Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Genlisea_20aurea_20[genbank_20GCA_5F000441915.1_202013-07-31] 10,684 sequences; 43,357,795 total letters Query= AAMG01001138.1 Length=202 Score E Sequences producing significant alignments: (Bits) Value seq56 107 2e-21 seq8 107 2e-21 seq1835 95.1 1e-17 seq1834 93.3 5e-17 seq463 93.3 5e-17 >seq56 Length=38969 Score = 107 bits (118), Expect = 2e-21 Identities = 113/150 (75%), Gaps = 2/150 (1%) Strand=Plus/Minus Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84 |||||||| |||| || |||| || |||||||||| || | | ||||||| ||| Sbjct 36001 GGGTCTTTCTGTCCAGGTGCAGGTAGTCCGCATCTTCACAGACATGTCTATTTCACCGAG 35942 Query 85 CTCACGGTT-GAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCG 143 | | | | ||||||| ||| || ||||||| |||||||||||||||| Sbjct 35941 C-CTCTCTCCGAGACAGTGCCCAGATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCG 35883 Query 144 ACAAGGAATTTCGCTACCTTAGGACCGTTA 173 |||||||||||||||||||||||||||||| Sbjct 35882 ACAAGGAATTTCGCTACCTTAGGACCGTTA 35853 >seq8 Length=50435 Score = 107 bits (118), Expect = 2e-21 Identities = 112/151 (74%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82 ||||||||| |||| || |||| || |||||||||| || | | ||||||||| | Sbjct 478 CGGGGTCTTACCGTCTAGCCGTTGGTACTCCGCATCTTCACGGAGAATTCAATTTCACCG 537 Query 83 AGCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142 | || | ||||||| |||||||||||||||||||| ||||| | Sbjct 538 GGTCCATGTCGGAGACAGCGGGGCAGTCGTTACACCATTCGTGCAGGTCGCTACTTATGC 597 Query 143 GACAAGGAATTTCGCTACCTTAGGACCGTTA 173 |||||||||||||||||||||||||| |||| Sbjct 598 GACAAGGAATTTCGCTACCTTAGGACAGTTA 628 >seq1835 Length=24038 Score = 95.1 bits (104), Expect = 1e-17 Identities = 111/151 (74%), Gaps = 6/151 (4%) Strand=Plus/Plus Query 24 GGGGTCTTTTCGTCCC---ATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCAC 80 ||||||||| |||||| || | || ||| ||||| ||| | | | ||| ||||| Sbjct 19781 GGGGTCTTTCCGTCCCGCCATTCCATGT--TCG-CATCTACACAAACAATTCAACTTCAC 19837 Query 81 TGAGCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTAC 140 |||||| | | ||||||| ||||||| || |||| ||| |||||||| Sbjct 19838 TGAGCTAATACTGGAGACAGTGAAGCAGTCGTTACACCACTCATGCACGTCAGAACTTAC 19897 Query 141 CCGACAAGGAATTTCGCTACCTTAGGACCGT 171 | ||||||||||||||||||||||||||||| Sbjct 19898 CTGACAAGGAATTTCGCTACCTTAGGACCGT 19928 >seq1834 Length=6762 Score = 93.3 bits (102), Expect = 5e-17 Identities = 89/118 (75%), Gaps = 0/118 (0%) Strand=Plus/Plus Query 54 GCATCTTCACCGATACTACAATTTCACTGAGCTCACGGTTGAGACAGNNNNNNNNNNNNT 113 |||||| ||| | | | ||| ||||||||||| | | ||||||| | Sbjct 2671 GCATCTGCACAAACAATTCAAATTCACTGAGCTAATACTGGAGACAGTGAAGCAGTCGTT 2730 Query 114 ACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGT 171 |||||| || |||| ||| ||||||||| ||||||||||||||||||||||||||||| Sbjct 2731 ACACCACTCATGCACGTCAGAACTTACCTGACAAGGAATTTCGCTACCTTAGGACCGT 2788 >seq463 Length=39681 Score = 93.3 bits (102), Expect = 5e-17 Identities = 109/150 (73%), Gaps = 1/150 (1%) Strand=Plus/Minus Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84 |||||||| |||| ||| || || |||||| ||| || | | ||||||| |||| Sbjct 39140 GGGTCTTTCCGTCTAGCCGCTAATACTCTGCATCTGCACAGAGAATTCAATTTCGCTGAC 39081 Query 85 CTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCA-GGTCGGAACTTACCCG 143 | | | ||||||| |||||||||| |||| ||||| ||||||| || Sbjct 39080 TTAATACTGGAGACAGTGGGATAGTCGTTACACCATTCATGCAAGGTCGAAACTTACTCG 39021 Query 144 ACAAGGAATTTCGCTACCTTAGGACCGTTA 173 |||||||||||||||||||| | ||||||| Sbjct 39020 ACAAGGAATTTCGCTACCTTCGAACCGTTA 38991 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547143364116