Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Genlisea_20aurea_20[genbank_20GCA_5F000441915.1_202013-07-31] 10,684 sequences; 43,357,795 total letters Query= AAMG01000567.1 Length=197 Score E Sequences producing significant alignments: (Bits) Value seq56 93.3 4e-17 seq8 80.6 3e-13 seq1834 78.8 1e-12 >seq56 Length=38969 Score = 93.3 bits (102), Expect = 4e-17 Identities = 87/110 (79%), Gaps = 2/110 (2%) Strand=Plus/Plus Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGG 139 ||||||||| |||||| | ||| |||||||||||| || |||| ||| | || ||| | Sbjct 35621 TAAGGAACTCGGCAAAATAGCCCCGTAACTTCGGGAGAAGGGGTGCCTCCTCACAAA--G 35678 Query 140 GAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189 | || ||||| || ||| || ||| |||||||| |||||||||||| || Sbjct 35679 GGGGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCT 35728 >seq8 Length=50435 Score = 80.6 bits (88), Expect = 3e-13 Identities = 77/99 (78%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 25 AAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAGG 84 |||| |||||| || | || || ||||||| |||| ||||| ||| || | |||| Sbjct 913 AAACCGACACAGGTTCACAAGTAGAGTATACTAGGGCGTTTGAGAGAACCATGTCGAAGG 854 Query 85 AACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGT 123 |||| |||||| |||||| |||||||||||| || |||| Sbjct 853 AACTCGGCAAAATGACCCCGTAACTTCGGGAGAAGGGGT 815 >seq1834 Length=6762 Score = 78.8 bits (86), Expect = 1e-12 Identities = 104/142 (73%), Gaps = 2/142 (1%) Strand=Plus/Minus Query 44 GGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAGGAACTAGGCAAACTGACCCT 103 ||| || |||||||||| | ||||||||| | | |||||||||||||| |||||| Sbjct 3080 GGTAGAGTATACTAAGGTACATGAGTGAATAATACTGAAGGAACTAGGCAATTTGACCCC 3021 Query 104 GTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGGGAGGGCG-CAGAGAATAGGTCCAG 162 |||||||||||| || |||| | | || || || || | || | | ||| | Sbjct 3020 GTAACTTCGGGAGAAGGGGTGTCCA-CCTTAATCGGCTGGATGACACAAACCAGGAAGTG 2962 Query 163 GCAACTGTTTAACAAAAACACA 184 || ||||||||| ||||||||| Sbjct 2961 GCGACTGTTTAATAAAAACACA 2940 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531145020136