Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fraxinus_20excelsior_20[genbank_20GCA_5F900149125.1_202017-01-20]
89,515 sequences; 867,455,155 total letters
Query= AAMG01002194.1
Length=319
Score E
Sequences producing significant alignments: (Bits) Value
seq29172 143 5e-32
seq89515 138 2e-30
seq88846 114 2e-23
seq903 105 1e-20
seq26855 102 1e-19
seq6047 86.0 1e-14
seq1308 80.6 5e-13
seq89489 77.0 6e-12
seq3677 77.0 6e-12
seq3354 77.0 6e-12
seq403 77.0 6e-12
seq3494 75.2 2e-11
>seq29172
Length=4153
Score = 143 bits (158), Expect = 5e-32
Identities = 191/262 (73%), Gaps = 14/262 (5%)
Strand=Plus/Minus
Query 1 AGTGCACATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATA 60
|||||||||||||||||||||||| | || ||||||||||||| | || ||||| |
Sbjct 2652 AGTGCACATGGTGGATGCCTTGGCATCGAGAGCCGATGAAGGACGTTGGAGTCTGCGAAA 2593
Query 61 AGCTGCGGGGAG-TGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGG 119
||| |||| || ||| ||| | || ||||||| ||| |||||||||||||||||
Sbjct 2592 AGCCCCGGGAAGGTGA-CAACCGACCTGTGATCCGGGGATGTCCGAATGGGGAAACCC-- 2536
Query 120 CCCTTTGGGTCATTGCATG---------CTGAATACATAGGTATGCA-AAGCGAACGCGG 169
||| | | | || | ||||| ||||||| | | || ||||| ||
Sbjct 2535 ACCTGGAGTAAAGTCCAGGTACCTCTGTCTGAACACATAGGGCAGTAGGAGGGAACGTGG 2476
Query 170 CGAACTGAAACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTG 229
||| |||||||||| |||| | |||||| ||||| |||| | |||||| |||||||
Sbjct 2475 GGAAGTGAAACATCTCAGTACCCACAGGAAGAGAAAACAACAGTGATTCCGGTAGTAGTG 2416
Query 230 GCGAGCGAAATGGGATGAGCCT 251
|||||||||| ||| ||| ||
Sbjct 2415 GCGAGCGAAACTGGAAGAGGCT 2394
>seq89515
Length=155578
Score = 138 bits (152), Expect = 2e-30
Identities = 179/243 (74%), Gaps = 11/243 (5%)
Strand=Plus/Plus
Query 10 GGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTGCGGG 69
||||||| ||| ||| | || ||| ||||| ||||||| ||| | ||| ||||
Sbjct 106272 GGTGGATACCTAGGCACCCAGAGACGAGGAAGGGCGTAGTAATCGACGAAATGCTTCGGG 106331
Query 70 GAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGCCCTTTGGGT 129
|||| | ||| | | | |||||| ||||| |||||| ||| |||| ||| |
Sbjct 106332 GAGTT-GAAAATAAGCATAGATCCGGAGATTCCCGAATAGGGCAACC------TTTCGAA 106384
Query 130 CATTGCATGCTGAATACATAGGTATGCAA-AGCGAACGCGGCGAACTGAAACATCTAAGT 188
| ||| |||||||| ||| || | |||| || ||| ||||||||||||||||| |||
Sbjct 106385 C--TGC-TGCTGAATCCATGGGCAGGCAAGAGACAACCTGGCGAACTGAAACATCTTAGT 106441
Query 189 AGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAATGGGATGAG 248
||| ||||||||||| ||| | ||||||| ||||| |||||||||||||||| ||
Sbjct 106442 AGCCAGAGGAAAAGAAAGCAAAAGCGATTCCCGTAGTAGCGGCGAGCGAAATGGGAGCAG 106501
Query 249 CCT 251
|||
Sbjct 106502 CCT 106504
Score = 138 bits (152), Expect = 2e-30
Identities = 179/243 (74%), Gaps = 11/243 (5%)
Strand=Plus/Minus
Query 10 GGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTGCGGG 69
||||||| ||| ||| | || ||| ||||| ||||||| ||| | ||| ||||
Sbjct 135604 GGTGGATACCTAGGCACCCAGAGACGAGGAAGGGCGTAGTAATCGACGAAATGCTTCGGG 135545
Query 70 GAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGCCCTTTGGGT 129
|||| | ||| | | | |||||| ||||| |||||| ||| |||| ||| |
Sbjct 135544 GAGTT-GAAAATAAGCATAGATCCGGAGATTCCCGAATAGGGCAACC------TTTCGAA 135492
Query 130 CATTGCATGCTGAATACATAGGTATGCAA-AGCGAACGCGGCGAACTGAAACATCTAAGT 188
| ||| |||||||| ||| || | |||| || ||| ||||||||||||||||| |||
Sbjct 135491 C--TGC-TGCTGAATCCATGGGCAGGCAAGAGACAACCTGGCGAACTGAAACATCTTAGT 135435
Query 189 AGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAATGGGATGAG 248
||| ||||||||||| ||| | ||||||| ||||| |||||||||||||||| ||
Sbjct 135434 AGCCAGAGGAAAAGAAAGCAAAAGCGATTCCCGTAGTAGCGGCGAGCGAAATGGGAGCAG 135375
Query 249 CCT 251
|||
Sbjct 135374 CCT 135372
>seq88846
Length=528
Score = 114 bits (126), Expect = 2e-23
Identities = 92/110 (84%), Gaps = 7/110 (6%)
Strand=Plus/Plus
Query 11 GTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTGCGG-- 68
|||||||||||||| ||||||||||||||||||| | | |||||||||||||||
Sbjct 369 GTGGATGCCTTGGCATGTACAGGCGATGAAGGACGTGGCACGCTGCGATAAGCTGCGGTG 428
Query 69 -GGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCC 117
|| |||||||| |||||| ||||||||||||||||||||||||||
Sbjct 429 AGGTGTGAGCAA----CCTTTGACCCGCAGATTTCCGAATGGGGAAACCC 474
>seq903
Length=237473
Score = 105 bits (116), Expect = 1e-20
Identities = 94/115 (82%), Gaps = 2/115 (2%)
Strand=Plus/Minus
Query 137 TGCTGAATACATAGGTATGCAA-AGCGAACGCGGCGAACTGAAACATCTAAGTAGCTGCA 195
|||||||| ||| || | |||| || ||| |||||||||||||||||| |||||| |
Sbjct 1473 TGCTGAATCCATGGGCAGGCAAGAGACAAC-CGGCGAACTGAAACATCTTAGTAGCCAGA 1415
Query 196 GGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAATGGGATGAGCC 250
|||||||||| ||| | ||||| || ||||| |||||||||||||||| ||||
Sbjct 1414 GGAAAAGAAAGCAAAAGTGATTCTCATAGTAGCGGCGAGCGAAATGGGAATAGCC 1360
>seq26855
Length=3797
Score = 102 bits (112), Expect = 1e-19
Identities = 82/99 (83%), Gaps = 0/99 (0%)
Strand=Plus/Minus
Query 140 TGAATACATAGGTATGCAAAGCGAACGCGGCGAACTGAAACATCTAAGTAGCTGCAGGAA 199
|||||||||||| | |||||||| ||| ||||||||||||||||||| | | |||||
Sbjct 1722 TGAATACATAGGGGTTAGAAGCGAACTCGGGGAACTGAAACATCTAAGTACCCGAAGGAA 1663
Query 200 AAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAA 238
| || ||||||||||| ||| ||||| ||||||||||
Sbjct 1662 AGGACATCAACCGAGACTCCGTCAGTAGCGGCGAGCGAA 1624
Score = 95.1 bits (104), Expect = 2e-17
Identities = 92/117 (79%), Gaps = 1/117 (1%)
Strand=Plus/Minus
Query 1 AGTGCACATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATA 60
|| ||| ||||| |||||||||| |||||||||||||||||| || |||||||
Sbjct 1933 AGGGCATCTGGTGAATGCCTTGGCACACACAGGCGATGAAGGACGTGATACGCTGCGATA 1874
Query 61 AGCTGCGGGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCC 117
||| |||||| || || | |||||||||| |||||||||||||||||||||
Sbjct 1873 AGCCATGGGGAG-CTGCGAATAAGCTTTGATCCGTGGATTTCCGAATGGGGAAACCC 1818
>seq6047
Length=151485
Score = 86.0 bits (94), Expect = 1e-14
Identities = 87/111 (78%), Gaps = 3/111 (3%)
Strand=Plus/Plus
Query 137 TGCTGAATACATAGGTATGCAA-AGCGAACGCGGCGAACTGAAACATCTAAGTAGCTGCA 195
|||||||| ||| || | |||| || || ||||||||| |||||||| |||||| |
Sbjct 133536 TGCTGAATCCATGGGCAAGCAAGAGACGACCCGGCGAACTAAAACATCTTAGTAGCCAAA 133595
Query 196 GGAAAAGAAAT--CAACCGAGATTCCCAAAGTAGTGGCGAGCGAAATGGGA 244
|||||| ||| ||| | |||||||| ||||| ||| ||||||||||||
Sbjct 133596 GGAAAAAAAAGAACAAAAGCGATTCCCATAGTAGCGGCAAGCGAAATGGGA 133646
>seq1308
Length=125535
Score = 80.6 bits (88), Expect = 5e-13
Identities = 135/191 (71%), Gaps = 11/191 (6%)
Strand=Plus/Plus
Query 62 GCTGCGGGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGCC 121
||| |||||||| | ||| | | | |||||| ||||| |||||| || |||||
Sbjct 83199 GCTTCGGGGAGTT-GAAAATAAGCATAGATCCGAAGATTCCCGAATAGGAAAACC----- 83252
Query 122 CTTTGGGTCATTGCATGCTGAATACATAGGTATGCAAAGCGAACGC-GGCGAACTGAAAC 180
||| | | | | || ||||| |||||| | |||| | | | |||||||||||||
Sbjct 83253 -TTTCGAAC--TAC-TGTTGAATCCATAGGCAGGCAAGACACAATCTGGCGAACTGAAAC 83308
Query 181 ATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAAT 240
|||| ||||||| ||||||||||| ||| | |||| | ||||| ||| |||||
Sbjct 83309 ATCTTAGTAGCTAGAGGAAAAGAAAGCAAAAGTGATTTTCGTAGTAGCAACGAATGAAAT 83368
Query 241 GGGATGAGCCT 251
| || |||||
Sbjct 83369 GAGAGCAGCCT 83379
>seq89489
Length=184534
Score = 77.0 bits (84), Expect = 6e-12
Identities = 63/77 (82%), Gaps = 0/77 (0%)
Strand=Plus/Plus
Query 169 GCGAACTGAAACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGT 228
|||||||||||||||| ||||||| ||||| |||||||||||||| || |||||
Sbjct 75915 GCGAACTGAAACATCTGAGTAGCTAAAGGAAGGGAAATCAACCGAGACCCCGTTAGTAGC 75974
Query 229 GGCGAGCGAAATGGGAT 245
||||||||| | ||||
Sbjct 75975 GGCGAGCGAGAGCGGAT 75991
>seq3677
Length=63360
Score = 77.0 bits (84), Expect = 6e-12
Identities = 63/77 (82%), Gaps = 0/77 (0%)
Strand=Plus/Minus
Query 169 GCGAACTGAAACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGT 228
|||||||||||||||| ||||||| ||||| |||||||||||||| || |||||
Sbjct 19510 GCGAACTGAAACATCTGAGTAGCTAAAGGAAGGGAAATCAACCGAGACCCCGTTAGTAGC 19451
Query 229 GGCGAGCGAAATGGGAT 245
||||||||| | ||||
Sbjct 19450 GGCGAGCGAGAGCGGAT 19434
>seq3354
Length=110323
Score = 77.0 bits (84), Expect = 6e-12
Identities = 63/77 (82%), Gaps = 0/77 (0%)
Strand=Plus/Plus
Query 169 GCGAACTGAAACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGT 228
|||||||||||||||| ||||||| ||||| |||||||||||||| || |||||
Sbjct 35004 GCGAACTGAAACATCTGAGTAGCTAAAGGAAGGGAAATCAACCGAGACCCCGTTAGTAGC 35063
Query 229 GGCGAGCGAAATGGGAT 245
||||||||| | ||||
Sbjct 35064 GGCGAGCGAGAGCGGAT 35080
>seq403
Length=169495
Score = 77.0 bits (84), Expect = 6e-12
Identities = 63/77 (82%), Gaps = 0/77 (0%)
Strand=Plus/Plus
Query 169 GCGAACTGAAACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGT 228
|||||||||||||||| ||||||| ||||| |||||||||||||| || |||||
Sbjct 18721 GCGAACTGAAACATCTGAGTAGCTAAAGGAAGGGAAATCAACCGAGACCCCGTTAGTAGC 18780
Query 229 GGCGAGCGAAATGGGAT 245
||||||||| | ||||
Sbjct 18781 GGCGAGCGAGAGCGGAT 18797
>seq3494
Length=183798
Score = 75.2 bits (82), Expect = 2e-11
Identities = 67/84 (80%), Gaps = 0/84 (0%)
Strand=Plus/Plus
Query 168 GGCGAACTGAAACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAG 227
||||||||||||||||| ||||| ||||||||||| ||| | |||||| | |||
Sbjct 178070 GGCGAACTGAAACATCTTAGTAGTCAGAGGAAAAGAAAACAAAAGCTATTCCCGTAATAG 178129
Query 228 TGGCGAGCGAAATGGGATGAGCCT 251
||||||||||||||| || |||
Sbjct 178130 CAGCGAGCGAAATGGGAGGAACCT 178153
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 917577894240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |