Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fraxinus_20excelsior_20[genbank_20GCA_5F900149125.1_202017-01-20]
89,515 sequences; 867,455,155 total letters
Query= AAMG01000599.1
Length=180
Score E
Sequences producing significant alignments: (Bits) Value
seq69931 152 5e-35
seq26855 102 8e-20
seq89489 91.5 1e-16
seq3677 91.5 1e-16
seq3354 91.5 1e-16
seq1235 91.5 1e-16
seq403 91.5 1e-16
seq16560 89.7 5e-16
seq89515 87.8 2e-15
seq29172 84.2 2e-14
>seq69931
Length=2101
Score = 152 bits (168), Expect = 5e-35
Identities = 91/94 (97%), Gaps = 1/94 (1%)
Strand=Plus/Plus
Query 65 GCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTG 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 45 GCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTG 104
Query 125 TGACGCCTGCCCGGTGCCGGAAGGTTAATTGATG 158
||||||||||||||||| ||||| |||| |||||
Sbjct 105 TGACGCCTGCCCGGTGCTGGAAGATTAA-TGATG 137
>seq26855
Length=3797
Score = 102 bits (112), Expect = 8e-20
Identities = 82/99 (83%), Gaps = 0/99 (0%)
Strand=Plus/Minus
Query 57 ACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGT 116
|||||| | ||||||||||| |||||||||| |||||| || || ||| |||||
Sbjct 174 ACCAGGGGGTAGCGACTGTTTACCAAAAACACAGGGCTCTGCGAAGTCGCAAGACGACGT 115
Query 117 ATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAATTG 155
||||||| ||||||||||||||||| |||||||||| ||
Sbjct 114 ATAGGGTCTGACGCCTGCCCGGTGCTGGAAGGTTAAGTG 76
>seq89489
Length=184534
Score = 91.5 bits (100), Expect = 1e-16
Identities = 77/95 (81%), Gaps = 0/95 (0%)
Strand=Plus/Plus
Query 55 ATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGAC 114
|||||||| | ||||||||||||||||||||||| ||||||| || | || ||
Sbjct 78056 ATACCAGGGGGTAGCGACTGTTTATTAAAAACACAGGACTCTGCTAAGTGGTAACACGAT 78115
Query 115 GTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGT 149
|||||| || |||| |||||||||||| |||||||
Sbjct 78116 GTATAGAGTCTGACACCTGCCCGGTGCTGGAAGGT 78150
>seq3677
Length=63360
Score = 91.5 bits (100), Expect = 1e-16
Identities = 77/95 (81%), Gaps = 0/95 (0%)
Strand=Plus/Minus
Query 55 ATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGAC 114
|||||||| | ||||||||||||||||||||||| ||||||| || | || ||
Sbjct 17369 ATACCAGGGGGTAGCGACTGTTTATTAAAAACACAGGACTCTGCTAAGTGGTAACACGAT 17310
Query 115 GTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGT 149
|||||| || |||| |||||||||||| |||||||
Sbjct 17309 GTATAGAGTCTGACACCTGCCCGGTGCTGGAAGGT 17275
>seq3354
Length=110323
Score = 91.5 bits (100), Expect = 1e-16
Identities = 77/95 (81%), Gaps = 0/95 (0%)
Strand=Plus/Plus
Query 55 ATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGAC 114
|||||||| | ||||||||||||||||||||||| ||||||| || | || ||
Sbjct 37145 ATACCAGGGGGTAGCGACTGTTTATTAAAAACACAGGACTCTGCTAAGTGGTAACACGAT 37204
Query 115 GTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGT 149
|||||| || |||| |||||||||||| |||||||
Sbjct 37205 GTATAGAGTCTGACACCTGCCCGGTGCTGGAAGGT 37239
>seq1235
Length=88152
Score = 91.5 bits (100), Expect = 1e-16
Identities = 77/95 (81%), Gaps = 0/95 (0%)
Strand=Plus/Plus
Query 55 ATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGAC 114
|||||||| | ||||||||||||||||||||||| ||||||| || | || ||
Sbjct 63955 ATACCAGGGGGTAGCGACTGTTTATTAAAAACACAGGACTCTGCTAAGTGGTAACACGAT 64014
Query 115 GTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGT 149
|||||| || |||| |||||||||||| |||||||
Sbjct 64015 GTATAGAGTCTGACACCTGCCCGGTGCTGGAAGGT 64049
>seq403
Length=169495
Score = 91.5 bits (100), Expect = 1e-16
Identities = 77/95 (81%), Gaps = 0/95 (0%)
Strand=Plus/Plus
Query 55 ATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGAC 114
|||||||| | ||||||||||||||||||||||| ||||||| || | || ||
Sbjct 20862 ATACCAGGGGGTAGCGACTGTTTATTAAAAACACAGGACTCTGCTAAGTGGTAACACGAT 20921
Query 115 GTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGT 149
|||||| || |||| |||||||||||| |||||||
Sbjct 20922 GTATAGAGTCTGACACCTGCCCGGTGCTGGAAGGT 20956
>seq16560
Length=1890
Score = 89.7 bits (98), Expect = 5e-16
Identities = 75/92 (82%), Gaps = 4/92 (4%)
Strand=Plus/Plus
Query 68 GCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGA----AAGTGGACGTATAGGGT 123
||||||||||| |||||||||| |||||| || || ||| ||||||||||||
Sbjct 1115 GCGACTGTTTAGCAAAAACACAGGGCTCTGCTAAGTCGGCTTCAAGACGACGTATAGGGT 1174
Query 124 GTGACGCCTGCCCGGTGCCGGAAGGTTAATTG 155
|||||||||||||||||| ||||||||| ||
Sbjct 1175 CTGACGCCTGCCCGGTGCCTGAAGGTTAAGTG 1206
>seq89515
Length=155578
Score = 87.8 bits (96), Expect = 2e-15
Identities = 83/106 (78%), Gaps = 0/106 (0%)
Strand=Plus/Plus
Query 47 GGTCGAAGATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGA 106
||||| || |||||||| ||||||||||| |||||||||| ||| ||||| ||
Sbjct 108011 GGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCTCCGCAAAGTCGT 108070
Query 107 AAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152
||| | |||| ||| |||||||||||| |||||||||||| ||
Sbjct 108071 AAGACCATGTATGGGGGCTGACGCCTGCCCAGTGCCGGAAGGTCAA 108116
Score = 87.8 bits (96), Expect = 2e-15
Identities = 83/106 (78%), Gaps = 0/106 (0%)
Strand=Plus/Minus
Query 47 GGTCGAAGATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGA 106
||||| || |||||||| ||||||||||| |||||||||| ||| ||||| ||
Sbjct 133865 GGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCTCCGCAAAGTCGT 133806
Query 107 AAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152
||| | |||| ||| |||||||||||| |||||||||||| ||
Sbjct 133805 AAGACCATGTATGGGGGCTGACGCCTGCCCAGTGCCGGAAGGTCAA 133760
>seq29172
Length=4153
Score = 84.2 bits (92), Expect = 2e-14
Identities = 82/106 (77%), Gaps = 0/106 (0%)
Strand=Plus/Minus
Query 47 GGTCGAAGATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGA 106
|| || ||| |||||| | ||||||||||| ||||||||||| | ||| || ||
Sbjct 691 GGCCGCAGAGACCAGGGGGAAGCGACTGTTTACTAAAAACACAGGTCCGTGCGAAGTCGC 632
Query 107 AAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152
||| || ||||| || ||||||||||||||||| |||| |||||
Sbjct 631 AAGACGATGTATACGGACTGACGCCTGCCCGGTGCTGGAACGTTAA 586
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476386530215
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |