Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glycine_20max_20[refseq_20GCF_5F000004515.4_202015-11-04] 1,191 sequences; 978,971,636 total letters Query= AAMG01001291.1 Length=420 Score E Sequences producing significant alignments: (Bits) Value seq1190 223 9e-56 seq14 172 1e-40 seq9 143 7e-32 seq1191 102 2e-19 seq20 102 2e-19 seq16 91.5 4e-16 seq18 89.7 1e-15 >seq1190 Length=152218 Score = 223 bits (246), Expect = 9e-56 Identities = 307/414 (74%), Gaps = 13/414 (3%) Strand=Plus/Minus Query 9 CCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTT 68 ||||| |||| ||||| | || |||||| ||||||||||| |||||| ||||| | Sbjct 104309 CCACAACTCAT-CCGCTGA-TTCTTCAACATCAGTCGGTTCGGACCTCCACTTAGTT-TC 104253 Query 69 ACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGC 128 |||||| ||| || |||| ||| ||||||||| ||| | || |||||| || | || Sbjct 104252 ACCCAAGCTT-CATCCTGGTCAT-GGATAGATCACCCAGGTT-CGGGTCCATAAGC-AGT 104197 Query 129 GACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTA--TTCGGTTAAGCTT 186 ||| | ||||| |||||||||||| ||||||| |||| | ||| |||| | Sbjct 104196 GACAATT-GCCCTGTGAAGACTCGCTTT-CGCTACGGCTCCGGTGGTTTCCCTTAACCAA 104139 Query 187 TGCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAAAGT 246 ||||||| || |||||| | | |||| | ||| ||| |||| |||| | || Sbjct 104138 -GCCACTGCCTATGAGTCGCCGGCTCATTCTTCAACAGGCACGCGGTCAGAGTCCCGAGC 104080 Query 247 GGGCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGT 306 ||||||||||||| || |||||||||| | ||||||||||||||| | ||||| Sbjct 104079 CTCCTCCCACTGCTTGGGAGCTTACGGTTTCATGTTCTATTTCACTCCCCGATG-GGGGT 104021 Query 307 TCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCT 366 ||||||| || |||||||||||||||| |||||||||||||| ||| |||||||||||| Sbjct 104020 TCTTTTCACCCTTCCCTCACGGTACTACTTCACTATCGGTCACCCAGGAGTATTTAGCCT 103961 Query 367 TGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACTCG 420 || | | |||||| | ||||| || || | ||||| || | ||||||| Sbjct 103960 TGCAAGGTGGTCCTTGCTGATTCACACGGGATTCCACGTGCCCCATGCTACTCG 103907 Score = 223 bits (246), Expect = 9e-56 Identities = 307/414 (74%), Gaps = 13/414 (3%) Strand=Plus/Plus Query 9 CCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTT 68 ||||| |||| ||||| | || |||||| ||||||||||| |||||| ||||| | Sbjct 131085 CCACAACTCAT-CCGCTGA-TTCTTCAACATCAGTCGGTTCGGACCTCCACTTAGTT-TC 131141 Query 69 ACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGC 128 |||||| ||| || |||| ||| ||||||||| ||| | || |||||| || | || Sbjct 131142 ACCCAAGCTT-CATCCTGGTCAT-GGATAGATCACCCAGGTT-CGGGTCCATAAGC-AGT 131197 Query 129 GACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTA--TTCGGTTAAGCTT 186 ||| | ||||| |||||||||||| ||||||| |||| | ||| |||| | Sbjct 131198 GACAATT-GCCCTGTGAAGACTCGCTTT-CGCTACGGCTCCGGTGGTTTCCCTTAACCAA 131255 Query 187 TGCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAAAGT 246 ||||||| || |||||| | | |||| | ||| ||| |||| |||| | || Sbjct 131256 -GCCACTGCCTATGAGTCGCCGGCTCATTCTTCAACAGGCACGCGGTCAGAGTCCCGAGC 131314 Query 247 GGGCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGT 306 ||||||||||||| || |||||||||| | ||||||||||||||| | ||||| Sbjct 131315 CTCCTCCCACTGCTTGGGAGCTTACGGTTTCATGTTCTATTTCACTCCCCGATG-GGGGT 131373 Query 307 TCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCT 366 ||||||| || |||||||||||||||| |||||||||||||| ||| |||||||||||| Sbjct 131374 TCTTTTCACCCTTCCCTCACGGTACTACTTCACTATCGGTCACCCAGGAGTATTTAGCCT 131433 Query 367 TGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACTCG 420 || | | |||||| | ||||| || || | ||||| || | ||||||| Sbjct 131434 TGCAAGGTGGTCCTTGCTGATTCACACGGGATTCCACGTGCCCCATGCTACTCG 131487 >seq14 Length=49042192 Score = 172 bits (190), Expect = 1e-40 Identities = 250/340 (74%), Gaps = 11/340 (3%) Strand=Plus/Minus Query 42 GTCGGTTCGGTCCTCCAGTTAGTAGTTACCCAACCTTTCAACCTGCCCATAGGATAGATC 101 |||||||||| |||||| ||||| | |||||| ||| || |||| ||| ||||||||| Sbjct 37941633 GTCGGTTCGGACCTCCACTTAGTT-TCACCCAAGCTT-CATCCTGGTCAT-GGATAGATC 37941577 Query 102 GCCCGGTTTTCGGGTCTATTTCCCAGCGACTAGACGCCCTAGTAAGACTCGCTTTTCGCT 161 ||| | || ||||||||| | | ||| | ||||| |||| ||||||| |||| Sbjct 37941576 ACCCAGGTT-CGGGTCTATAAGCAAT-GACAATT-GCCCTGTGAAGATTCGCTTT-CGCT 37941521 Query 162 ACGCCTCCCCTA--TTCGGTTAAGCTTTGCCACTGAAAATAAGTCGCTGACCCATTATAC 219 || || | | ||| |||| | ||||| || |||||| | |||| | | Sbjct 37941520 ACAGCTTCGGTGGTTTCCCTTAACCAA-GCCACAACCTATGAGTCGCCAGCTCATTCTTC 37941462 Query 220 AAAAGGTACGCAGTCACCCAACAAAGTGGGCTCCCACTGCTTGTACGCATACGGTTTCAG 279 || ||| ||| |||| | || ||||||||||||| || |||||||||| Sbjct 37941461 AACAGGCACGTGGTCAGAGTCCCGAGCCTCCTCCCACTGCTTGGGAGCTTACGGTTTCAT 37941402 Query 280 GATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCAC 339 | ||||||||||||||| | |||||||||||| || |||||||||||||||| ||||| Sbjct 37941401 GTTCTATTTCACTCCCCGATG-GGGGTTCTTTTCACCCTTCCCTCACGGTACTACTTCAC 37941343 Query 340 TATCGGTCAGTCAGTAGTATTTAGCCTTGGAGGATGGTCC 379 ||||||||| ||| |||||||||||||| | | |||||| Sbjct 37941342 TATCGGTCACCCAGGAGTATTTAGCCTTGCAAGGTGGTCC 37941303 >seq9 Length=50189283 Score = 143 bits (158), Expect = 7e-32 Identities = 252/353 (71%), Gaps = 12/353 (3%) Strand=Plus/Minus Query 29 TTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTTACCCAACCTTTCAACCTGCC 88 || |||||| ||||| |||||| ||||| ||||| | |||||| ||| || | || Sbjct 33306760 TTCTTCAACATTAGTCAGTTCGGACCTCCTCTTAGTT-TCACCCAAGCTT-CATCTTGGT 33306703 Query 89 CATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGCGACTAGACGCCCTAGTAAGA 148 ||| ||| ||||| ||| | ||| ||||| || | || ||| | |||||| |||| Sbjct 33306702 CAT-GGACAGATCACCCAGGTTT-GGGTCCATAAGC-AGTGACAATT-GCCCTATGAAGA 33306647 Query 149 CTCGCTTTTCGCTACGCCTCCCCTA--TTCGGTTAAGCTTTGCCACTGAAAATAAGTCGC 206 |||||||| ||||||| |||| | ||| |||| | ||||||| || |||| | Sbjct 33306646 CTCGCTTT-CGCTACGGCTCCGGTGGTTTCCCTTAACCAA-GCCACTGCCTATGAGTCAC 33306589 Query 207 TGACCCATTATACAAAAGGTACGCAGTCACCCAACAAAGTGGGCTCCCACTGCTTGTACG 266 ||| |||| | ||| ||| | || ||| || |||||||||| || | Sbjct 33306588 CGACTCATTCTTCAACAGGCATGCGATCAGAGTCTCGAGCCTCCTCCCACTGCATGGGAG 33306529 Query 267 CATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCAC 326 | ||| |||||| | ||||||||| ||||| | ||| |||||||| || ||||||||| Sbjct 33306528 CTTACAGTTTCATGTTCTATTTCAATCCCCGATGAGGG-TTCTTTTCACCCTTCCCTCAC 33306470 Query 327 -GGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGAGGATGGTC 378 ||||||| ||||||||| || | ||| ||||||| ||||| | | ||||| Sbjct 33306469 GGGTACTACTTCACTATCAGTAACCCAGGAGTATTTTGCCTTCCAAGGTGGTC 33306417 >seq1191 Length=402558 Score = 102 bits (112), Expect = 2e-19 Identities = 102/130 (78%), Gaps = 3/130 (2%) Strand=Plus/Plus Query 255 ACTGCTTGTACGCATACGGTTTCAGGATCT--ATTTCACTCCCCTCTCCGGGGTTCTTTT 312 |||| |||| ||||| | | ||||| ||| ||| ||||||| | |||||||||| Sbjct 189047 ACTGATTGTTCGCATCGGATCTCAGGTTCTCTATTGCACTCCC-TAAATAGGGTTCTTTT 189105 Query 313 CGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGAGG 372 | |||||||||||||||||| || | |||||||||| | || | || |||| ||| |||| Sbjct 189106 CACCTTTCCCTCACGGTACTTGTACGCTATCGGTCATTGAGGAATACTTAGGCTTAGAGG 189165 Query 373 ATGGTCCCCC 382 ||||||||| Sbjct 189166 GTGGTCCCCC 189175 >seq20 Length=47900577 Score = 102 bits (112), Expect = 2e-19 Identities = 102/130 (78%), Gaps = 3/130 (2%) Strand=Plus/Minus Query 255 ACTGCTTGTACGCATACGGTTTCAGGATCT--ATTTCACTCCCCTCTCCGGGGTTCTTTT 312 |||| |||| ||||| | | ||||| ||| ||| ||||||| | |||||||||| Sbjct 16963055 ACTGATTGTTCGCATCGGATCTCAGGTTCTCTATTGCACTCCC-TAAATAGGGTTCTTTT 16962997 Query 313 CGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGAGG 372 | |||||||||||||||||| || | |||||||||| | || | || |||| ||| |||| Sbjct 16962996 CACCTTTCCCTCACGGTACTTGTACGCTATCGGTCATTGAGGAATACTTAGGCTTAGAGG 16962937 Query 373 ATGGTCCCCC 382 ||||||||| Sbjct 16962936 GTGGTCCCCC 16962927 >seq16 Length=37887014 Score = 91.5 bits (100), Expect = 4e-16 Identities = 88/112 (79%), Gaps = 2/112 (2%) Strand=Plus/Plus Query 250 CTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCT 309 ||| ||||||||| || |||||||||| | | || ||||||||| | |||||| | Sbjct 27495689 CTCTCACTGCTTGAGAGCTTACGGTTTCATGTTTTACTTCACTCCCTGAT--GGGGTTTT 27495746 Query 310 TTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTT 361 |||| || |||| ||||||||||| |||||||||||||| ||| | || || Sbjct 27495747 TTTCACCCTTCCTTCACGGTACTACTTCACTATCGGTCACCCAGGATTACTT 27495798 Score = 87.8 bits (96), Expect = 4e-15 Identities = 110/147 (75%), Gaps = 3/147 (2%) Strand=Plus/Plus Query 273 GTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCACGGTACT 332 |||||| | |||||||||||||| | |||||| ||||| || ||| |||| |||||| Sbjct 5383076 GTTTCATGTTCTATTTCACTCCCGA-TGTGGGGTT-TTTTCACCCTTCTCTCATGGTACT 5383133 Query 333 AGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGAGGATGGTCCCCCCATATTCAGA 392 | |||||||||||| || ||||||||| |||| | | || ||| | ||||| | Sbjct 5383134 AATTCACTATCGGTTGACTAGGAGTATTTAGTCTTGCAAGGTGATCCTTGCTAATTCACA 5383193 Query 393 CAAAGTTTCTCGTGCTCCGTCCTACTC 419 || | || | |||| ||| | |||||| Sbjct 5383194 CAGAATTCCACGTG-TCCCTACTACTC 5383219 >seq18 Length=58018742 Score = 89.7 bits (98), Expect = 1e-15 Identities = 91/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 302 GGGGTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTT 361 ||||||| |||| || |||||||||||||||| |||||||||||| | || ||||||| Sbjct 14608559 GGGGTTCCTTTCACCCTTCCCTCACGGTACTACTTCACTATCGGTTACCTAGGAGTATTT 14608618 Query 362 AGCCTTGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACTCG 420 ||||||| | | |||||| | ||||| || || | | ||| || | ||||||| Sbjct 14608619 AGCCTTGCAAGGTGGTCCTTGCTGATTCACACGGGATTCCACATGCACCATGCTACTCG 14608677 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1241585212544