Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fraxinus_20excelsior_20[genbank_20GCA_5F900149125.1_202017-01-20] 89,515 sequences; 867,455,155 total letters Query= NC_016654.1 Length=39474 Score E Sequences producing significant alignments: (Bits) Value seq59516 167 6e-37 >seq59516 Length=1985 Score = 167 bits (184), Expect = 6e-37 Identities = 256/362 (71%), Gaps = 6/362 (2%) Strand=Plus/Minus Query 12184 ATCACCATCATCGGCAACCTGGTGGCGGACCCCGAGTTGCGGTTCACGCCGGCCGGTGCT 12243 |||||| |||||||||||||| | ||||| ||| | |||||| || | || || Sbjct 1278 ATCACCGTCATCGGCAACCTGACCGACGACCCGGAGCTCAAGTTCACTCCTTCGGGCGCC 1219 Query 12244 GCCGTCGCCAACTTCACCGTCGCGTCCACGCCGCGCACGTTCGACAAGCAGGCGAACGAG 12303 || || |||||||||||||||||||| ||||| || || |||| ||| | |||||| Sbjct 1218 GCAGTTGCCAACTTCACCGTCGCGTCGACGCCTCGAACCCTCGATCGTCAGACCAACGAG 1159 Query 12304 TGGAAGGACGGGGAGGCGCTGTTCATGCGCTGCCAGGTGTGGCGTGAGGCCGCCGAGAAC 12363 ||||||||||| ||||| |||||||| |||||| | ||||| || |||||||||| Sbjct 1158 TGGAAGGACGGCGAGGCTCTGTTCATTCGCTGCGCCGCCTGGCGCCAGCTCGCCGAGAAC 1099 Query 12364 GTCGCCGAGAGCTTGTCGCGGGGCTCGCGGGTCATCGTCACCGGCAAGCTCAAGTCCCGC 12423 ||||||||| || | ||| || |||||||||| ||| ||| | |||| Sbjct 1098 GTCGCCGAGTCGCTGCAGAAGGGTCAGCAGGTCATCGTCCAGGGCCCGCTGAGCATCCGC 1039 Query 12424 ACCTTCGAGACGCGTGAGG--GGGAGAAGCGG-ACCGTCATCGAACTGGAGGTCGACGAG 12480 | || ||| |||| ||| || |||| || | |||| || |||| ||||| Sbjct 1038 AACTACGA---GCGTCAGGACGGATCGCGCGGCACGAGCGTCGAGATGACGGTCAACGAG 982 Query 12481 ATCGGCCCCAGCCTCCGCTACGCCACCGCCACCGTGAACAAGGCCAACCGCGGCGGGGGA 12540 ||||| || || |||| ||| ||||||| || | | ||||||||| ||| || Sbjct 981 ATCGGTCCGTCGCTGCGCTTCGCGACCGCCAAGGTCACCCGCGCCAACCGCTCCGGCGGT 922 Query 12541 GG 12542 || Sbjct 921 GG 920 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 126061055685480