Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fraxinus_20excelsior_20[genbank_20GCA_5F900149125.1_202017-01-20] 89,515 sequences; 867,455,155 total letters Query= NC_031076.1 Length=38071 Score E Sequences producing significant alignments: (Bits) Value seq59516 163 7e-36 >seq59516 Length=1985 Score = 163 bits (180), Expect = 7e-36 Identities = 259/366 (71%), Gaps = 4/366 (1%) Strand=Plus/Minus Query 34846 CCAAATGAGCAG-CGAAACCCCTATCACCATCGTGGGCAACCTCACCGCCGACCCCGAAC 34904 ||| ||| |||| |||||| |||||| || | |||||||| |||| |||||| || | Sbjct 1300 CCACATG-GCAGGCGAAACGATCATCACCGTCATCGGCAACCTGACCGACGACCCGGAGC 1242 Query 34905 TGCGATATACCAATTCGGGCATTGCCGTCGCCAACTTCACCGTCGCATCCACACCACGCA 34964 | | || ||||||| || || ||||||||||||||||| || || || || | Sbjct 1241 TCAAGTTCACTCCTTCGGGCGCCGCAGTTGCCAACTTCACCGTCGCGTCGACGCCTCGAA 1182 Query 34965 CATTCGACCGGCAAGCCAACGAATGGAAGGACGGCGAGGCCCTGTTCCTGCCCTGCTCGG 35024 | |||| || || ||||||| ||||||||||||||||| |||||| | | |||| | | Sbjct 1181 CCCTCGATCGTCAGACCAACGAGTGGAAGGACGGCGAGGCTCTGTTCATTCGCTGCGCCG 1122 Query 35025 TGTGGCGTCAGCCGGCCGAGAACGTGGCCGAATCGCTGGCCAAGGGCATGCGTGTGATCG 35084 ||||| |||| ||||||||||| ||||| |||||| ||||| || || |||| Sbjct 1121 CCTGGCGCCAGCTCGCCGAGAACGTCGCCGAGTCGCTGCAGAAGGGTCAGCAGGTCATCG 1062 Query 35085 TCCAGGGACGTCTCCGGGCGCGCAGCTACGA-CGACCGCGACGGAAACCGTCGCACTGTG 35143 ||||||| | || | |||| |||||| || | | |||||| || |||| Sbjct 1061 TCCAGGGCCCGCTGAGCATCCGCAACTACGAGCGTCAG-GACGGATCGCGCGGCACGAGC 1003 Query 35144 ATCGGGATCGAAGTCGATGACGTGGGCCCGGCGTTGAAGTTTGCCACCGCTACCGTCACC 35203 ||| ||| ||| | || | || ||| || || || || ||||| | |||||| Sbjct 1002 GTCGAGATGACGGTCAACGAGATCGGTCCGTCGCTGCGCTTCGCGACCGCCAAGGTCACC 943 Query 35204 CGCGCC 35209 |||||| Sbjct 942 CGCGCC 937 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 121576228088190