | ||| |||||||||||||||||||| || |||||| |||||||| |||||||| | Sbjct 295 CTTGCTATATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGCCCTTGGAT-T 237 Query 189233 GCA-TTGCTTACTCTGCACCTGTTGCAGCAGCATCCGCAGTCTTTCTGGTCTATCCTTTT 189291 || |||| || || || ||||||||||| || | || || || || |||| || || Sbjct 236 GCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATCTACCCAATT 177 Query 189292 GGTCAAGGTTCTTTCTCTGACGCAATGCCCTTGGGTATCAGTGGAACCTTCAACTACATG 189351 |||||||| || ||||||| ||||| | || ||| ||| || ||||||| |||| Sbjct 176 GGTCAAGGAAGCTTTTCTGACGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTCATG 117 Query 189352 CTTGTCTTCCAAGCAGAGCACAACATCCTGATGCACCCCTTCCACATGCTGGGAGTCGCA 189411 |||| |||||||| |||||||||||||| |||||||| || |||||||| || || || Sbjct 116 ATTGTATTCCAAGCTGAGCACAACATCCTTATGCACCCATTTCACATGCTAGGTGTGGCT 57 Query 189412 GGTGTCTTCGGTGGTTCACTGTTCTCCGCAATGCATGGTTCACTCGTTACCTCT 189465 ||||| || || ||||| || ||| || ||||||||||| | || |||||| Sbjct 56 GGTGTATTTGGCGGTTCCCTATTCAGTGCTATGCATGGTTCTTTGGTAACCTCT 3 >seq929 Length=1222 Score = 311 bits (344), Expect = 1e-79 Identities = 412/564 (73%), Gaps = 11/564 (2%) Strand=Plus/Plus Query 188878 AACCGTCTGTATGTCGGTTGGTTCGGTGTCCTGATGATCCCTACGCTTCTCGCTGCAACC 188937 |||||||| || | || ||||| ||||| ||||||||||||| | | | ||||| Sbjct 664 AACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACTTTATTGACCGCAACT 723 Query 188938 ATCTGC--TTCATCGTCGCCTTTGTCGCTGCACCCCCTGTAGACATTGATGGCATCCGCG 188995 |||| || | | || || | |||||||| || ||||| |||||||| || || | Sbjct 724 -TCTGTATTTATTATTAGCTTTCATTGCTGCACCTCCGGTAGATATTGATGGTATTCGTG 782 Query 188996 AACCCGTCGCTGGTTCACTCATGTATGGAAACAACATCATCTCTGGTGCTGTTGTCCCTT 189055 |||| || |||| || | | || |||||||| || || || ||||| || ||||| Sbjct 783 AACCTGTTTCTGGATCTTTACTTTACGGAAACAATATTATTTCCGGTGCCATTATCCCTA 842 Query 189056 CATCCAACGCAATTGGTCTTCACTTCTACCCCATCTGGGAAGCCGCCTCACTCGATGAGT 189115 | || || || ||| | ||||| ||||| || |||||||| || || | ||||| | Sbjct 843 CTTCTGCAGCTATAGGTTTGCACTTTTACCCAATATGGGAAGCGGCTTCTGTTGATGAAT 902 Query 189116 GGCTCTACAACGGTGGTCCTTTCCAACTGGTAGTCTTCCACTTCCTCATCGGCATCTACG 189175 || | ||||||||||| |||| | || | || | |||||| | | || | || | Sbjct 903 GGTTATACAACGGTGGCCCTTATGAGCTAATTGTTCTACACTTCTTACTTGG--TGTA-G 959 Query 189176 C---CTACATGGGTCGTGAGTGGGAACTCTCTTACCGTCTCGGTATGCGTCCTTGGATCT 189232 | ||| |||||||||||||||||||| || |||||| |||||||| |||||||| | Sbjct 960 CTTGCTATATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGCCCTTGGAT-T 1018 Query 189233 GC-ATTGCTTACTCTGCACCTGTTGCAGCAGCATCCGCAGTCTTTCTGGTCTATCCTTTT 189291 || |||| || || || ||||||||||| || | || || || || |||| || || Sbjct 1019 GCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATCTACCCAATT 1078 Query 189292 GGTCAAGGTTCTTTCTCTGACGCAATGCCCTTGGGTATCAGTGGAACCTTCAACTACATG 189351 |||||||| || ||||||| ||||| | || ||| ||| || ||||||| |||| Sbjct 1079 GGTCAAGGAAGCTTTTCTGACGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTCATG 1138 Query 189352 CTTGTCTTCCAAGCAGAGCACAACATCCTGATGCACCCCTTCCACATGCTGGGAGTCGCA 189411 |||| |||||||| |||||||||||||| |||||||| || |||||||| || || || Sbjct 1139 ATTGTATTCCAAGCTGAGCACAACATCCTTATGCACCCATTTCACATGCTAGGTGTGGCT 1198 Query 189412 GGTGTCTTCGGTGGTTCACTGTTC 189435 ||||| || || ||||| || ||| Sbjct 1199 GGTGTATTTGGCGGTTCCCTATTC 1222 >seq990 Length=1011 Score = 206 bits (228), Expect = 3e-48 Identities = 289/400 (72%), Gaps = 4/400 (1%) Strand=Plus/Minus Query 190603 ATACTTTGTATGAAGAT-GGTGAACAAGCAAACACGTTTAAAGCATTCGACTCTACACAA 190661 ||||||| | ||||||| ||||| |||| || || || || || | || ||| Sbjct 1011 ATACTTTATTTGAAGATTGGTGATGGTGCAAT-ACATTCCGTGCTTTTAACCCAACTCAA 953 Query 190662 GAGGAAGAGACCTATTCGATGGTCACTGCCAACCG-TTTCTGGTCTCAAATCTTTGGTGT 190720 | ||||| || ||||| |||||||| || ||||| ||| ||||| ||||||||||| || Sbjct 952 GCTGAAGAAACTTATTCCATGGTCACCGCTAACCGCTTTTTGGTCCCAAATCTTTGGGGT 893 Query 190721 TGCGTTCAGTAATAAGAGGT-GGTTGCATTTCTTTATGCTCTTTGTTCCTGTTATGGGTC 190779 ||| || ||||| | | |||| |||||||||||| | ||||| || || | ||| Sbjct 892 TGCTTTTTCCAATAAACGTTTGGTTACATTTCTTTATGTTATTTGTACCAGTAACCGGTT 833 Query 190780 TGTGGACTTCTTCCATCGGTATTATTGGTCTTGCTCTCAACCTTCGTGCTTATGACTTTG 190839 | |||| | | | || | | ||||| || || ||||| ||||| |||||||| | Sbjct 832 TATGGATGAGTGCTCTTGGAGTAGTCGGTCTGGCCCTGAACCTACGTGCCTATGACTTCG 773 Query 190840 TATCCCAAGAGATCAGAGCAGCAGAAGATCCAGAGTTCGAGACTTTTTACACAAAAAATA 190899 | || || || ||| | ||||| |||||||| || || |||||||| ||||| ||||||| Sbjct 772 TTTCTCAGGAAATCCGCGCAGCGGAAGATCCTGAATTTGAGACTTTCTACACCAAAAATA 713 Query 190900 TACTTTTGAATGAAGGTCTTCGTTCATGGTTGGCACCTGTTGATCAACCCCATGAGAATT 190959 | || || || |||||| ||||| | ||| |||| || ||||| || ||||| || Sbjct 712 TTCTCTTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAACC 653 Query 190960 TTGTATTTCCAGAAGAAGTATTGCCAAGAGGCAACGCTCT 190999 || |||| || || || || | || | || |||||||| Sbjct 652 TTATATTCCCTGAGGAGGTTCTACCCCGTGGAAACGCTCT 613 >seq2704 Length=1012 Score = 138 bits (152), Expect = 1e-27 Identities = 188/260 (72%), Gaps = 2/260 (1%) Strand=Plus/Plus Query 188878 AACCGTCTGTATGTCGGTTGGTTCGGTGTCCTGATGATCCCTACGCTTCTCGCTGCAACC 188937 |||||||| || | || ||||| ||||| ||||||||||||| | | | ||||| Sbjct 705 AACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACTTTATTGACCGCAACT 764 Query 188938 ATCTGC-TTCATCGTCGCCTTTGTCGCTGCACCCCCTGTAGACATTGATGGCATCCGCGA 188996 |||| || || | || || | |||||||| || ||||| |||||||| || || || Sbjct 765 -TCTGTATTTATTATTGCTTTCATTGCTGCACCTCCGGTAGATATTGATGGTATTCGTGA 823 Query 188997 ACCCGTCGCTGGTTCACTCATGTATGGAAACAACATCATCTCTGGTGCTGTTGTCCCTTC 189056 ||| || |||| || | | || |||||||| || || || ||||| || ||||| | Sbjct 824 ACCTGTTTCTGGATCTTTACTTTACGGAAACAATATTATTTCCGGTGCCATTATCCCTAC 883 Query 189057 ATCCAACGCAATTGGTCTTCACTTCTACCCCATCTGGGAAGCCGCCTCACTCGATGAGTG 189116 || || || ||| | ||||| ||||| || |||||||| || || | ||||| || Sbjct 884 TTCTGCAGCTATAGGTTTGCACTTTTACCCAATATGGGAAGCGGCTTCTGTTGATGAATG 943 Query 189117 GCTCTACAACGGTGGTCCTT 189136 | | ||||||||||| |||| Sbjct 944 GTTATACAACGGTGGCCCTT 963 >seq672 Length=1075 Score = 104 bits (114), Expect = 3e-17 Identities = 90/112 (80%), Gaps = 0/112 (0%) Strand=Plus/Minus Query 189725 ATGGTCAAGGTCGTGTTCTGAACACATGGGCAGACGTTCTCAACCGTGCTGGTCTTGGTA 189784 || ||||||||||||| | || || ||||| || || ||||||| ||| |||||||| Sbjct 1075 ATAGTCAAGGTCGTGTAATTAATACTTGGGCTGATATTATCAACCGCGCTAATCTTGGTA 1016 Query 189785 TGGAAGTCATGCATGAGCGTAACGCTCACAACTTCCCTCTTGATCTGGCAGC 189836 ||||||| |||||||| ||||| ||||| || |||||||| || || || || Sbjct 1015 TGGAAGTTATGCATGAACGTAATGCTCATAATTTCCCTCTAGACCTAGCTGC 964 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 634055841552000