Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fraxinus_20excelsior_20[genbank_20GCA_5F900149125.1_202017-01-20] 89,515 sequences; 867,455,155 total letters Query= AAMG01001756.1 Length=319 Score E Sequences producing significant alignments: (Bits) Value seq2600 131 3e-28 >seq2600 Length=118003 Score = 131 bits (144), Expect = 3e-28 Identities = 203/289 (70%), Gaps = 16/289 (6%) Strand=Plus/Plus Query 1 CGAGTCAATGTCCTAGGGCATGTGTAGGGGTG------GGTAAAAATGGAAATTTGAAAT 54 ||||||||||||| || ||||||| || ||| | ||| | |||||| || | | Sbjct 92495 CGAGTCAATGTCCGAGATCATGTGTTGGCGTGTTGGGGGATAAGAGTGGAAACTTAATTT 92554 Query 55 GTTGGGGAGAGTCCGACCCGAATGTTAAAGTCGGAGCATGCGGTGTGGATCTTGGTGATG 114 | |||| |||| ||| || ||| ||| || | || ||| | || |||| ||| Sbjct 92555 GCTGGGCGGAGTTAGACTCGGGTGTGCGAGTGGGGACGTGTGGTTTCGAGGTTGGAGATC 92614 Query 115 GGACCTTGGTTACCGGGTCGGTTTATCAAGGGGCCCCACATGGGTTCTTCTTAGTAAATA 174 ||| | ||||||| ||||| | |||||| || || |||||||||||||| || || || Sbjct 92615 GGAGCCTGGTTACAGGGTCAGCTTATCAGGGCGCACCACATGGGTTCTTTTTGGTGGAT- 92673 Query 175 ACAACAAAAAGGATGGGCAAAATAGTAAA---TTGACAAAGATTGATGTTCCTGATGAAT 231 || || || ||||||||| | ||| ||| || || ||||| | || | Sbjct 92674 -----AAGAAAGAAGGGCAAAATGGAAAACTCGTGAAAATCATCGATGTGTCGCTCGATT 92728 Query 232 TTTCTGGATTTGTGCAATCTGGATGCTGTGTGGAGATCTGA-AATTTTG 279 ||||||| |||| ||||| |||||||||||||| || | | ||||||| Sbjct 92729 TTTCTGGTCTTGTACAATCAGGATGCTGTGTGGAAATTTAAGAATTTTG 92777 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 917577894240