Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fragaria_20x_20ananassa_20[genbank_20GCA_5F000511835.1_202013-12-06]
625,966 sequences; 697,762,269 total letters
Query= NC_031922.1
Length=174830
Score E
Sequences producing significant alignments: (Bits) Value
seq39735 253 2e-62
seq32757 208 8e-49
>seq39735
Length=4112
Score = 253 bits (280), Expect = 2e-62
Identities = 263/345 (76%), Gaps = 0/345 (0%)
Strand=Plus/Plus
Query 160962 TATTCTGCACCTGTTGCTGCTGCGAGTGCAGTATTCCTCGTCTATCCTTTCGGTCAAGGT 161021
||||| || |||||||| ||||| | ||| | ||| | |||| || | ||||||||
Sbjct 1640 TATTCAGCTCCTGTTGCAGCTGCTACTGCTATTTTCTTGATCTACCCAATTGGTCAAGGA 1699
Query 161022 TCTTTCTCTGATGGTATGCCCCTGGGTATCTCTGGTACCTTCAACTTCATGCTTGTCTTC 161081
|| ||||| |||||||| || || ||||||||||| |||||||||||| |||| |||
Sbjct 1700 AGCTTTTCTGACGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTCATGATTGTATTC 1759
Query 161082 CAGGCAGAACACAACATCCTGATGCACCCCTTCCACATGTTGGGTGTTGCTGGTGTCTTC 161141
|| || || ||||||||||| |||||||| || |||||| | ||||| |||||||| ||
Sbjct 1760 CAAGCTGAGCACAACATCCTTATGCACCCATTTCACATGCTAGGTGTGGCTGGTGTATTT 1819
Query 161142 GGTGGTTCTCTGTTCTCCGCAATGCATGGTTCACTGGTTACTTCTTCCCTGGTTCGTGAA 161201
|| ||||| || ||| || ||||||||||| |||| || ||| || | | |||
Sbjct 1820 GGCGGTTCCCTATTCAGTGCTATGCATGGTTCTTTGGTAACCTCTAGTTTGATCAGGGAA 1879
Query 161202 ACCACTGAGAACGAGTCCCAGAACTATGGTTACAAGTTTGGTCAAGAAGAAGAGACCTAC 161261
||||| || || || || || | ||||||| || |||||||| ||||| |||||
Sbjct 1880 ACCACAGAAAATGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGAAGAAACCTAT 1939
Query 161262 AACATCGTCGCTGCTCATGGTTACTTCGGTCGCCTGATCTTCCAA 161306
|| ||||| || ||||||||||| || || || |||||||||||
Sbjct 1940 AATATCGTAGCCGCTCATGGTTAGTTTGGCCGATTGATCTTCCAA 1984
>seq32757
Length=9777
Score = 208 bits (230), Expect = 8e-49
Identities = 244/327 (75%), Gaps = 2/327 (1%)
Strand=Plus/Plus
Query 160665 TTTATTACTGCGTTCGTTGCTGCTCCCCCCGTGGACATCGACGGTATCCGTGAACCCGTT 160724
||||||| ||| ||| ||||||| || || || || || || ||||| |||||||| |||
Sbjct 3701 TTTATTATTGCTTTCATTGCTGCACCTCCGGTAGATATTGATGGTATTCGTGAACCTGTT 3760
Query 160725 GCTGGTTCACTGATGTATGGAAACAACATCATCTCTGGTGCAGTTGTTCCTTCTTCCAAC 160784
|||| || | | || |||||||| || || || ||||| || | ||| ||||
Sbjct 3761 TCTGGATCTTTACTTTACGGAAACAATATTATTTCCGGTGCCATTATCCCTACTTCTGCA 3820
Query 160785 GCAATTGGTCTTCACTTCTACCCCATTTGGGAAGCTGCATCTCTTGATGAATGGCTCTAC 160844
|| || ||| | ||||| ||||| || |||||||| || ||| ||||||||||| | |||
Sbjct 3821 GCTATAGGTTTGCACTTTTACCCAATATGGGAAGCGGCTTCTGTTGATGAATGGTTATAC 3880
Query 160845 AATGGTGGTCCTTACCAACTGGTCGTATTTCACTTCCTGATCGGCATCTTCTGCTACATG 160904
|| ||||| ||||| | || | || | |||||| | | || | ||||| |||
Sbjct 3881 AACGGTGGCCCTTATGAGCTAATTGTTCTACACTTCTTACTTGGTGTAGCTTGCTATATG 3940
Query 160905 GGTCGCGAGTGGGAACTTTCCTACCGCCTCGGCATGCGCCCCTGGATCTGC-GTTGCATA 160963
||||| |||||||||||| | ||| || || |||||||| ||||| ||| ||||||||
Sbjct 3941 GGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGCCCTTGGAT-TGCTGTTGCATA 3999
Query 160964 TTCTGCACCTGTTGCTGCTGCGAGTGC 160990
||| || |||||||| ||||| | |||
Sbjct 4000 TTCAGCTCCTGTTGCAGCTGCTACTGC 4026
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 554951496114400
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