Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fraxinus_20excelsior_20[genbank_20GCA_5F900149125.1_202017-01-20]
89,515 sequences; 867,455,155 total letters
Query= AAMG01000567.1
Length=197
Score E
Sequences producing significant alignments: (Bits) Value
seq28376 96.9 4e-18
seq89515 93.3 4e-17
seq89489 86.0 7e-15
seq3677 86.0 7e-15
seq3354 86.0 7e-15
seq1235 86.0 7e-15
seq403 86.0 7e-15
>seq28376
Length=614
Score = 96.9 bits (106), Expect = 4e-18
Identities = 124/167 (74%), Gaps = 7/167 (4%)
Strand=Plus/Minus
Query 25 AAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGT-TAAG 83
|||| |||||| |||| ||| || ||||| |||| || ||| || | | | ||||
Sbjct 295 AAACCGACACAGGTAGGTAGGTAGAGTATACCAAGGGGCGCGAGATAA-CTCTCTCTAAG 237
Query 84 GAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGGGAGG 143
||||| |||||| || ||| |||||||||||| || ||| || | || | ||||
Sbjct 236 GAACTCGGCAAAATGGCCCCGTAACTTCGGGAGAAGGGGCGCCCTC----AATTAAGAGG 181
Query 144 GC-GCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189
|| |||| || ||| |||||| |||||||| |||||||||||| ||
Sbjct 180 GCCGCAGTGACCAGGCCCAGGCGACTGTTTACCAAAAACACAGGTCT 134
>seq89515
Length=155578
Score = 93.3 bits (102), Expect = 4e-17
Identities = 87/110 (79%), Gaps = 2/110 (2%)
Strand=Plus/Plus
Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGG 139
||||||||| |||||| | ||| |||||||||||| || |||| ||| | || ||| |
Sbjct 107951 TAAGGAACTCGGCAAAATAGCCCCGTAACTTCGGGAGAAGGGGTGCCTCCTCACAAA--G 108008
Query 140 GAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189
| || ||||| || ||| || ||| |||||||| |||||||||||| ||
Sbjct 108009 GGGGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCT 108058
Score = 93.3 bits (102), Expect = 4e-17
Identities = 87/110 (79%), Gaps = 2/110 (2%)
Strand=Plus/Minus
Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGG 139
||||||||| |||||| | ||| |||||||||||| || |||| ||| | || ||| |
Sbjct 133925 TAAGGAACTCGGCAAAATAGCCCCGTAACTTCGGGAGAAGGGGTGCCTCCTCACAAA--G 133868
Query 140 GAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189
| || ||||| || ||| || ||| |||||||| |||||||||||| ||
Sbjct 133867 GGGGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCT 133818
>seq89489
Length=184534
Score = 86.0 bits (94), Expect = 7e-15
Identities = 79/100 (79%), Gaps = 0/100 (0%)
Strand=Plus/Plus
Query 24 CAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAG 83
||||| |||||| || | || || ||||||| |||||||||| ||| || | |||
Sbjct 77924 CAAACCGACACAGGTGAACAAGTAGAGTATACTAGGGCGCTTGAGAGAACCATGTCGAAG 77983
Query 84 GAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGT 123
||||| |||||| |||||| |||||||||||| || ||||
Sbjct 77984 GAACTCGGCAAAATGACCCCGTAACTTCGGGAGAAGGGGT 78023
>seq3677
Length=63360
Score = 86.0 bits (94), Expect = 7e-15
Identities = 79/100 (79%), Gaps = 0/100 (0%)
Strand=Plus/Minus
Query 24 CAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAG 83
||||| |||||| || | || || ||||||| |||||||||| ||| || | |||
Sbjct 17501 CAAACCGACACAGGTGAACAAGTAGAGTATACTAGGGCGCTTGAGAGAACCATGTCGAAG 17442
Query 84 GAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGT 123
||||| |||||| |||||| |||||||||||| || ||||
Sbjct 17441 GAACTCGGCAAAATGACCCCGTAACTTCGGGAGAAGGGGT 17402
>seq3354
Length=110323
Score = 86.0 bits (94), Expect = 7e-15
Identities = 79/100 (79%), Gaps = 0/100 (0%)
Strand=Plus/Plus
Query 24 CAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAG 83
||||| |||||| || | || || ||||||| |||||||||| ||| || | |||
Sbjct 37013 CAAACCGACACAGGTGAACAAGTAGAGTATACTAGGGCGCTTGAGAGAACCATGTCGAAG 37072
Query 84 GAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGT 123
||||| |||||| |||||| |||||||||||| || ||||
Sbjct 37073 GAACTCGGCAAAATGACCCCGTAACTTCGGGAGAAGGGGT 37112
>seq1235
Length=88152
Score = 86.0 bits (94), Expect = 7e-15
Identities = 79/100 (79%), Gaps = 0/100 (0%)
Strand=Plus/Plus
Query 24 CAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAG 83
||||| |||||| || | || || ||||||| |||||||||| ||| || | |||
Sbjct 63823 CAAACCGACACAGGTGAACAAGTAGAGTATACTAGGGCGCTTGAGAGAACCATGTCGAAG 63882
Query 84 GAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGT 123
||||| |||||| |||||| |||||||||||| || ||||
Sbjct 63883 GAACTCGGCAAAATGACCCCGTAACTTCGGGAGAAGGGGT 63922
>seq403
Length=169495
Score = 86.0 bits (94), Expect = 7e-15
Identities = 79/100 (79%), Gaps = 0/100 (0%)
Strand=Plus/Plus
Query 24 CAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAG 83
||||| |||||| || | || || ||||||| |||||||||| ||| || | |||
Sbjct 20730 CAAACCGACACAGGTGAACAAGTAGAGTATACTAGGGCGCTTGAGAGAACCATGTCGAAG 20789
Query 84 GAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGT 123
||||| |||||| |||||| |||||||||||| || ||||
Sbjct 20790 GAACTCGGCAAAATGACCCCGTAACTTCGGGAGAAGGGGT 20829
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 530739355810
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |