Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fraxinus_20excelsior_20[genbank_20GCA_5F900149125.1_202017-01-20] 89,515 sequences; 867,455,155 total letters Query= AAMG01000750.1 Length=102 Score E Sequences producing significant alignments: (Bits) Value seq43010 77.0 1e-12 seq28254 77.0 1e-12 seq9207 71.6 6e-11 seq2646 71.6 6e-11 seq1593 71.6 6e-11 seq781 71.6 6e-11 >seq43010 Length=958 Score = 77.0 bits (84), Expect = 1e-12 Identities = 51/57 (89%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCA 57 ||||||||||||||| ||||||||| |||||||||||||||| ||||||||| || Sbjct 578 GGAAAAGAAACTAACAAGGATTCCCCTAGTAACGGCGAGTGAAGCGGGAAGAGCTCA 522 >seq28254 Length=630 Score = 77.0 bits (84), Expect = 1e-12 Identities = 51/57 (89%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCA 57 ||||||||||||||| |||||||||| |||| ||||||| |||| |||| ||||||| Sbjct 250 GGAAAAGAAACTAACTAGGATTCCCTTAGTAGCGGCGAGCGAACCGGGATGAGCCCA 306 >seq9207 Length=9936 Score = 71.6 bits (78), Expect = 6e-11 Identities = 50/57 (88%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCA 57 |||||||||||| || ||||||||| |||||||||||| |||| ||||| |||||| Sbjct 4858 GGAAAAGAAACTTACAAGGATTCCCCTAGTAACGGCGAGCGAACCGGGAAAAGCCCA 4914 >seq2646 Length=71091 Score = 71.6 bits (78), Expect = 6e-11 Identities = 50/57 (88%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCA 57 |||||||||||| || ||||||||| |||||||||||| |||| ||||| |||||| Sbjct 7341 GGAAAAGAAACTTACAAGGATTCCCCTAGTAACGGCGAGCGAACCGGGAAAAGCCCA 7397 >seq1593 Length=76168 Score = 71.6 bits (78), Expect = 6e-11 Identities = 50/57 (88%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCA 57 |||||||||||| || ||||||||| |||||||||||| |||| ||||| |||||| Sbjct 31917 GGAAAAGAAACTTACAAGGATTCCCCTAGTAACGGCGAGCGAACCGGGAAAAGCCCA 31861 >seq781 Length=108814 Score = 71.6 bits (78), Expect = 6e-11 Identities = 50/57 (88%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCA 57 |||||||||||| || ||||||||| |||||||||||| |||| ||||| |||||| Sbjct 858 GGAAAAGAAACTTACAAGGATTCCCCTAGTAACGGCGAGCGAACCGGGAAAAGCCCA 802 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 230206647600