Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fraxinus_20excelsior_20[genbank_20GCA_5F900149125.1_202017-01-20] 89,515 sequences; 867,455,155 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq18261 502 5e-140 seq10520 233 3e-59 seq7968 233 3e-59 seq1811 233 3e-59 seq1593 233 3e-59 seq36371 125 1e-26 seq4060 113 8e-23 seq5193 93.3 8e-17 seq881 87.8 3e-15 seq41062 82.4 1e-13 seq19056 78.8 2e-12 seq3723 75.2 2e-11 >seq18261 Length=6344 Score = 502 bits (556), Expect = 5e-140 Identities = 303/318 (95%), Gaps = 1/318 (0%) Strand=Plus/Plus Query 1 TACTTGGTCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCG 60 |||||| ||||||||||||||||||||||| || || |||||||||||||||||||| | Sbjct 2585 TACTTG-TCCGGCCGGGCCTTTCCTTCTGGAGAACCTCATGCCCTTCACTGGGTGTGTTG 2643 Query 61 GGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAAT 120 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2644 GGGAACCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAAT 2703 Query 121 ACATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCG 180 || |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 2704 ACGTTAGCATGGAATAATAGAATAGGACGTGCGGTCCTATTTTGTTGGTTTCTAGGACCG 2763 Query 181 CCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTC 240 ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| Sbjct 2764 CCGTAATGATTAATAGGGACAGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTC 2823 Query 241 TTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCA 300 ||||||||||||||||||||||||||||||||| || |||||||||||||||||||||| Sbjct 2824 TTGGATTTATTGAAGACTAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA 2883 Query 301 GTGAACGAAAGTTAGGGG 318 |||||||||||||||||| Sbjct 2884 GTGAACGAAAGTTAGGGG 2901 >seq10520 Length=91749 Score = 233 bits (258), Expect = 3e-59 Identities = 203/248 (82%), Gaps = 3/248 (1%) Strand=Plus/Plus Query 72 CTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGCAT 130 || |||||||||| ||||||||||| |||||||| |||| |||| | |||||||||||| Sbjct 88959 CTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGGATACATTAGCAT 89018 Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGAT 190 || |||| | |||||| | |||| ||||| ||||| | ||| || |||||||| Sbjct 89019 GGGATAACATTATAGGATTT-CGGTCCTATTACGTTGGCCTTCGGGATCGGAGTAATGAT 89077 Query 191 TAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTAT 250 ||| ||||| ||||||||| | ||||| || |||||||||||||||||||||||||| Sbjct 89078 TAACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTAT 89137 Query 251 TGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAA 310 ||||| ||| ||||||||||| || |||||||||||||||||||||| |||||||| Sbjct 89138 GAAAGACGAACAACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAACGAAA 89196 Query 311 GTTAGGGG 318 ||| |||| Sbjct 89197 GTTGGGGG 89204 >seq7968 Length=42325 Score = 233 bits (258), Expect = 3e-59 Identities = 203/248 (82%), Gaps = 3/248 (1%) Strand=Plus/Plus Query 72 CTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGCAT 130 || |||||||||| ||||||||||| |||||||| |||| |||| | |||||||||||| Sbjct 34760 CTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGGATACATTAGCAT 34819 Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGAT 190 || |||| | |||||| | |||| ||||| ||||| | ||| || |||||||| Sbjct 34820 GGGATAACATTATAGGATTT-CGGTCCTATTACGTTGGCCTTCGGGATCGGAGTAATGAT 34878 Query 191 TAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTAT 250 ||| ||||| ||||||||| | ||||| || |||||||||||||||||||||||||| Sbjct 34879 TAACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTAT 34938 Query 251 TGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAA 310 ||||| ||| ||||||||||| || |||||||||||||||||||||| |||||||| Sbjct 34939 GAAAGACGAACAACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAACGAAA 34997 Query 311 GTTAGGGG 318 ||| |||| Sbjct 34998 GTTGGGGG 35005 >seq1811 Length=159848 Score = 233 bits (258), Expect = 3e-59 Identities = 203/248 (82%), Gaps = 3/248 (1%) Strand=Plus/Minus Query 72 CTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGCAT 130 || |||||||||| ||||||||||| |||||||| |||| |||| | |||||||||||| Sbjct 6428 CTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGGATACATTAGCAT 6369 Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGAT 190 || |||| | |||||| | |||| ||||| ||||| | ||| || |||||||| Sbjct 6368 GGGATAACATTATAGGATTT-CGGTCCTATTACGTTGGCCTTCGGGATCGGAGTAATGAT 6310 Query 191 TAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTAT 250 ||| ||||| ||||||||| | ||||| || |||||||||||||||||||||||||| Sbjct 6309 TAACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTAT 6250 Query 251 TGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAA 310 ||||| ||| ||||||||||| || |||||||||||||||||||||| |||||||| Sbjct 6249 GAAAGACGAACAACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAACGAAA 6191 Query 311 GTTAGGGG 318 ||| |||| Sbjct 6190 GTTGGGGG 6183 >seq1593 Length=76168 Score = 233 bits (258), Expect = 3e-59 Identities = 203/248 (82%), Gaps = 3/248 (1%) Strand=Plus/Minus Query 72 CTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGCAT 130 || |||||||||| ||||||||||| |||||||| |||| |||| | |||||||||||| Sbjct 40734 CTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGGATACATTAGCAT 40675 Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGAT 190 || |||| | |||||| | |||| ||||| ||||| | ||| || |||||||| Sbjct 40674 GGGATAACATTATAGGATTT-CGGTCCTATTACGTTGGCCTTCGGGATCGGAGTAATGAT 40616 Query 191 TAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTAT 250 ||| ||||| ||||||||| | ||||| || |||||||||||||||||||||||||| Sbjct 40615 TAACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTAT 40556 Query 251 TGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAA 310 ||||| ||| ||||||||||| || |||||||||||||||||||||| |||||||| Sbjct 40555 GAAAGACGAACAACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAACGAAA 40497 Query 311 GTTAGGGG 318 ||| |||| Sbjct 40496 GTTGGGGG 40489 >seq36371 Length=6466 Score = 125 bits (138), Expect = 1e-26 Identities = 91/104 (88%), Gaps = 1/104 (1%) Strand=Plus/Minus Query 215 GTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCG 274 ||||| || |||||||||||||||||||||||||| ||||| ||| ||||||||||| Sbjct 6461 GTATTTCATAGTCAGAGGTGAAATTCTTGGATTTATGAAAGACGAACAACTGCGAAAGCA 6402 Query 275 TTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318 || |||||||||||||||||||||| ||||||||||| |||| Sbjct 6401 TTTGCCAAGGATGTTTTCATTAATCA-AGAACGAAAGTTGGGGG 6359 >seq4060 Length=61437 Score = 113 bits (124), Expect = 8e-23 Identities = 177/246 (72%), Gaps = 7/246 (3%) Strand=Plus/Minus Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGCATGGA 133 ||| |||||| |||||||||| |||||||| | | ||||| ||||||||||||||| Sbjct 46379 TTATTTTGAAGGAATTAGAGTGCTCAAAGCAACCATGTGCTCAGAATACATTAGCATGAG 46320 Query 134 ATAATAGAATAGGACGTGCGGTTCTATTTTGTTG-GTTTCTAGGACCGCCGTAATGATTA 192 |||| | ||| || | | | ||||| | ||| ||| | || | ||||||||| Sbjct 46319 ATAACATTATAAGA--TTCAATCCTATTATATTGACATTCGA-GATCAAAATAATGATTA 46263 Query 193 ATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTG 252 ||||| || ||| | | || | || ||||| ||| || |||||| |||||| Sbjct 46262 ATAGGAATGATCGAAGACATTCATAATTTATAGTCAGCGGTAAAGTTCTTGAATTTATAA 46203 Query 253 AAGACTAACTACTGCGAAAGCGTTCACCAAGGA-TGTTTTCATTAATCAGTGAACGAAAG 311 ||||| || | ||||||||| || |||| | ||||||||||||||| ||| |||| Sbjct 46202 AAGACAAAAAATTGCGAAAGCATTTGCCAATAACTGTTTTCATTAATCA-AGAATGAAAA 46144 Query 312 TTAGGG 317 || ||| Sbjct 46143 TTGGGG 46138 >seq5193 Length=180230 Score = 93.3 bits (102), Expect = 8e-17 Identities = 96/123 (78%), Gaps = 2/123 (2%) Strand=Plus/Plus Query 72 CTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGCAT 130 || |||||||||| ||||||||||| |||||||| |||| |||| | |||||||||||| Sbjct 127079 CTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGGATACATTAGCAT 127138 Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGAT 190 | |||| | |||||| | |||| ||||| ||||| | ||| || |||||||| Sbjct 127139 GAGATAACATTATAGGA-TTTCGGTCCTATTACGTTGGCCTTCGGGATCGGAGTAATGAT 127197 Query 191 TAA 193 ||| Sbjct 127198 TAA 127200 >seq881 Length=193844 Score = 87.8 bits (96), Expect = 3e-15 Identities = 76/93 (82%), Gaps = 1/93 (1%) Strand=Plus/Minus Query 226 TCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGA 285 || ||||||| ||| |||||||||| ||||| ||| ||| |||||| || ||| || Sbjct 149134 TCGGAGGTGAGATTTTTGGATTTATGAAAGACGAACAACTATGAAAGCATTTGTCAATGA 149075 Query 286 TGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318 | ||||||||||||| |||||||||||||||| Sbjct 149074 TATTTTCATTAATCA-AGAACGAAAGTTAGGGG 149043 >seq41062 Length=6695 Score = 82.4 bits (90), Expect = 1e-13 Identities = 62/72 (86%), Gaps = 1/72 (1%) Strand=Plus/Plus Query 247 TTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAAC 306 |||| ||||| ||| ||||||||||| || |||||||||||||||||||||| |||| Sbjct 1 TTATGAAAGACGAACAACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAAC 59 Query 307 GAAAGTTAGGGG 318 ||||||| |||| Sbjct 60 GAAAGTTGGGGG 71 >seq19056 Length=551 Score = 78.8 bits (86), Expect = 2e-12 Identities = 141/200 (71%), Gaps = 11/200 (6%) Strand=Plus/Plus Query 127 GCATGGAATAATAGAATAGGACGTGCGGTTCTATTTT--GTT----GGTTTCTAGGA--C 178 |||| |||||| ||| | ||||| |||||| | | ||| ||||| | ||| | Sbjct 317 GCATAGAATAACTGAAGATGACGT-CGGTTCCAGATAAGGTTAAGTGGTTT-TCGGAACC 374 Query 179 CGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAAT 238 || |||||||||||| ||||| | |||||| | ||||| || ||||||||||| Sbjct 375 CGACGTAATGATTAACAGGGACGGGCGGGGGCATTCGTATTGCGACGTTAGAGGTGAAAT 434 Query 239 TCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAAT 298 |||| ||| ||||| ||| ||||||||||| ||||| | || | || || Sbjct 435 TCTTAGATCGTCGCAAGACGAACCGAAGCGAAAGCGTTTGCCAAGTACGTCCCCGTTGAT 494 Query 299 CAGTGAACGAAAGTTAGGGG 318 || ||||||||||||| || Sbjct 495 CA-AGAACGAAAGTTAGAGG 513 >seq3723 Length=71406 Score = 75.2 bits (82), Expect = 2e-11 Identities = 67/83 (81%), Gaps = 1/83 (1%) Strand=Plus/Minus Query 66 CCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACAT 124 |||| || |||||||||| |||||||| || |||||||| || | ||||| | |||||| Sbjct 27715 CCAGTTCTGTTACTTTGAAGAAATTAGAATGCTCAAAGCAAGCATATGCTCTGGATACAT 27656 Query 125 TAGCATGGAATAATAGAATAGGA 147 ||||||| |||| | |||||| Sbjct 27655 TAGCATGTGATAACATTATAGGA 27633 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 914380758720