Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fraxinus_20excelsior_20[genbank_20GCA_5F900149125.1_202017-01-20] 89,515 sequences; 867,455,155 total letters Query= AAMG01000140.1 Length=336 Score E Sequences producing significant alignments: (Bits) Value seq26855 212 1e-52 seq29172 163 6e-38 seq16560 158 2e-36 seq62924 122 2e-25 seq89515 87.8 3e-15 seq89489 78.8 2e-12 seq3677 78.8 2e-12 seq3354 78.8 2e-12 seq403 78.8 2e-12 >seq26855 Length=3797 Score = 212 bits (234), Expect = 1e-52 Identities = 249/332 (75%), Gaps = 10/332 (3%) Strand=Plus/Minus Query 4 CCCGAGCAGGGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGAG 63 ||||| ||||| |||||||||| |||||| ||| |||||||| | ||||||||| Sbjct 1331 CCCGACAAGGGGAGTGAAATAGAACCTGAAACCGGATGCCTACAAACAGTCGGAGCCA-- 1274 Query 64 TGATTCGGTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAG 123 | || ||||||||||| ||||||| |||||| | | ||| |||||| | || |||||| Sbjct 1273 TCATG-GGTGACGGCGTACCTTTTGTATAATGGGTCAGCGACTTAGTC-TGACGAGCGAG 1216 Query 124 GTTAAGGGCTTCAGGCCCGTT-AGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTT 182 ||||| | || || || || || ||||||||| || ||||||||| |||| Sbjct 1215 CTTAAG-----CCGGTAGGTGGAGGCGCAGCGAAAGCGAGTCTGAACAGGGCGTTCAGTT 1161 Query 183 GGTGGCGCTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACG 242 || | ||||| ||||||| |||||||| ||| ||||||| ||||| || ||||| Sbjct 1160 CGTCGGATTAGACCCGAAACCGAGTGATCTAGCCATGAGCAGGCTGAAGGTGCAGTAACA 1101 Query 243 CGTGATGGAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGG 302 | || ||| ||||||| | | |||| || || |||||||| | || |||||| Sbjct 1100 TGCACTGAAGGGCCGAACCCGCATCTGTTGCAATAGATTGGGATGACTTGTGGCTAGGGG 1041 Query 303 TGAAAGGCCAATCAAACTGGGAAATAGCTCGT 334 |||||||||||||||||| |||||||||| || Sbjct 1040 TGAAAGGCCAATCAAACTCGGAAATAGCTGGT 1009 >seq29172 Length=4153 Score = 163 bits (180), Expect = 6e-38 Identities = 252/352 (72%), Gaps = 27/352 (8%) Strand=Plus/Minus Query 1 TAGCCCGAGCAGGGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCC 60 || |||| | ||||| ||||||||| |||||| ||| | |||||||||| || ||||| Sbjct 2099 TACCCCGGG-AGGGGAGTGAAATAGTACCTGAAACCGTGTGCCTACAAGCCGTGAGAGCC 2041 Query 61 GAGTG---ATTCG---------GTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTA 108 || ||||| |||| |||||||||||| | ||||||||| ||||||| Sbjct 2040 TTATGCGCATTCGTGCGTGGGGGTGATTGCGTGCCTTTTGAAGAATGAGCCTGCGAGTTA 1981 Query 109 GTCGTCACCAGCGAGGTTAAGGGCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAA 168 | || |||||||||| | | || | |||||| || ||||||||| | || Sbjct 1980 GCGGTACGTGGCGAGGTTAACC-CGTGTGG---GGTAGCCGTAGCGAAAGCGAGTCCGAA 1925 Query 169 CAGGGCGAC--GAGTTGGTGGCGCTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGT 226 |||||||| |||| | || |||||| |||| || |||||||||||| | ||||| Sbjct 1924 TAGGGCGACCTGAGTCGCGTGCTCTAGACCCGAAGCCGAGTGATCTACCCATGGCCAGGT 1865 Query 227 TGAAGTCGCGG-TAA---CGCGTGATGGAGGACCGAACCGGTAAACGTTGAAAAGTTTTC 282 ||||| ||||| ||| |||||| |||||||||||| |||||||| Sbjct 1864 TGAAG-CGCGGGTAAGACCGCGTG---GAGGACCGAACCCACTTCGGTTGAAAACGGAGG 1809 Query 283 GGATGACTCGCGGGTAGGGGTGAAAGGCCAATCAAACTGGGAAATAGCTCGT 334 |||||| | || |||||||||||||||||||||||| | |||||| || Sbjct 1808 GGATGAGCTGTGGATAGGGGTGAAAGGCCAATCAAACTCCGTGATAGCTGGT 1757 >seq16560 Length=1890 Score = 158 bits (174), Expect = 2e-36 Identities = 196/264 (74%), Gaps = 6/264 (2%) Strand=Plus/Plus Query 72 TGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAGGTTAAGGG 131 |||| |||| ||| |||||||||| | || || ||| | || | ||| || ||||| Sbjct 15 TGACAGCGTACCTCTTGCATAATGGGTCTGTGACTTAAT-GTATCAAGCAAGCTTAAGCC 73 Query 132 CTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGAC-GAGTTGGTGGCGC 190 | ||| ||| || || ||||||||| || || |||||||| ||||| | | Sbjct 74 GAT-AGGTG---TAGGCGCAGCGAAAGCGAGTCTGAATAGGGCGACAGAGTTTGATGTAT 129 Query 191 TAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGATGG 250 ||||| ||||||| | |||||| || || |||| ||||| || ||||| | ||| Sbjct 130 TAGACCCGAAACCCGGCGATCTAGGCATGACCAGGATGAAGGTGCAGTAACATGCACTGG 189 Query 251 AGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGGC 310 ||| |||||||| | |||||||||||||| ||||||| | | | |||||||||||||| Sbjct 190 AGGTCCGAACCGATTAACGTTGAAAAGTTACCGGATGAGTTGTGTTTAGGGGTGAAAGGC 249 Query 311 CAATCAAACTGGGAAATAGCTCGT 334 ||||||| | ||||||||||| || Sbjct 250 CAATCAAGCCGGGAAATAGCTGGT 273 >seq62924 Length=777 Score = 122 bits (134), Expect = 2e-25 Identities = 141/190 (74%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 145 AGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTGGTGGCGCTAGACGCGAAACCT 204 ||||| || |||| |||| | || ||||||| ||| | ||| ||||| ||||||| Sbjct 18 AGCCGTAGAGAAATCGAGTCCGAATAGGGCGATCAGTCGCTGGGTGTAGACCCGAAACCA 77 Query 205 TGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGATGGAGGACCGAACCGGT 264 |||||||| ||| | |||| ||||| || ||||| || |||||| |||||||| Sbjct 78 AGTGATCTATCCATGGCCAGGATGAAGGTGCCGTAACAGGTACTGGAGGTCCGAACCGAC 137 Query 265 AAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGGCCAATCAAACTGGGA 324 | |||| ||| | ||||||| | || |||||||||||||| || |||||| ||| Sbjct 138 TAGTGTTGCAAAACTAGCGGATGAGCTGTGGATAGGGGTGAAAGGCTAAACAAACTTGGA 197 Query 325 AATAGCTCGT 334 ||||||| || Sbjct 198 AATAGCTGGT 207 >seq89515 Length=155578 Score = 87.8 bits (96), Expect = 3e-15 Identities = 209/309 (68%), Gaps = 8/309 (3%) Strand=Plus/Plus Query 12 GGGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGAGTGAT-TCG 70 |||| |||||||||| | |||| ||| || ||||| || |||| ||| | || Sbjct 106755 GGGGAGTGAAATAGAACATGAAACCGTAAGCTCCCAAGCAGTGGGAG--GAGCCAGGTCT 106812 Query 71 GTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAGGTTAAGG 130 |||| |||||||| ||| | |||||||| ||| | | | | || || |||||||| Sbjct 106813 CTGACCGCGTGCCTGTTGAAGAATGAGCCGGCGACTCA-TAGGCAGTGGCTTGGTTAAGG 106871 Query 131 GCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTGGTGGCGC 190 | | ||| ||||| || ||||||||| ||| | ||||| | || || Sbjct 106872 GAACCCA--CCGG-AGCCGTAGCGAAAGCGAGTCTTCATAGGGCAATT-GTCACTGCTTA 106927 Query 191 TAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGATGG 250 | ||| |||| | |||||||| ||| || |||| ||||| ||| | | ||| Sbjct 106928 TGGACCCGAACCTGGGTGATCTATCCATGACCAGGATGAAGCTTGGGTGAAACTAAGTGG 106987 Query 251 AGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGGC 310 ||| |||||||| | |||||| | | ||||||| | | || ||||||||||| || Sbjct 106988 AGGTCCGAACCGACTGATGTTGAAGAATCAGCGGATGAGTTGTGGTTAGGGGTGAAATGC 107047 Query 311 CAATCAAAC 319 || || ||| Sbjct 107048 CACTCGAAC 107056 Score = 87.8 bits (96), Expect = 3e-15 Identities = 209/309 (68%), Gaps = 8/309 (3%) Strand=Plus/Minus Query 12 GGGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGAGTGAT-TCG 70 |||| |||||||||| | |||| ||| || ||||| || |||| ||| | || Sbjct 135121 GGGGAGTGAAATAGAACATGAAACCGTAAGCTCCCAAGCAGTGGGAG--GAGCCAGGTCT 135064 Query 71 GTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAGGTTAAGG 130 |||| |||||||| ||| | |||||||| ||| | | | | || || |||||||| Sbjct 135063 CTGACCGCGTGCCTGTTGAAGAATGAGCCGGCGACTCA-TAGGCAGTGGCTTGGTTAAGG 135005 Query 131 GCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTGGTGGCGC 190 | | ||| ||||| || ||||||||| ||| | ||||| | || || Sbjct 135004 GAACCCA--CCGG-AGCCGTAGCGAAAGCGAGTCTTCATAGGGCAATT-GTCACTGCTTA 134949 Query 191 TAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGATGG 250 | ||| |||| | |||||||| ||| || |||| ||||| ||| | | ||| Sbjct 134948 TGGACCCGAACCTGGGTGATCTATCCATGACCAGGATGAAGCTTGGGTGAAACTAAGTGG 134889 Query 251 AGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGGC 310 ||| |||||||| | |||||| | | ||||||| | | || ||||||||||| || Sbjct 134888 AGGTCCGAACCGACTGATGTTGAAGAATCAGCGGATGAGTTGTGGTTAGGGGTGAAATGC 134829 Query 311 CAATCAAAC 319 || || ||| Sbjct 134828 CACTCGAAC 134820 >seq89489 Length=184534 Score = 78.8 bits (86), Expect = 2e-12 Identities = 104/143 (73%), Gaps = 1/143 (1%) Strand=Plus/Plus Query 193 GACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTC-GCGGTAACGCGTGATGGA 251 ||| ||||||| |||||| ||| ||||||||||||| || |||| | |||| Sbjct 76794 GACCCGAAACCGATCGATCTAGCCATGAGCAGGTTGAAGAGAGCTCTAACAGGCCTTGGA 76853 Query 252 GGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGGCC 311 |||||||||| | || | ||| | |||||||| | || ||||||||||||||| Sbjct 76854 GGACCGAACCCACGTATGTGGCAAAATACGGGGATGACTTGTGGCTAGGGGTGAAAGGCC 76913 Query 312 AATCAAACTGGGAAATAGCTCGT 334 || ||| | ||| |||||| || Sbjct 76914 AACCAAGATCGGATATAGCTGGT 76936 >seq3677 Length=63360 Score = 78.8 bits (86), Expect = 2e-12 Identities = 104/143 (73%), Gaps = 1/143 (1%) Strand=Plus/Minus Query 193 GACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTC-GCGGTAACGCGTGATGGA 251 ||| ||||||| |||||| ||| ||||||||||||| || |||| | |||| Sbjct 18631 GACCCGAAACCGATCGATCTAGCCATGAGCAGGTTGAAGAGAGCTCTAACAGGCCTTGGA 18572 Query 252 GGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGGCC 311 |||||||||| | || | ||| | |||||||| | || ||||||||||||||| Sbjct 18571 GGACCGAACCCACGTATGTGGCAAAATACGGGGATGACTTGTGGCTAGGGGTGAAAGGCC 18512 Query 312 AATCAAACTGGGAAATAGCTCGT 334 || ||| | ||| |||||| || Sbjct 18511 AACCAAGATCGGATATAGCTGGT 18489 >seq3354 Length=110323 Score = 78.8 bits (86), Expect = 2e-12 Identities = 104/143 (73%), Gaps = 1/143 (1%) Strand=Plus/Plus Query 193 GACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTC-GCGGTAACGCGTGATGGA 251 ||| ||||||| |||||| ||| ||||||||||||| || |||| | |||| Sbjct 35883 GACCCGAAACCGATCGATCTAGCCATGAGCAGGTTGAAGAGAGCTCTAACAGGCCTTGGA 35942 Query 252 GGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGGCC 311 |||||||||| | || | ||| | |||||||| | || ||||||||||||||| Sbjct 35943 GGACCGAACCCACGTATGTGGCAAAATACGGGGATGACTTGTGGCTAGGGGTGAAAGGCC 36002 Query 312 AATCAAACTGGGAAATAGCTCGT 334 || ||| | ||| |||||| || Sbjct 36003 AACCAAGATCGGATATAGCTGGT 36025 >seq403 Length=169495 Score = 78.8 bits (86), Expect = 2e-12 Identities = 104/143 (73%), Gaps = 1/143 (1%) Strand=Plus/Plus Query 193 GACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTC-GCGGTAACGCGTGATGGA 251 ||| ||||||| |||||| ||| ||||||||||||| || |||| | |||| Sbjct 19600 GACCCGAAACCGATCGATCTAGCCATGAGCAGGTTGAAGAGAGCTCTAACAGGCCTTGGA 19659 Query 252 GGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGGCC 311 |||||||||| | || | ||| | |||||||| | || ||||||||||||||| Sbjct 19660 GGACCGAACCCACGTATGTGGCAAAATACGGGGATGACTTGTGGCTAGGGGTGAAAGGCC 19719 Query 312 AATCAAACTGGGAAATAGCTCGT 334 || ||| | ||| |||||| || Sbjct 19720 AACCAAGATCGGATATAGCTGGT 19742 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 971929198080