Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fragaria_20x_20ananassa_20[genbank_20GCA_5F000511835.1_202013-12-06] 625,966 sequences; 697,762,269 total letters Query= AAMG01000750.1 Length=102 Score E Sequences producing significant alignments: (Bits) Value seq3688 82.4 3e-14 seq432205 75.2 5e-12 seq611018 71.6 6e-11 >seq3688 Length=5219 Score = 82.4 bits (90), Expect = 3e-14 Identities = 60/70 (86%), Gaps = 0/70 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 |||||||||||||| |||||||| | |||| ||||||| ||||| ||| ||||||||| Sbjct 4141 GGAAAAGAAACTAAAAAGGATTCCATTAGTACCGGCGAGGGAACATGGAGAAGCCCAGCG 4082 Query 61 CCGAATCCCC 70 | |||||||| Sbjct 4081 CTGAATCCCC 4072 >seq432205 Length=394 Score = 75.2 bits (82), Expect = 5e-12 Identities = 52/59 (88%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 |||||||||||| || |||||||||| |||||||||||| |||| |||| |||||||| Sbjct 364 GGAAAAGAAACTTACAAGGATTCCCTTAGTAACGGCGAGCGAACCAGGAACAGCCCAGC 306 >seq611018 Length=2696 Score = 71.6 bits (78), Expect = 6e-11 Identities = 50/57 (88%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCA 57 |||||||||||| || |||||||||| | |||||||||| |||| ||||| |||||| Sbjct 2061 GGAAAAGAAACTTACAAGGATTCCCTTAATAACGGCGAGCGAACCGGGAATAGCCCA 2005 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 229047913440