Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fraxinus_20excelsior_20[genbank_20GCA_5F900149125.1_202017-01-20]
89,515 sequences; 867,455,155 total letters
Query= AAMG01001138.1
Length=202
Score E
Sequences producing significant alignments: (Bits) Value
seq39137 125 8e-27
seq88695 120 3e-25
seq69931 118 1e-24
seq29172 118 1e-24
seq16560 116 4e-24
seq89515 107 2e-21
seq89489 107 2e-21
seq3677 107 2e-21
seq3354 107 2e-21
seq1235 107 2e-21
seq403 107 2e-21
seq13957 98.7 1e-18
seq26224 91.5 2e-16
seq6019 73.4 4e-11
>seq39137
Length=541
Score = 125 bits (138), Expect = 8e-27
Identities = 111/143 (78%), Gaps = 0/143 (0%)
Strand=Plus/Plus
Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82
|||||||||| ||||| |||| |||| ||||||| || || | ||||||| | |
Sbjct 399 CGGGGTCTTTCCGTCCTGCCGCGCGTAACGAGCATCTTTACTCGTAGTGCAATTTCGCCG 458
Query 83 AGCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142
|| || ||||||||||| ||| ||||||||||||||||||||||||||
Sbjct 459 AGTCCATGGTTGAGACAGCGCCCAAGTCGTTACTCCATTCGTGCAGGTCGGAACTTACCC 518
Query 143 GACAAGGAATTTCGCTACCTTAG 165
|||||||||||||||||||||||
Sbjct 519 GACAAGGAATTTCGCTACCTTAG 541
>seq88695
Length=830
Score = 120 bits (132), Expect = 3e-25
Identities = 110/143 (77%), Gaps = 0/143 (0%)
Strand=Plus/Minus
Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82
|||||||||| |||| | ||| || | | |||||||||| | | | |||||||||||
Sbjct 143 CGGGGTCTTTCCGTCTGACCGCAGGAACCCCGCATCTTCACGGGGAATTCAATTTCACTG 84
Query 83 AGCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142
|| | | | ||||||| ||| ||||||||||||||||||||||||||
Sbjct 83 AGTCTATGCTGGAGACAGCGGGGAGATCGTTACGCCATTCGTGCAGGTCGGAACTTACCC 24
Query 143 GACAAGGAATTTCGCTACCTTAG 165
|||||||||||||||||||||||
Sbjct 23 GACAAGGAATTTCGCTACCTTAG 1
>seq69931
Length=2101
Score = 118 bits (130), Expect = 1e-24
Identities = 116/151 (77%), Gaps = 2/151 (1%)
Strand=Plus/Minus
Query 24 GGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGA 83
||||||||| |||| |||||| | ||||| |||| | | | ||| ||| ||||
Sbjct 334 GGGGTCTTTCCGTCTTTCCGCGGGGAGATTGCATCATCACAAACATTTCAACTTCGCTGA 275
Query 84 G-CTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142
| |||| || ||||||| ||| ||||||||||||||||||||||||||
Sbjct 274 GTCTCA-GGAGGAGACAGTGTGGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCC 216
Query 143 GACAAGGAATTTCGCTACCTTAGGACCGTTA 173
|||||||||||||||||||||||||||||||
Sbjct 215 GACAAGGAATTTCGCTACCTTAGGACCGTTA 185
>seq29172
Length=4153
Score = 118 bits (130), Expect = 1e-24
Identities = 117/151 (77%), Gaps = 3/151 (2%)
Strand=Plus/Plus
Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82
|||||||||| ||||| |||| |||| ||||||| || || | ||||||| | |
Sbjct 371 CGGGGTCTTTCCGTCCTG-CGCGCGTAACGAGCATCTTTACTCGTAGTGCAATTTCGCCG 429
Query 83 AGCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142
|| || ||||||||||| ||| ||||||||||||||||||||||||||
Sbjct 430 AG-TCGTGGTTGAGACAGCGAGAAGTCGT-TACGCCATTCGTGCAGGTCGGAACTTACCC 487
Query 143 GACAAGGAATTTCGCTACCTTAGGACCGTTA 173
||||||||||||||||||||||||| ||||
Sbjct 488 GACAAGGAATTTCGCTACCTTAGGATGGTTA 518
>seq16560
Length=1890
Score = 116 bits (128), Expect = 4e-24
Identities = 120/164 (73%), Gaps = 13/164 (8%)
Strand=Plus/Minus
Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82
|||||||||| |||| | |||||||| || |||||||||| || | | ||||||| |||
Sbjct 1420 CGGGGTCTTTCCGTCTAACCGCGGGTACTCCGCATCTTCACGGAGAATTCAATTTCGCTG 1361
Query 83 AGCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142
||| | ||||||| ||| ||||||||||||||||||||||||||
Sbjct 1360 AGCATGTCCTGGAGACAGTGGGGAAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCC 1301
Query 143 GACAAGGAAT-------------TTCGCTACCTTAGGACCGTTA 173
|||||||||| |||||||||||||||||||||
Sbjct 1300 GACAAGGAATTTCGACAAGGAATTTCGCTACCTTAGGACCGTTA 1257
>seq89515
Length=155578
Score = 107 bits (118), Expect = 2e-21
Identities = 113/150 (75%), Gaps = 2/150 (1%)
Strand=Plus/Minus
Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84
|||||||| |||| || |||| || |||||||||| || | | ||||||| |||
Sbjct 108331 GGGTCTTTCTGTCCAGGTGCAGGTAGTCCGCATCTTCACAGACATGTCTATTTCACCGAG 108272
Query 85 CTCACGGTT-GAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCG 143
| | | | ||||||| ||| || ||||||| ||||||||||||||||
Sbjct 108271 C-CTCTCTCCGAGACAGTGCCCAGATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCG 108213
Query 144 ACAAGGAATTTCGCTACCTTAGGACCGTTA 173
||||||||||||||||||||||||||||||
Sbjct 108212 ACAAGGAATTTCGCTACCTTAGGACCGTTA 108183
Score = 107 bits (118), Expect = 2e-21
Identities = 113/150 (75%), Gaps = 2/150 (1%)
Strand=Plus/Plus
Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84
|||||||| |||| || |||| || |||||||||| || | | ||||||| |||
Sbjct 133545 GGGTCTTTCTGTCCAGGTGCAGGTAGTCCGCATCTTCACAGACATGTCTATTTCACCGAG 133604
Query 85 CTCACGGTT-GAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCG 143
| | | | ||||||| ||| || ||||||| ||||||||||||||||
Sbjct 133605 C-CTCTCTCCGAGACAGTGCCCAGATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCG 133663
Query 144 ACAAGGAATTTCGCTACCTTAGGACCGTTA 173
||||||||||||||||||||||||||||||
Sbjct 133664 ACAAGGAATTTCGCTACCTTAGGACCGTTA 133693
>seq89489
Length=184534
Score = 107 bits (118), Expect = 2e-21
Identities = 112/151 (74%), Gaps = 0/151 (0%)
Strand=Plus/Minus
Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82
||||||||| |||| || |||| || |||||||||| || | | ||||||||| |
Sbjct 78360 CGGGGTCTTACCGTCTAGCCGTTGGTACTCCGCATCTTCACGGAGAATTCAATTTCACCG 78301
Query 83 AGCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142
| || | ||||||| |||||||||||||||||||| ||||| |
Sbjct 78300 GGTCCATGTCGGAGACAGCGGGGCAGTCGTTACACCATTCGTGCAGGTCGCTACTTATGC 78241
Query 143 GACAAGGAATTTCGCTACCTTAGGACCGTTA 173
|||||||||||||||||||||||||| ||||
Sbjct 78240 GACAAGGAATTTCGCTACCTTAGGACAGTTA 78210
>seq3677
Length=63360
Score = 107 bits (118), Expect = 2e-21
Identities = 112/151 (74%), Gaps = 0/151 (0%)
Strand=Plus/Plus
Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82
||||||||| |||| || |||| || |||||||||| || | | ||||||||| |
Sbjct 17065 CGGGGTCTTACCGTCTAGCCGTTGGTACTCCGCATCTTCACGGAGAATTCAATTTCACCG 17124
Query 83 AGCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142
| || | ||||||| |||||||||||||||||||| ||||| |
Sbjct 17125 GGTCCATGTCGGAGACAGCGGGGCAGTCGTTACACCATTCGTGCAGGTCGCTACTTATGC 17184
Query 143 GACAAGGAATTTCGCTACCTTAGGACCGTTA 173
|||||||||||||||||||||||||| ||||
Sbjct 17185 GACAAGGAATTTCGCTACCTTAGGACAGTTA 17215
>seq3354
Length=110323
Score = 107 bits (118), Expect = 2e-21
Identities = 112/151 (74%), Gaps = 0/151 (0%)
Strand=Plus/Minus
Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82
||||||||| |||| || |||| || |||||||||| || | | ||||||||| |
Sbjct 37449 CGGGGTCTTACCGTCTAGCCGTTGGTACTCCGCATCTTCACGGAGAATTCAATTTCACCG 37390
Query 83 AGCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142
| || | ||||||| |||||||||||||||||||| ||||| |
Sbjct 37389 GGTCCATGTCGGAGACAGCGGGGCAGTCGTTACACCATTCGTGCAGGTCGCTACTTATGC 37330
Query 143 GACAAGGAATTTCGCTACCTTAGGACCGTTA 173
|||||||||||||||||||||||||| ||||
Sbjct 37329 GACAAGGAATTTCGCTACCTTAGGACAGTTA 37299
>seq1235
Length=88152
Score = 107 bits (118), Expect = 2e-21
Identities = 112/151 (74%), Gaps = 0/151 (0%)
Strand=Plus/Minus
Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82
||||||||| |||| || |||| || |||||||||| || | | ||||||||| |
Sbjct 64259 CGGGGTCTTACCGTCTAGCCGTTGGTACTCCGCATCTTCACGGAGAATTCAATTTCACCG 64200
Query 83 AGCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142
| || | ||||||| |||||||||||||||||||| ||||| |
Sbjct 64199 GGTCCATGTCGGAGACAGCGGGGCAGTCGTTACACCATTCGTGCAGGTCGCTACTTATGC 64140
Query 143 GACAAGGAATTTCGCTACCTTAGGACCGTTA 173
|||||||||||||||||||||||||| ||||
Sbjct 64139 GACAAGGAATTTCGCTACCTTAGGACAGTTA 64109
>seq403
Length=169495
Score = 107 bits (118), Expect = 2e-21
Identities = 112/151 (74%), Gaps = 0/151 (0%)
Strand=Plus/Minus
Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82
||||||||| |||| || |||| || |||||||||| || | | ||||||||| |
Sbjct 21166 CGGGGTCTTACCGTCTAGCCGTTGGTACTCCGCATCTTCACGGAGAATTCAATTTCACCG 21107
Query 83 AGCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142
| || | ||||||| |||||||||||||||||||| ||||| |
Sbjct 21106 GGTCCATGTCGGAGACAGCGGGGCAGTCGTTACACCATTCGTGCAGGTCGCTACTTATGC 21047
Query 143 GACAAGGAATTTCGCTACCTTAGGACCGTTA 173
|||||||||||||||||||||||||| ||||
Sbjct 21046 GACAAGGAATTTCGCTACCTTAGGACAGTTA 21016
>seq13957
Length=529
Score = 98.7 bits (108), Expect = 1e-18
Identities = 98/131 (75%), Gaps = 0/131 (0%)
Strand=Plus/Minus
Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82
|||||||||| ||||| |||| |||| ||||||| || || | ||||||| | |
Sbjct 131 CGGGGTCTTTCCGTCCTGCCGCGCGTAACGAGCATCTTTACTCGTAGTGCAATTTCGCCG 72
Query 83 AGCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142
||| ||||||||||| ||| ||||||||||||||||||||||||||
Sbjct 71 AGCCTGTGGTTGAGACAGCTGAGAAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCC 12
Query 143 GACAAGGAATT 153
|||||||||||
Sbjct 11 GACAAGGAATT 1
>seq26224
Length=1148
Score = 91.5 bits (100), Expect = 2e-16
Identities = 56/60 (93%), Gaps = 0/60 (0%)
Strand=Plus/Plus
Query 114 ACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 173
|| || ||||||| ||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 927 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGATACCTTAGGACCGTTA 986
>seq6019
Length=10820
Score = 73.4 bits (80), Expect = 4e-11
Identities = 52/60 (87%), Gaps = 0/60 (0%)
Strand=Plus/Plus
Query 114 ACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 173
||||| |||||||||||||||||||| || ||||||||||| |||||||||| ||||
Sbjct 6861 ACACCTTTCGTGCAGGTCGGAACTTATTTGATAAGGAATTTCGTTACCTTAGGATAGTTA 6920
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 546725480985
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |