Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fraxinus_20excelsior_20[genbank_20GCA_5F900149125.1_202017-01-20] 89,515 sequences; 867,455,155 total letters Query= AAMG01001844.1 Length=290 Score E Sequences producing significant alignments: (Bits) Value seq61936 255 1e-65 seq29172 248 1e-63 seq66647 197 2e-48 seq89515 158 2e-36 seq89489 143 4e-32 seq53182 131 3e-28 seq66866 80.6 4e-13 seq42346 78.8 2e-12 >seq61936 Length=1449 Score = 255 bits (282), Expect = 1e-65 Identities = 232/291 (80%), Gaps = 1/291 (0%) Strand=Plus/Minus Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60 ||||||||||||| |||||||||||||| |||||| | ||||||||||||||||||| Sbjct 1104 CCCACGCTTTCGCACCTCAGCGTCAGTTGTGGTCCAGTGAGCCGCCTTCGCCACTGGTGT 1045 Query 61 TCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCAC 120 |||| || ||||||||| |||||||| |||||| || |||||| | ||||| | ||| Sbjct 1044 TCCTGCGAATATCTACGAATTTCACCTCTACACTCGCAATTCCACTCACCTCTACCACAC 985 Query 121 TCAAGAAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGA-C 179 |||||| | |||| ||||| |||| ||||||||||| | |||||| |||| | Sbjct 984 TCAAGACACCCAGTATCAAAGGCAGTTCCGGGGTTGAGCCCCGGGATTTCACCCCTGACC 925 Query 180 TTGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTAC 239 || | |||||||| || |||||| |||| ||| |||| | |||||| ||| ||| | Sbjct 924 TTAAATGTCCGCCTACGTGCGCTTTACGCCCAGTAATTCCGAACAACGCTAGCCCCCTTC 865 Query 240 GTATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290 ||||||||||||||||||||||| ||||||||| ||||| ||| | |||| Sbjct 864 GTATTACCGCGGCTGCTGGCACGAAGTTAGCCGGGGCTTCTTCTCCGGGTA 814 >seq29172 Length=4153 Score = 248 bits (274), Expect = 1e-63 Identities = 229/290 (79%), Gaps = 0/290 (0%) Strand=Plus/Plus Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60 ||||||||||||| |||||||||||||| || |||| | ||||||||||||| ||||| Sbjct 3795 CCCACGCTTTCGCTCCTCAGCGTCAGTTGTTGCCCAGAGACCCGCCTTCGCCACCGGTGT 3854 Query 61 TCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCAC 120 |||||| |||||| |||||||||||||||||| |||||||| | || || || ||| Sbjct 3855 TCCTCCTGATATCTGCGCATTTCACCGCTACACCAGGAATTCCAGTCTCCCCTGCAACAC 3914 Query 121 TCAAGAAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACT 180 ||||| | || || | ||||| | | ||||||| | | ||||||| | ||| Sbjct 3915 TCAAGTCTGCCCGTATCGACTGCAGACCCGGAGTTGAGCTCCGGGCTTTCACAGCCGACG 3974 Query 181 TGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACG 240 | | |||||||| || |||||| |||||||| |||||| ||||||||| |||||| Sbjct 3975 CGACAAACCGCCTACGAGCTCTTTACGCCCAATAATTCCGGACAACGCTTGCACCCTACG 4034 Query 241 TATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290 ||||||||||||||||||||||||||| |||| |||| ||| |||||| Sbjct 4035 TATTACCGCGGCTGCTGGCACGTAGTTGGCCGGTGCTTCTTCTGCAGGTA 4084 >seq66647 Length=1168 Score = 197 bits (218), Expect = 2e-48 Identities = 210/277 (76%), Gaps = 0/277 (0%) Strand=Plus/Plus Query 6 GCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGTTCCTC 65 ||||||| ||| |||||||||| |||||| | || ||||||| |||||||| Sbjct 312 GCTTTCGAACCTGAGCGTCAGTTTGCGTCCAGAAGGGTGCTTTCGCCATGGGTGTTCCGA 371 Query 66 CGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCACTCAAG 125 | ||||| ||||||||||||||||||| | |||| | ||||||| ||||||| Sbjct 372 CACATATCAACGCATTTCACCGCTACACGTGTCGTTCCCCCTTCCTCTCCGCTACTCAAG 431 Query 126 AAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACTTGCCT 185 | |||| | | ||| | | ||||||| | | |||||| || |||| | Sbjct 432 ACTGCCAGTATAGGAAGCAATGTTGGAGTTGAGCTCCGACCTTTCACTTCCTACTTAACA 491 Query 186 TCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTA 245 |||||| | | |||||| |||| |||||||||| |||||||||||||||||||||| Sbjct 492 GTCCGCCTGCGTTCGCTTTACGCCCAGTAAATCCGGACAACGCTTGCCACCTACGTATTA 551 Query 246 CCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTC 282 ||||||||||||||||||||||||||||||||||||| Sbjct 552 CCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTC 588 >seq89515 Length=155578 Score = 158 bits (174), Expect = 2e-36 Identities = 206/285 (72%), Gaps = 0/285 (0%) Strand=Plus/Minus Query 6 GCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGTTCCTC 65 ||||||| ||||| |||||| | | |||||| || |||||| |||||||| | Sbjct 103064 GCTTTCGTCTCTCAGTGTCAGTGTCGGCCCAGCAGAGTGCTTTCGCCGTTGGTGTTCTTT 103005 Query 66 CGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCACTCAAG 125 | || |||||||||||||||||| ||| | |||||| |||| || | | |||| || Sbjct 103004 CCGATCTCTACGCATTTCACCGCTCCACCGGAAATTCCCTCTGCCCCTACCGTACTCCAG 102945 Query 126 AAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACTTGCCT 185 |||||| | || | ||||||||||| | ||| || | ||||| Sbjct 102944 CTTGGTAGTTTCCACCGCCTGTCCAGGGTTGAGCCCTGGGATTTGACGGCGGACTTAAAA 102885 Query 186 TCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTA 245 || |||||| | |||||| |||||| | |||||||||||||||| ||| || ||| Sbjct 102884 AGCCACCTACAGACGCTTTACGCCCAATCATTCCGGATAACGCTTGCATCCTCTGTCTTA 102825 Query 246 CCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290 |||||||||||||||| ||||||||| ||||||||| ||| || Sbjct 102824 CCGCGGCTGCTGGCACAGAGTTAGCCGATGCTTATTCCCCAGATA 102780 Score = 158 bits (174), Expect = 2e-36 Identities = 206/285 (72%), Gaps = 0/285 (0%) Strand=Plus/Plus Query 6 GCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGTTCCTC 65 ||||||| ||||| |||||| | | |||||| || |||||| |||||||| | Sbjct 138812 GCTTTCGTCTCTCAGTGTCAGTGTCGGCCCAGCAGAGTGCTTTCGCCGTTGGTGTTCTTT 138871 Query 66 CGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCACTCAAG 125 | || |||||||||||||||||| ||| | |||||| |||| || | | |||| || Sbjct 138872 CCGATCTCTACGCATTTCACCGCTCCACCGGAAATTCCCTCTGCCCCTACCGTACTCCAG 138931 Query 126 AAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACTTGCCT 185 |||||| | || | ||||||||||| | ||| || | ||||| Sbjct 138932 CTTGGTAGTTTCCACCGCCTGTCCAGGGTTGAGCCCTGGGATTTGACGGCGGACTTAAAA 138991 Query 186 TCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTA 245 || |||||| | |||||| |||||| | |||||||||||||||| ||| || ||| Sbjct 138992 AGCCACCTACAGACGCTTTACGCCCAATCATTCCGGATAACGCTTGCATCCTCTGTCTTA 139051 Query 246 CCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290 |||||||||||||||| ||||||||| ||||||||| ||| || Sbjct 139052 CCGCGGCTGCTGGCACAGAGTTAGCCGATGCTTATTCCCCAGATA 139096 >seq89489 Length=184534 Score = 143 bits (158), Expect = 4e-32 Identities = 206/288 (72%), Gaps = 8/288 (3%) Strand=Plus/Plus Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60 |||| |||||||| || ||||||| || |||| | | |||||||| ||| || Sbjct 134467 CCCATGCTTTCGCACCCCAGCGTCGGTAGGGACCCAGAGAGCTGCCTTCGCTTTTGGCGT 134526 Query 61 TCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCAC 120 |||| |||| |||| || |||||||| ||||||||| |||||| | ||||| ||| Sbjct 134527 TCCTTCGTAGATCTCCGGATTTCACCCCTACACACGAAATTCCACTCTCCTCTGTCTCAC 134586 Query 121 TCAAGAAAAACAGTTTCAAATGCAG---GCTATGGGTTGAGCCCATAGTTTTCACATCTG 177 ||||| || ||||| | ||| || | | || | | | |||||| | Sbjct 134587 TCAAGTGAATTGGTTTCGAGAGCATTCCGCCA--GTTTTTGGCGAC---TTTCACTTTCA 134641 Query 178 ACTTGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCT 237 || | | |||||||| ||||||||| |||| | | |||| | ||| |||||| || Sbjct 134642 ACCCGATTCACCGCCTACGTGCCCTTTACGCCCAGTCATTCCGAAGAACACTTGCCCCCC 134701 Query 238 ACGTATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTC 285 ||| |||||||||||||||||||| ||||||||| ||||| |||||| Sbjct 134702 CCGTCTTACCGCGGCTGCTGGCACGGAGTTAGCCGGGGCTTCTTCCTC 134749 >seq53182 Length=1096 Score = 131 bits (144), Expect = 3e-28 Identities = 177/247 (72%), Gaps = 0/247 (0%) Strand=Plus/Plus Query 44 GCCTTCGCCACTGGTGTTCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCC 103 || |||||| |||||||| | | || ||||||||||| |||||| ||| |||||| Sbjct 1 GCTTTCGCCGTTGGTGTTCTTTCCAATCTCTACGCATTTAACCGCTCCACCGAAAATTCC 60 Query 104 GATTGCCTCTCCAGCACTCAAGAAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCAT 163 |||| || | | |||| || |||||| | || | ||||||||||| Sbjct 61 CTCTGCCCCTACCGTACTCCAGCTTGGTAGTTTCCACCGCCTGTCCAGGGTTGAGCCCTG 120 Query 164 AGTTTTCACATCTGACTTGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGAT 223 || ||| || | ||||| || |||||| | ||||| |||||| | ||||||| Sbjct 121 AGATTTGACGGCGGACTTAAAAAGCCACCTACAGACGCTTTATGCCCAATCATTCCGGAT 180 Query 224 AACGCTTGCCACCTACGTATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCC 283 ||||||||| || || ||||||||||||||||||| ||||||||| ||||||||| Sbjct 181 AACGCTTGCATTCTCTGTCTTACCGCGGCTGCTGGCACAGAGTTAGCCGATGCTTATTCC 240 Query 284 TCAGGTA 290 ||| || Sbjct 241 CCAGATA 247 >seq66866 Length=7459 Score = 80.6 bits (88), Expect = 4e-13 Identities = 187/282 (66%), Gaps = 0/282 (0%) Strand=Plus/Plus Query 6 GCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGTTCCTC 65 ||||||| ||| | |||| | | | ||||||| || ||| | |||||||| | Sbjct 2331 GCTTTCGTCTCTCGGTGTCAATGTCGGCCCAGCAAAGTGCTTTCACTGTTGGTGTTCTTT 2390 Query 66 CGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCACTCAAG 125 | || ||||||||||||| |||| ||| | |||||| || || | | |||| || Sbjct 2391 CTGATCTCTACGCATTTCATCGCTCCACCGGAAATTCCCTCCACCCCTACCGTACTCCAG 2450 Query 126 AAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACTTGCCT 185 | |||||| | || | |||||||||| | ||| || | |||| Sbjct 2451 CTTGATAGTTTCCACCGCCTGTACAAGGTTGAGCCCTGGGATTTGACGGCGAACTTAAAA 2510 Query 186 TCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTA 245 || |||| | | |||| | | ||| | |||| |||| |||||| ||| || ||| Sbjct 2511 GGCCACCTATAGACGCTTTGCGTCAAATCATTCCGCATAAAGCTTGCATCCTCTGTCTTA 2570 Query 246 CCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTCAG 287 ||||| |||||||||| ||||||| ||||||| | ||| Sbjct 2571 CCGCGACTGCTGGCACAGAGTTAGCTAATGCTTATTTCCCAG 2612 >seq42346 Length=630 Score = 78.8 bits (86), Expect = 2e-12 Identities = 75/96 (78%), Gaps = 0/96 (0%) Strand=Plus/Plus Query 188 CCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACC 247 || |||||| | ||||||||||||| | |||| |||| |||||| ||| || ||||| Sbjct 227 CCACCTACAGACGCTTTACACCCAATCATTCCGCATAAAGCTTGCATCCTCTGTCTTACC 286 Query 248 GCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCC 283 ||| || ||||||| ||||||| ||||||||| Sbjct 287 GCGACTACTGGCACAGAGTTAGCTAATGCTTATTCC 322 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 828081284065