Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fraxinus_20excelsior_20[genbank_20GCA_5F900149125.1_202017-01-20] 89,515 sequences; 867,455,155 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq257 699 0.0 seq1593 600 4e-169 seq459 322 2e-85 seq976 185 3e-44 seq1960 163 9e-38 seq2667 114 4e-23 seq80277 104 8e-20 seq17434 104 8e-20 seq601 104 8e-20 seq89489 75.2 4e-11 seq3677 75.2 4e-11 seq3354 75.2 4e-11 seq1235 75.2 4e-11 seq403 75.2 4e-11 >seq257 Length=231356 Score = 699 bits (774), Expect = 0.0 Identities = 478/532 (90%), Gaps = 6/532 (1%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| || || ||| ||||||||||||||| |||| | ||||||||||||||||||| Sbjct 51946 CTTCTGTTCCACACGAGATTTCTGTTCTCGTTGAGCTCATCTTAGGACACCTGCGTTATC 52005 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 52006 TTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCCGCCCGGATC 52065 Query 127 GGCCCGCGAAG-GA-CCTTAACGCCAGAAA-ATGGTCGGTGAAGACCAGTTCCGCTTCAT 183 ||||||| || || |||| ||| ||| | || | ||| || |||| |||| Sbjct 52066 GGCCCGCAGAGCGAGCCTTGGGTCCAAAAAGAGGGGCAGTGCC--CCGCCTCCGATTCAC 52123 Query 184 TGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCAC 243 || ||||||||| |||| ||| ||||||||||||||||| |||| |||||||||| Sbjct 52124 GGAATAAGTAAAATAACGTTAAAAGTAGTGGTATTTCACTTTCGCCTTT-CGGCTCCCAC 52182 Query 244 TTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTC 303 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 52183 TTATCCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTC 52242 Query 304 TTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAG 363 |||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||| Sbjct 52243 TTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAG 52302 Query 364 ATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGC 423 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 52303 ACAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGC 52362 Query 424 ATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATT 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 52363 ATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATT 52422 Query 484 TCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATC 535 ||||||||||||||||||||||||||||||||||||||||||||| | |||| Sbjct 52423 TCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTTAGCATC 52474 >seq1593 Length=76168 Score = 600 bits (664), Expect = 4e-169 Identities = 377/406 (93%), Gaps = 3/406 (1%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 75766 CTTTTGCTCTACTGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 75825 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 75826 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCAACCCGGATC 75885 Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGA 186 ||||| |||||||||||||||| |||| ||| | |||| | |||| |||||||||| || Sbjct 75886 GGCCCACGAAGGACCTTAACGCTAGAAGTTGGACTGTGAGGTCCAGCTCCGCTTCATCGA 75945 Query 187 TTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTA 246 ||||||||||||||||||||||||||||||||||| |||||||| |||||||| || Sbjct 75946 ATAAGTAAAAAAACGATAAGGGTAGTGGTATTTCACCGGCGCCGAA---GCTCCCACCTA 76002 Query 247 TTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTC 306 ||||||||| | | ||| |||||||| ||| ||||||||||||||||||||||||||| Sbjct 76003 TTCTACACCCCCTATGTCTTTTCACAATGTCAAACTAGAGTCAAGCTCAACAGGGTCTTC 76062 Query 307 TTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATA 366 |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 76063 TTTCCCCGCTGATTTGGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATA 76122 Query 367 GGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTA 412 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 76123 GGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTA 76168 >seq459 Length=223085 Score = 322 bits (356), Expect = 2e-85 Identities = 201/216 (93%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 320 TCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAA 379 || ||||||||||||||||||||||||||||| || ||||||||||||| |||||| ||| Sbjct 212160 TCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCACTGGATAGTAGATAGGAACAGTGAGAA 212101 Query 380 TCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAG 439 |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| Sbjct 212100 TCTCGTTAATCCATACAAGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAG 212041 Query 440 AGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATT 499 |||||| |||||||||||||| |||||||||||||||||||||||||||| ||||||||| Sbjct 212040 AGAGTCGTAGTTACTCCCGCCATTTACCCGCGCTTGGTTGAATTTCTTCATTTTGACATT 211981 Query 500 CAGAGCACTGGGCAGAAATCACATTGCGTCAACATC 535 ||||||||||||| |||||||||||| | | |||| Sbjct 211980 TAGAGCACTGGGCATAAATCACATTGCCTTAGCATC 211945 >seq976 Length=189346 Score = 185 bits (204), Expect = 3e-44 Identities = 134/154 (87%), Gaps = 1/154 (1%) Strand=Plus/Minus Query 179 TTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCT 238 |||| || ||| ||||| |||| ||| |||||||||||| |||| ||| ||||| Sbjct 120770 TTCACGGAATAAATAAAATAACGTTAAAAGTAGTGGTATTTTACTTTTGCCTTT-CGGCT 120712 Query 239 CCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACA 298 ||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 120711 CCCACTTATCCTACACCTCTCAAATCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACA 120652 Query 299 GGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCG 332 |||| ||||||||||| |||||| |||||||||| Sbjct 120651 GGGTTTTCTTTCCCCGTTGATTCTGCCAAGCCCG 120618 >seq1960 Length=107441 Score = 163 bits (180), Expect = 9e-38 Identities = 213/286 (74%), Gaps = 8/286 (3%) Strand=Plus/Plus Query 16 TACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATGGTTTAACAG 75 |||| ||||||||||||||| ||| | |||||||||||| ||||| |||||||| Sbjct 47148 TACACGAGATTTCTGTTCTCATTGAATTTATCTTAGGACACCTATGTTATCATTTAACAG 47207 Query 76 ATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATCGGCCCGCGA 135 ||||| | |||| ||||||| || |||| |||||||| || | |||||| || ||| Sbjct 47208 ATGTGTTGTCCCAACCAAACTTCC-ACCTAACAATGTCTTCCGCTTGGATCGTCCT-CGA 47265 Query 136 AG-GA-CCTTAACGCCAGAAA-ATGGTCGGTGAAGACCAGTTCCGCTTCATTGATTAAGT 192 || || |||| ||| ||| |||| | || || ||| |||| || ||||| Sbjct 47266 AGTGAGCCTTGGGTCCAAAAAGATGGACAATGCC--CCGCCTCCAATTCACGGAATAAGT 47323 Query 193 aaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTATTCTAC 252 |||| ||| ||| ||||| | |||||||| | | ||||| ||||||| |||| Sbjct 47324 AAAATAACATTAAAAGTAGTAGCGTTTCACTTTCATCTTTT-GGCTCTCACTTATCCTAC 47382 Query 253 ACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACA 298 |||||| || |||||||| |||||| ||||||||||||| |||||| Sbjct 47383 ACCTCTTAACTCATTTCATAAAGTCAGACTAGAGTCAAGTTCAACA 47428 >seq2667 Length=66065 Score = 114 bits (126), Expect = 4e-23 Identities = 104/131 (79%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| | ||| || ||||||||| || ||||| | ||||||||| ||| |||| Sbjct 28171 CTTTTGTTACACATGATATTTCTGTTTTCGTTGAGTTCATCTTAGGACATATGCTTTATC 28112 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 ||||| |||||||||| | |||||||||| |||||||||||||| || ||| |||| Sbjct 28111 TTTTAATAGATGTGCCGTCTCAGCCAAACTTATCACCTGACAATGTCTTCTGCCCTGATC 28052 Query 127 GGCCCGCGAAG 137 ||||||| ||| Sbjct 28051 GGCCCGCAAAG 28041 >seq80277 Length=8453 Score = 104 bits (114), Expect = 8e-20 Identities = 140/191 (73%), Gaps = 3/191 (2%) Strand=Plus/Minus Query 174 TCCGCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAA 233 |||| ||||| | ||||||||| || || ||| |||| |||||||| ||| Sbjct 643 TCCGATTCATGAAATAAGTAAAACAATATTATAAGTACTGGTGTTTCACTTTTGCCTTTT 584 Query 234 CGGCTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCT 293 ||||||||||||||| || | || ||||||||||||||| ||| | ||||||||| Sbjct 583 TAACTCCCACTTATTCTA-ACATGTCG-GTCATTTCACAAAGTTGGATTGCAGTCAAGCT 526 Query 294 CAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGC 353 |||| |||| || || | | | ||| || | |||| ||||||||||| ||||||| | Sbjct 525 CAACTGGGTTTTTTTGGCTCTTTAATTGTGCAATGCCC-TTCCCTTGGCTTTGGTTTCAC 467 Query 354 TAGATAGTAGA 364 ||||| || Sbjct 466 CGTATAGTGGA 456 >seq17434 Length=1321 Score = 104 bits (114), Expect = 8e-20 Identities = 65/70 (93%), Gaps = 0/70 (0%) Strand=Plus/Plus Query 382 TCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAG 441 ||||| ||||||||||| || ||||||||||||||||||| ||||||||||||||||||| Sbjct 187 TCGTTGATCCATTCATGTGCATCACTAATTAGATGACGAGACATTTGGCTACCTTAAGAG 246 Query 442 AGTCATAGTT 451 |||| ||||| Sbjct 247 AGTCGTAGTT 256 >seq601 Length=79031 Score = 104 bits (114), Expect = 8e-20 Identities = 65/70 (93%), Gaps = 0/70 (0%) Strand=Plus/Plus Query 382 TCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAG 441 |||||||||||||||||||| ||||||||||||||||||| ||||| |||| ||||||| Sbjct 77602 TCGTTAATCCATTCATGCGCATCACTAATTAGATGACGAGACATTTTGCTATTTTAAGAG 77661 Query 442 AGTCATAGTT 451 |||||||||| Sbjct 77662 AGTCATAGTT 77671 >seq89489 Length=184534 Score = 75.2 bits (82), Expect = 4e-11 Identities = 76/99 (77%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 369 GACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTG 428 ||||| ||| |||||| |||||| ||| ||| ||| ||| ||| ||| |||| Sbjct 78287 GACAGCGGGGCAGTCGTTACACCATTCGTGCAGGTCGCTACTTATGCGACAAGGAATTTC 78228 Query 429 GCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACC 467 ||||||||| || ||| | ||||||| |||||||||||| Sbjct 78227 GCTACCTTAGGACAGTTAGAGTTACTGCCGCCGTTTACC 78189 >seq3677 Length=63360 Score = 75.2 bits (82), Expect = 4e-11 Identities = 76/99 (77%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 369 GACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTG 428 ||||| ||| |||||| |||||| ||| ||| ||| ||| ||| ||| |||| Sbjct 17138 GACAGCGGGGCAGTCGTTACACCATTCGTGCAGGTCGCTACTTATGCGACAAGGAATTTC 17197 Query 429 GCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACC 467 ||||||||| || ||| | ||||||| |||||||||||| Sbjct 17198 GCTACCTTAGGACAGTTAGAGTTACTGCCGCCGTTTACC 17236 >seq3354 Length=110323 Score = 75.2 bits (82), Expect = 4e-11 Identities = 76/99 (77%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 369 GACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTG 428 ||||| ||| |||||| |||||| ||| ||| ||| ||| ||| ||| |||| Sbjct 37376 GACAGCGGGGCAGTCGTTACACCATTCGTGCAGGTCGCTACTTATGCGACAAGGAATTTC 37317 Query 429 GCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACC 467 ||||||||| || ||| | ||||||| |||||||||||| Sbjct 37316 GCTACCTTAGGACAGTTAGAGTTACTGCCGCCGTTTACC 37278 >seq1235 Length=88152 Score = 75.2 bits (82), Expect = 4e-11 Identities = 76/99 (77%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 369 GACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTG 428 ||||| ||| |||||| |||||| ||| ||| ||| ||| ||| ||| |||| Sbjct 64186 GACAGCGGGGCAGTCGTTACACCATTCGTGCAGGTCGCTACTTATGCGACAAGGAATTTC 64127 Query 429 GCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACC 467 ||||||||| || ||| | ||||||| |||||||||||| Sbjct 64126 GCTACCTTAGGACAGTTAGAGTTACTGCCGCCGTTTACC 64088 >seq403 Length=169495 Score = 75.2 bits (82), Expect = 4e-11 Identities = 76/99 (77%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 369 GACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTG 428 ||||| ||| |||||| |||||| ||| ||| ||| ||| ||| ||| |||| Sbjct 21093 GACAGCGGGGCAGTCGTTACACCATTCGTGCAGGTCGCTACTTATGCGACAAGGAATTTC 21034 Query 429 GCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACC 467 ||||||||| || ||| | ||||||| |||||||||||| Sbjct 21033 GCTACCTTAGGACAGTTAGAGTTACTGCCGCCGTTTACC 20995 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1633736250720