Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glycine_20max_20[refseq_20GCF_5F000004515.4_202015-11-04] 1,191 sequences; 978,971,636 total letters Query= AAMG01001432.1 Length=344 Score E Sequences producing significant alignments: (Bits) Value seq1190 215 1e-53 seq13 161 2e-37 seq1191 136 8e-30 seq5 134 3e-29 seq7 84.2 4e-14 >seq1190 Length=152218 Score = 215 bits (238), Expect = 1e-53 Identities = 232/305 (76%), Gaps = 18/305 (6%) Strand=Plus/Minus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||| | ||| | ||||| |||| ||||||| | || || ||||||||||||||||||||| Sbjct 99973 GGCATTGCTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTCCCGTAG 99914 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120 ||||||||||||||||||||||||| |||||| | ||| |||||| | || ||||| ||| Sbjct 99913 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCTACTGAT 99854 Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCA 180 | ||| |||||| |||||| ||||||||||| |||||| | ||||||||| || | Sbjct 99853 CATCGCCTTGGTAAGCTATTGCCTCACCAACTAGCTAATCAGACGCGAGCCCCTCCTCGG 99794 Query 181 GC-GATAAATCTTTGGTCAAAGAATGATGCCATCCTCTGACATTATGCGGTATTAGCGTT 239 || ||| || || ||| ||||| | | || | ||||||||| Sbjct 99793 GCGGATTCCTCCTT------------TTGC--TCCTCAGCC--TACGGGGTATTAGCAGC 99750 Query 240 CGTTTCCAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTCCG 299 |||||||| ||| |||| ||| || || ||||| || ||| |||||||||||||||| Sbjct 99749 CGTTTCCAGCTGTTGTTCCCCTCCCAAGGGTAGGTT-CTTACGCGTTACTCACCCGTCCG 99691 Query 300 CCACT 304 ||||| Sbjct 99690 CCACT 99686 Score = 215 bits (238), Expect = 1e-53 Identities = 232/305 (76%), Gaps = 18/305 (6%) Strand=Plus/Plus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||| | ||| | ||||| |||| ||||||| | || || ||||||||||||||||||||| Sbjct 135421 GGCATTGCTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTCCCGTAG 135480 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120 ||||||||||||||||||||||||| |||||| | ||| |||||| | || ||||| ||| Sbjct 135481 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCTACTGAT 135540 Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCA 180 | ||| |||||| |||||| ||||||||||| |||||| | ||||||||| || | Sbjct 135541 CATCGCCTTGGTAAGCTATTGCCTCACCAACTAGCTAATCAGACGCGAGCCCCTCCTCGG 135600 Query 181 GC-GATAAATCTTTGGTCAAAGAATGATGCCATCCTCTGACATTATGCGGTATTAGCGTT 239 || ||| || || ||| ||||| | | || | ||||||||| Sbjct 135601 GCGGATTCCTCCTT------------TTGC--TCCTCAGCC--TACGGGGTATTAGCAGC 135644 Query 240 CGTTTCCAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTCCG 299 |||||||| ||| |||| ||| || || ||||| || ||| |||||||||||||||| Sbjct 135645 CGTTTCCAGCTGTTGTTCCCCTCCCAAGGGTAGGTT-CTTACGCGTTACTCACCCGTCCG 135703 Query 300 CCACT 304 ||||| Sbjct 135704 CCACT 135708 >seq13 Length=45874162 Score = 161 bits (178), Expect = 2e-37 Identities = 212/293 (72%), Gaps = 18/293 (6%) Strand=Plus/Plus Query 13 TCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCG 72 ||||| |||| ||||| | | || || ||||| || |||||||||| |||||||||||| Sbjct 44926592 TCAGGCTTTCGCCCATAGCGGAAAATTCCCCAGAGCGGCCTCCCGTAAGAGTCTGGGCCG 44926651 Query 73 TGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGGCTTGGT 132 ||||||||||||| ||||| | ||| ||||| | || ||||| ||| | | |||||| Sbjct 44926652 TGTCTCAGTCCCAGTGTGGTAGATCATCCTCTTGGACCAGCTACTAATCATTGCCTTGGT 44926711 Query 133 GGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCAGC-GATAAATCT 191 |||||| ||||||||||| |||||| | ||||||||| || | || ||| || Sbjct 44926712 AAGCTATTGCCTCACCAACTAGCTAATCAGACGCGAGCCCCTCCTCGGGCGGATTCCTCC 44926771 Query 192 TTGGTCAAAGAATGATGCCATCCTCTGACATTATGCGGTATTAGCGTTCGTTTCCAAACG 251 || || ||||| | | ||| ||||||||| ||||||||| | Sbjct 44926772 TTTTTC--------------TCCTCAGCC--TATAGGGTATTAGCAGTCGTTTCCAGTTG 44926815 Query 252 TTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTCCGCCACT 304 || |||| ||| || || ||||| || ||| |||||||| |||||| |||| Sbjct 44926816 TTGTTCCCCTCCCAAGGGTAGGTT-CTTACGCGTTACTCATCCGTCCATCACT 44926867 >seq1191 Length=402558 Score = 136 bits (150), Expect = 8e-30 Identities = 122/153 (80%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 7 GCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCT 66 |||| ||| || |||| |||||||| ||| || ||||||||||||| ||||| |||||| Sbjct 296963 GCTGGATCGGGCTTTCGCCCATTGTCCAAGATTCCCCACTGCTGCCCCCCGTGGGAGTCC 297022 Query 67 GGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGG 126 ||||||||||||||||||| |||||| | ||| || || || |||| ||| | || Sbjct 297023 GGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCGAAAAGACCAGCTAAGCATCATTGG 297082 Query 127 CTTGGTGGGCTATTATCTCACCAACTACCTAAT 159 |||||| || ||| || |||||||||||||| Sbjct 297083 CTTGGTCAGCCTTTACCTGACCAACTACCTAAT 297115 >seq5 Length=42234498 Score = 134 bits (148), Expect = 3e-29 Identities = 205/290 (71%), Gaps = 18/290 (6%) Strand=Plus/Plus Query 11 CATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCTGGGC 70 ||||||| |||| ||||||||| || || ||||| | |||||| | |||||||||||| Sbjct 14964619 CATCAGGCTTTCGCCCATTGTGAAAAATTCCCCATTACTGCCTTCTTTAGGAGTCTGGGT 14964678 Query 71 CGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGGCTTG 130 | |||||||||| | ||||| ||| |||||||| || ||| || | ||| | || Sbjct 14964679 CAGGTCTCAGTCCTAGTGTGGTTAATCATCCTCTCAGACCAACTATTGACCATCGCCATG 14964738 Query 131 GTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCAGC-GATAAAT 189 || | |||| ||||||||||| |||||| | | |||| || || | || ||| | Sbjct 14964739 GTATGTTATTGCCTCACCAACTAGCTAATCAGACACGAGTCCCTCCTCGGGCGGATTCCT 14964798 Query 190 CTTTGGTCAAAGAATGATGCCATCCTCTGACATTATGCGGTATTAGCGTTCGTTTCCAAA 249 | || ||| | ||| | | |||| ||||||||| |||||||| Sbjct 14964799 CCTT------------TTGC--TTCTCAGCC--TATGGGGTATTAGCAGCCGTTTCCAGC 14964842 Query 250 CGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTCCG 299 ||| |||| ||| || || ||||| || ||||||||||||||| |||| Sbjct 14964843 TGTTGTTCCCCTCCCAAGGGTAGGTT-CTTACGTGTTACTCACCCTTCCG 14964891 >seq7 Length=44630203 Score = 84.2 bits (92), Expect = 4e-14 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 13 TCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCG 72 || || |||| | ||||||| || || |||||| |||||||||| |||||||||||||| Sbjct 5260419 TCTGGCTTTCGCTCATTGTGGAAAATTCCCCACCGCTGCCTCCCATAGGAGTCTGGGCCT 5260478 Query 73 TGTCTCAGTCCCAA 86 |||||||||| ||| Sbjct 5260479 TGTCTCAGTCACAA 5260492 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 998388109056