Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Genlisea_20aurea_20[genbank_20GCA_5F000441915.1_202013-07-31] 10,684 sequences; 43,357,795 total letters Query= AAMG01001178.1 Length=367 Score E Sequences producing significant alignments: (Bits) Value seq56 226 6e-57 seq57 203 7e-50 seq463 111 3e-22 seq1835 77.0 7e-12 seq1834 77.0 7e-12 >seq56 Length=38969 Score = 226 bits (250), Expect = 6e-57 Identities = 239/309 (77%), Gaps = 18/309 (6%) Strand=Plus/Minus Query 29 CACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTC 88 |||||||||||| || |||||||||||||||||| || |||||||||||||||||| Sbjct 30352 CACGCGGCATTG-CTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTC 30294 Query 89 CCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTT 148 |||||||||||||| |||||||||||| |||||||| |||||||||||||| |||||| | Sbjct 30293 CCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCT 30234 Query 149 ACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATCCGACCTAGGCTCAT 208 || |||| |||||||||| ||| ||| ||||||||||||||||||| ||| | || | | Sbjct 30233 ACTGATCATCGCCTTGGTAAGCTATTGCCTCACCAACTAGCTAATCAGACGCAAGCCCCT 30174 Query 209 CTGATAGCGCAAGGCCCGAAGGTCCCCTGCTTTCTCCCGTAGGACGTATGCGGTATTAGC 268 | | || | || ||| | || || || || | || | ||||||||| Sbjct 30173 C--------CTCGGGCGGA--TTCCTCCTTTTGCT-CCTCAG--CCTACGGGGTATTAGC 30127 Query 269 GTCCGTTTCCGAACGTTATCCCCCACTACCA--GGCAGATTCCTAGGCATTACTCACCCG 326 |||||||| ||| | ||| || ||| ||||| ||| || || ||||||||||| Sbjct 30126 AGCCGTTTCCAGCTGTTGTTCCC--CTCCCAAGGGCAGGTTCTTACGCGTTACTCACCCG 30069 Query 327 TCCGCCGCT 335 |||||| || Sbjct 30068 TCCGCCACT 30060 >seq57 Length=38708 Score = 203 bits (224), Expect = 7e-50 Identities = 179/220 (81%), Gaps = 4/220 (2%) Strand=Plus/Plus Query 1 CTTTACAATCCGAA--GACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGC 58 |||||||| | | | | ||||||| ||| |||||| |||| ||||||||||||||||| Sbjct 38046 CTTTACAAGCGGCATTGCCCTTCTT-CACTCACGCGATATTG-CTGGATCAGGCTTTCGC 38103 Query 59 CCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCC 118 ||||||||||| |||||||||||||||| |||| |||||| || |||||||||||| || Sbjct 38104 CCATTGTCCAAGATTCCCCACTGCTGCCCCCCGCGGGAGTCCGGGCCGTGTCTCAGTCCC 38163 Query 119 AGTGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCT 178 |||||| |||||| ||| ||||||| || | ||| | | |||||||||| |||||| Sbjct 38164 AGTGTGGCTGATCGTCCGAAAAGACCAGCTAAGCATCATTGGCTTGGTGAGCTTTTACCT 38223 Query 179 CACCAACTAGCTAATCCGACCTAGGCTCATCTGATAGCGC 218 |||||||| ||||| | || ||||||||| | ||||| Sbjct 38224 TACCAACTACCTAATACTACGCAGGCTCATCAAACAGCGC 38263 >seq463 Length=39681 Score = 111 bits (122), Expect = 3e-22 Identities = 123/164 (75%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 38 TTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAG 97 || |||| |||| |||||||| |||||| ||| ||||| ||||||||||||| ||| Sbjct 986 TTCGCTGAATCAAGCTTTCGCTCATTGTTCAAGATTCCTCACTGCTGCCTCCTAATGGAA 927 Query 98 TCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTTACGGATCGT 157 ||| || | | ||||| ||| |||| || ||||||||||||||| || | ||| | Sbjct 926 CTTGGGCCTTTTTTCAGTCCCAATGTGGTTGTACATCCTCTCAGACCAACTAAGAATCAT 867 Query 158 CGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATCCGACCTA 201 || |||||| | |||| ||||||||| |||| || || || Sbjct 866 CGGCTTGGTACTCTATTAAAGCACCAACTACCTAAACCTACATA 823 >seq1835 Length=24038 Score = 77.0 bits (84), Expect = 7e-12 Identities = 114/159 (72%), Gaps = 2/159 (1%) Strand=Plus/Plus Query 36 CATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGG 95 ||||| | |||||| || || | ||||||||| ||||||||||||||||||||| ||| Sbjct 18443 CATTGCC-GGATCAAGCATTAACTCATTGTCCAGTATTCCCCACTGCTGCCTCCCTAAGG 18501 Query 96 AGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTTACGGATC 155 | | || || ||| |||| || |||| || ||| | ||| || || || | || Sbjct 18502 AATTCGGGCCTTGTTGCAGTCCCGATGTGGCTATACATTTTTTCAAACTAGCTAAAGGTC 18561 Query 156 GTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATC 194 | | ||||| | | | ||||| | ||||| | || ||| Sbjct 18562 ATTGGCTTGGGGCG-CTTTACCACCCCAACAACCTGATC 18599 >seq1834 Length=6762 Score = 77.0 bits (84), Expect = 7e-12 Identities = 113/159 (71%), Gaps = 1/159 (1%) Strand=Plus/Plus Query 36 CATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGG 95 ||||| | |||||| || || | ||||||||| ||||||||||||||||||||| || Sbjct 1317 CATTGCC-GGATCAAGCGTTAACTCATTGTCCAGTATTCCCCACTGCTGCCTCCCTAAGA 1375 Query 96 AGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTTACGGATC 155 | | || || ||| |||| || |||| || ||| | ||| || || || | || Sbjct 1376 AATTCGGGCCTTGTTACAGTCCCGATGTGGCTATACATTTTTTCAAACTAGCTAAAGGTC 1435 Query 156 GTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATC 194 | |||||| ||| || | | |||||||| || ||| Sbjct 1436 TCGGGCTTGGTAAGCTATCCCTTTACCAACTACCTGATC 1474 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1071885467520