Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glycine_20max_20[refseq_20GCF_5F000004515.4_202015-11-04] 1,191 sequences; 978,971,636 total letters Query= AAMG01000538.1 Length=248 Score E Sequences producing significant alignments: (Bits) Value seq1191 152 7e-35 seq1190 140 5e-31 seq19 104 3e-20 seq16 98.7 1e-18 seq1 95.1 2e-17 seq7 93.3 6e-17 seq9 91.5 2e-16 seq5 87.8 2e-15 seq4 87.8 2e-15 seq15 77.0 5e-12 >seq1191 Length=402558 Score = 152 bits (168), Expect = 7e-35 Identities = 181/243 (74%), Gaps = 12/243 (5%) Strand=Plus/Plus Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACC 65 ||||||| ||||||||||| ||||| | ||||||||| ||||| ||| ||| | || Sbjct 187562 CCTTCCAGCACCGGGCAGGTGTCAGACTCTATACATCGTGTTACCA-CTTAGCAGAGTCC 187620 Query 66 TGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACG 125 |||||||||| |||||||||||| ||| || | | ||| | | | |||| | Sbjct 187621 TGTGTTTTTAATAAACAGTCGCTACCCCCTGGTATGTGCCGCTTTCCTAA--TCAAAAGA 187678 Query 126 TCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCT 185 | || || | ||||||||||||||||||||||||| ||||||||||| ||||| Sbjct 187679 T--------AGGAGAG-CACCCCTTCTCCCGAAGTTACGGGGTCATTTTGCCGAGTTCCT 187729 Query 186 TAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACG 245 | || |||| | | | |||| |||||| |||||| || ||||||||||||||| | Sbjct 187730 TCGACATGGTTCTCTCAAGCGCCCTAGTATACTCTACTTGTTCACCTGTGTCGGTTTGGG 187789 Query 246 GTA 248 ||| Sbjct 187790 GTA 187792 >seq1190 Length=152218 Score = 140 bits (154), Expect = 5e-31 Identities = 180/245 (73%), Gaps = 24/245 (10%) Strand=Plus/Minus Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACC 65 |||||| ||| ||||||||||||| || |||||| | ||||| | ||| || |||| Sbjct 105388 CCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTAC-GACTTTGCGGAGACC 105330 Query 66 TGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACG 125 ||||||||| |||||||||||| || || |||||||| || Sbjct 105329 TGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCGACCCCCT------------- 105283 Query 126 TCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCT 185 | || || || ||||||||||||||||||||||||||| |||||||||| ||||| Sbjct 105282 TTGTG----AGGAG--GCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTCCT 105229 Query 186 TAACCACAGTTCACCCGAACGCCT-TAG-TATTCTCTACCTGACCACCTGTGTCGGTTTA 243 || | |||| | || ||||| ||| |||||||||||| |||||||||||||||| Sbjct 105228 TAGAGAGAGTTGTCTCG--CGCCTCTAGGTATTCTCTACCTACCCACCTGTGTCGGTTTC 105171 Query 244 CGGTA 248 |||| Sbjct 105170 GGGTA 105166 Score = 140 bits (154), Expect = 5e-31 Identities = 180/245 (73%), Gaps = 24/245 (10%) Strand=Plus/Plus Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACC 65 |||||| ||| ||||||||||||| || |||||| | ||||| | ||| || |||| Sbjct 130006 CCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTAC-GACTTTGCGGAGACC 130064 Query 66 TGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACG 125 ||||||||| |||||||||||| || || |||||||| || Sbjct 130065 TGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCGACCCCCT------------- 130111 Query 126 TCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCT 185 | || || || ||||||||||||||||||||||||||| |||||||||| ||||| Sbjct 130112 TTGTG----AGGAG--GCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTCCT 130165 Query 186 TAACCACAGTTCACCCGAACGCCT-TA-GTATTCTCTACCTGACCACCTGTGTCGGTTTA 243 || | |||| | || ||||| || ||||||||||||| |||||||||||||||| Sbjct 130166 TAGAGAGAGTTGTCTCG--CGCCTCTAGGTATTCTCTACCTACCCACCTGTGTCGGTTTC 130223 Query 244 CGGTA 248 |||| Sbjct 130224 GGGTA 130228 >seq19 Length=50746504 Score = 104 bits (114), Expect = 3e-20 Identities = 91/110 (83%), Gaps = 4/110 (4%) Strand=Plus/Plus Query 141 GGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTAACCACAGTTCACC 200 |||||||||||||||||||||||||| | ||||||||||||| |||| | ||| | Sbjct 34133565 GGCACCCCTTCTCCCGAAGTTACGGGACTATTTTGCCGAATTACTTAGAGAGAGTGGTCT 34133624 Query 201 CGAACGCCT-TA-GTATTCTCTACCTGACCACCTGTGTCGGTTTACGGTA 248 || ||||| || ||||||||||||| |||||||||||||||| |||| Sbjct 34133625 CG--CGCCTCTAGGTATTCTCTACCTATCCACCTGTGTCGGTTTCGGGTA 34133672 >seq16 Length=37887014 Score = 98.7 bits (108), Expect = 1e-18 Identities = 80/97 (82%), Gaps = 0/97 (0%) Strand=Plus/Plus Query 146 CCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTAACCACAGTTCACCCGAAC 205 ||||||||||||||||||||||| |||||||| | ||||||| | |||| | || | Sbjct 25033079 CCCTTCTCCCGAAGTTACGGGGCTATTTTGCCAAGTTCCTTACAGAGAGTTGTCTCGCGC 25033138 Query 206 GCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTT 242 ||| ||||||||||||| |||||||||||||||| Sbjct 25033139 CCCTAGGTATTCTCTACCTACCCACCTGTGTCGGTTT 25033175 >seq1 Length=56831395 Score = 95.1 bits (104), Expect = 2e-17 Identities = 82/102 (80%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 141 GGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTAACCACAGTTCACC 200 |||||||||| |||| |||||||||| | |||||||||| ||||||| | |||| | Sbjct 50113633 GGCACCCCTTTTCCCAAAGTTACGGGACTATTTTGCCGAGTTCCTTAGAGAGAGTTGTCT 50113574 Query 201 CGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTT 242 || | || |||||||||||||| |||||||||||| ||| Sbjct 50113573 CGCGCCTCTAAGTATTCTCTACCTATCCACCTGTGTCGATTT 50113532 >seq7 Length=44630203 Score = 93.3 bits (102), Expect = 6e-17 Identities = 84/106 (79%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 141 GGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTAACCACAGTTCACC 200 ||||||||||||| ||||||| ||||| ||||||| || ||||||| | | || | Sbjct 38586204 GGCACCCCTTCTCTTGAAGTTATGGGGCTATTTTGCAGAGTTCCTTAGAGAGAATTGTCT 38586263 Query 201 CGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACGG 246 || | ||| |||||||||||||| |||||||||| ||||| ||| Sbjct 38586264 CGTTCCCCTAAGTATTCTCTACCTACCCACCTGTGTTGGTTTTCGG 38586309 >seq9 Length=50189283 Score = 91.5 bits (100), Expect = 2e-16 Identities = 85/108 (79%), Gaps = 0/108 (0%) Strand=Plus/Minus Query 141 GGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTAACCACAGTTCACC 200 |||||| |||||| |||||||||||||| ||||||| || ||||||| | |||| | Sbjct 33307740 GGCACCTCTTCTCTCGAAGTTACGGGGCTATTTTGCTGAGTTCCTTAGAGAGAGTTGTCT 33307681 Query 201 CGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACGGTA 248 || | ||| ||||||| ||||| |||||||||| ||||| |||| Sbjct 33307680 CGTGCCCCTAGGTATTCTTTACCTACCCACCTGTGTTGGTTTCGGGTA 33307633 >seq5 Length=42234498 Score = 87.8 bits (96), Expect = 2e-15 Identities = 168/244 (69%), Gaps = 24/244 (10%) Strand=Plus/Plus Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACC 65 ||||| ||| ||||| || |||| || |||||| | ||||| | ||| | |||| Sbjct 14952953 CCTTCGGGCACTGGGCAAGCATCAGCCCCCATACATGGTCTTAC-GACTTTGAGAAGACC 14953011 Query 66 TGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACG 125 ||||||||| |||||||||||| ||| || || ||||| | Sbjct 14953012 TGTGTTTTTGGTAAACAGTCGCCCGGGCCTAGTCACTACGACCCCT-------------- 14953057 Query 126 TCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCT 185 | || || || |||||||||||||||||||||| |||| ||||| | | ||||| Sbjct 14953058 TTGTG----AGGAG--GCACCCCTTCTCCCGAAGTTACAGGGCTATTTT-TCAAGTTCCT 14953110 Query 186 TAACCACAGTTCACCCGAACGCCTTA-GTATTCTCTACCTGACCACCTGTGTCGGTTTAC 244 || | |||| | || || ||||| ||||||||||||| ||||||||| | ||| Sbjct 14953111 TAGAGAAAGTTGTCTCGCAC-CCTTAGGTATTCTCTACCTACCCACCTGTGCCAATTTCG 14953169 Query 245 GGTA 248 |||| Sbjct 14953170 GGTA 14953173 >seq4 Length=52388848 Score = 87.8 bits (96), Expect = 2e-15 Identities = 82/102 (80%), Gaps = 2/102 (2%) Strand=Plus/Minus Query 141 GGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTAACCACAGTTCACC 200 |||||||||||||| |||||||||||| | |||| ||| ||| ||| |||||| | Sbjct 37284727 GGCACCCCTTCTCCAAAAGTTACGGGGCTA-TTTGTCGAGTTCTTTAGAGACAGTTGTCT 37284669 Query 201 CGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTT 242 | || ||| ||||||||||||| ||||| ||||||||||| Sbjct 37284668 TGTACCCCTAGGTATTCTCTACCT-ACCACTTGTGTCGGTTT 37284628 >seq15 Length=51756343 Score = 77.0 bits (84), Expect = 5e-12 Identities = 84/109 (77%), Gaps = 2/109 (2%) Strand=Plus/Minus Query 141 GGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTAACCACAGTTCACC 200 |||||||||||||| ||||||||| | ||||| ||| || ||||| | |||| | Sbjct 439991 GGCACCCCTTCTCCTGAAGTTACGAAACTATTTTATCGAGTTTCTTAAAGAGAGTTGTCT 439932 Query 201 CGAACGCCTTAG-TATTCTCTACCTGACCACCTGTGTCGGTTTACGGTA 248 || | |||||| |||||| ||||| |||||||||||| ||| |||| Sbjct 439931 CGCGC-CCTTAGGTATTCTGTACCTACCCACCTGTGTCGATTTCAGGTA 439884 Score = 77.0 bits (84), Expect = 5e-12 Identities = 71/89 (80%), Gaps = 1/89 (1%) Strand=Plus/Minus Query 7 CTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACCT 66 |||||| ||||||||||| ||||| | || |||| | ||||| ||| ||| | ||| Sbjct 14099075 CTTCCAGCACCGGGCAGGTGTCAGACTCTAAACATTGTGTTACCA-CTTAGCAGAGTCCT 14099017 Query 67 GTGTTTTTAGTAAACAGTCGCTTCCCTCT 95 ||||||||| |||||||||||| ||| || Sbjct 14099016 GTGTTTTTAATAAACAGTCGCTACCCCCT 14098988 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694391988143