Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glycine_20max_20[refseq_20GCF_5F000004515.4_202015-11-04] 1,191 sequences; 978,971,636 total letters Query= AAMG01001752.1 Length=400 Score E Sequences producing significant alignments: (Bits) Value seq1190 217 3e-54 seq9 185 2e-44 seq5 172 1e-40 seq3 168 2e-39 seq1191 167 5e-39 seq8 154 3e-35 seq17 109 1e-21 seq2 102 2e-19 >seq1190 Length=152218 Score = 217 bits (240), Expect = 3e-54 Identities = 301/410 (73%), Gaps = 20/410 (5%) Strand=Plus/Minus Query 1 CGACTACGCCTGTCGGCCTCGCCTTAGGACCCGACTCACCCAGGGCAGACAAACTTGACC 60 |||||||||| ||||||| |||||| || ||||||||| | ||| ||| | | Sbjct 104925 CGACTACGCCCTTCGGCCTGATCTTAGGCCCTGACTCACCCTCCGTGGACGAACCTTGCG 104866 Query 61 CTGGAACCCTTGGATAATCGGCGGACGGGATTCCCACC--CGTCACACGCTACTCATGCC 118 ||||||||||| | ||| | | |||||| |||| ||| || |||||| ||| Sbjct 104865 GAGGAACCCTTGGGTTTTCGAGGCATTGGATTCTCACCAACGTTTG-CGTTACTCAAGCC 104807 Query 119 TGCATTCTCACT--CGCATCAACTCCACCACACAGTCACCCGGCAGCTTCACCACTGACA 176 ||||||| || ||| || |||| ||| || | ||| |||| || || | Sbjct 104806 GACATTCTCGCTTCCGCTTCG--TCCAGCACTGC-TCGCGCGGGTCCTTC-CCTCTAAGG 104751 Query 177 CG--ACGCTCCCCTACCCAACCAC----ACAGGTTGCCACAGCTTCGGCGGATAACTTAA 230 || ||||||||||||| | | ||| | ||||||||||||| ||| |||| Sbjct 104750 CGGAACGCTCCCCTACCGATTCTTTTTTACA---TCCCACAGCTTCGGCAGATCGCTTA- 104695 Query 231 GCCCCGCTACATTATCGGCGCGGAATCACTTGACCAGTGAGCTATTACGCACTCTTTCAA 290 |||||| | ||| ||||||| | | || || |||||||||||||||||||||||||| Sbjct 104694 GCCCCGTT-CATCTTCGGCGCAAGAGCGCTCGATCAGTGAGCTATTACGCACTCTTTCAA 104636 Query 291 GGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTTTCCCACT 350 || |||||||||| | || |||||||||||||||| ||| | | || |||||| |||| Sbjct 104635 GGGTGGCTGCTTCTAGGCAAACCTCCTGGTTGTCTCTGCACCCCTACCTCCTTTATCACT 104576 Query 351 GAGTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCTCTCG 400 ||| || |||||||||||||||| ||||| ||||||||||||||||| Sbjct 104575 GAGCGGTCATTTAGGGGCCTTAGCTGGTGATCCGGGCTGTTTCCCTCTCG 104526 Score = 217 bits (240), Expect = 3e-54 Identities = 301/410 (73%), Gaps = 20/410 (5%) Strand=Plus/Plus Query 1 CGACTACGCCTGTCGGCCTCGCCTTAGGACCCGACTCACCCAGGGCAGACAAACTTGACC 60 |||||||||| ||||||| |||||| || ||||||||| | ||| ||| | | Sbjct 130469 CGACTACGCCCTTCGGCCTGATCTTAGGCCCTGACTCACCCTCCGTGGACGAACCTTGCG 130528 Query 61 CTGGAACCCTTGGATAATCGGCGGACGGGATTCCCACC--CGTCACACGCTACTCATGCC 118 ||||||||||| | ||| | | |||||| |||| ||| || |||||| ||| Sbjct 130529 GAGGAACCCTTGGGTTTTCGAGGCATTGGATTCTCACCAACGTTTG-CGTTACTCAAGCC 130587 Query 119 TGCATTCTCACT--CGCATCAACTCCACCACACAGTCACCCGGCAGCTTCACCACTGACA 176 ||||||| || ||| || |||| ||| || | ||| |||| || || | Sbjct 130588 GACATTCTCGCTTCCGCTTCG--TCCAGCACTGC-TCGCGCGGGTCCTTC-CCTCTAAGG 130643 Query 177 CG--ACGCTCCCCTACCCAACCAC----ACAGGTTGCCACAGCTTCGGCGGATAACTTAA 230 || ||||||||||||| | | ||| | ||||||||||||| ||| |||| Sbjct 130644 CGGAACGCTCCCCTACCGATTCTTTTTTACA---TCCCACAGCTTCGGCAGATCGCTTA- 130699 Query 231 GCCCCGCTACATTATCGGCGCGGAATCACTTGACCAGTGAGCTATTACGCACTCTTTCAA 290 |||||| | ||| ||||||| | | || || |||||||||||||||||||||||||| Sbjct 130700 GCCCCGTT-CATCTTCGGCGCAAGAGCGCTCGATCAGTGAGCTATTACGCACTCTTTCAA 130758 Query 291 GGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTTTCCCACT 350 || |||||||||| | || |||||||||||||||| ||| | | || |||||| |||| Sbjct 130759 GGGTGGCTGCTTCTAGGCAAACCTCCTGGTTGTCTCTGCACCCCTACCTCCTTTATCACT 130818 Query 351 GAGTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCTCTCG 400 ||| || |||||||||||||||| ||||| ||||||||||||||||| Sbjct 130819 GAGCGGTCATTTAGGGGCCTTAGCTGGTGATCCGGGCTGTTTCCCTCTCG 130868 >seq9 Length=50189283 Score = 185 bits (204), Expect = 2e-44 Identities = 159/194 (82%), Gaps = 2/194 (1%) Strand=Plus/Plus Query 207 CCACAGCTTCGGCGGATAACTTAAGCCCCGCTACATTATCGGCGCGGAATCACTTGACCA 266 |||||||||| || ||| |||| |||||| | ||| ||||||| | | || || || Sbjct 38824052 CCACAGCTTCAGCAGATCGCTTA-GCCCCGTT-CATCTTCGGCGCAAGAGCGCTCGATCA 38824109 Query 267 GTGAGCTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTA 326 |||||||||||||||||||||||||| |||||||||| | || |||||||||||||||| Sbjct 38824110 GTGAGCTATTACGCACTCTTTCAAGGGTGGCTGCTTCTAGGCAAACCTCCTGGTTGTCTC 38824169 Query 327 CGCAACTCCACATCCTTTCCCACTGAGTCACCACTTAGGGGCCTTAGCTGATGATCTGGG 386 ||| | | || |||||| ||||||| || |||||||||||||||| ||||| ||| Sbjct 38824170 TGCACCCCTACCTCCTTTATCACTGAGCGGTCATTTAGGGGCCTTAGCTGGTGATCCGGG 38824229 Query 387 CTGTTTCCCTCTCG 400 |||||||||||||| Sbjct 38824230 CTGTTTCCCTCTCG 38824243 Score = 168 bits (186), Expect = 2e-39 Identities = 154/192 (80%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 207 CCACAGCTTCGGCGGATAACTTAAGCCCCGCTACATTATCGGCGCGGAATCACTTGACCA 266 ||||||||| ||| ||| |||| |||||| | ||| ||||| | | | || || || Sbjct 33307185 CCACAGCTTTGGCAGATCGCTTA-GCCCCGTT-CATCTTCGGCACAAGAGCGCTCGATCA 33307128 Query 267 GTGAGCTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTA 326 ||||||||||| ||| |||||||||| |||||||||| | | |||||||||||||||| Sbjct 33307127 GTGAGCTATTATGCATTCTTTCAAGGGTGGCTGCTTCTAGGAAAACCTCCTGGTTGTCTC 33307068 Query 327 CGCAACTCCACATCCTTTCCCACTGAGTCACCACTTAGGGGCCTTAGCTGATGATCTGGG 386 ||| | | || |||||| ||||||| || |||||||||||||||| ||||||||| Sbjct 33307067 TGCACCCCTACCTCCTTTATCACTGAGCGGTCATTTAGGGGCCTTAGCTGGTGATCTGGG 33307008 Query 387 CTGTTTCCCTCT 398 |||||||||||| Sbjct 33307007 CTGTTTCCCTCT 33306996 >seq5 Length=42234498 Score = 172 bits (190), Expect = 1e-40 Identities = 156/194 (80%), Gaps = 2/194 (1%) Strand=Plus/Plus Query 207 CCACAGCTTCGGCGGATAACTTAAGCCCCGCTACATTATCGGCGCGGAATCACTTGACCA 266 ||||||||||||| ||| |||| ||| | | ||| |||| || | | || || || Sbjct 14959946 CCACAGCTTCGGCATATAGCTTA-GCCTTGTT-CATCTTCGGTGCAAGAGCGCTCGATCA 14960003 Query 267 GTGAGCTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTA 326 |||||||||||||||||||||||||| ||| |||||| | || |||||| |||||||||| Sbjct 14960004 GTGAGCTATTACGCACTCTTTCAAGGGTGGTTGCTTCTAGGCAAACCTCTTGGTTGTCTA 14960063 Query 327 CGCAACTCCACATCCTTTCCCACTGAGTCACCACTTAGGGGCCTTAGCTGATGATCTGGG 386 ||| | | || |||||| || |||| || |||||||||||||||| ||||||||| Sbjct 14960064 TGCACCCCTACCTCCTTTATCATTGAGCGGTCATTTAGGGGCCTTAGCTGGTGATCTGGG 14960123 Query 387 CTGTTTCCCTCTCG 400 |||||||||||||| Sbjct 14960124 CTGTTTCCCTCTCG 14960137 Score = 113 bits (124), Expect = 1e-22 Identities = 89/107 (83%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 294 TGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTTTCCCACTGAG 353 ||| |||||| | || |||||| ||||||||| ||| | | || |||||| ||||||| Sbjct 14960258 TGGTTGCTTCTAGGCAAACCTCTTGGTTGTCTCTGCACCCCTACCTCCTTTATCACTGAG 14960317 Query 354 TCACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCTCTCG 400 | || |||||||||||||||| ||||||||||||||||||||||| Sbjct 14960318 TGGTCATTTAGGGGCCTTAGCTGGTGATCTGGGCTGTTTCCCTCTCG 14960364 >seq3 Length=45779434 Score = 168 bits (186), Expect = 2e-39 Identities = 175/226 (77%), Gaps = 9/226 (4%) Strand=Plus/Minus Query 179 ACGCTCCCCTACCCAACCAC----ACAGGTTGCCACAGCTTCGGCGGATAACTTAAGCCC 234 ||||||||||||| | || ||| | ||||||||||||| || |||| |||| Sbjct 24143377 ACGCTCCCCTACCGATTCATTTTTACA---TCCCACAGCTTCGGCATATCGCTTA-GCCC 24143322 Query 235 CGCTACATTATCGGCGCGGAATCACTTGACCAGTGAGCTATTACGCACTCTTTCAAGGAT 294 | | ||| ||||||| | | || || ||||||||||||| |||||||||||||| | Sbjct 24143321 TGTT-CATCTTCGGCGCAAGAGCGCTCGATCAGTGAGCTATTATGCACTCTTTCAAGGGT 24143263 Query 295 GGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTTTCCCACTGAGT 354 || |||||| | || |||||||||||||||| ||| | | || |||||| ||||||| Sbjct 24143262 GGATGCTTCTAGGCAAACCTCCTGGTTGTCTCTGCACCCCTACCTCCTTTATCACTGAGC 24143203 Query 355 CACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCTCTCG 400 || ||||||||||||| || ||||| ||||||||||||||||| Sbjct 24143202 GGTCATTTAGGGGCCTTAGTTGGTGATCCGGGCTGTTTCCCTCTCG 24143157 >seq1191 Length=402558 Score = 167 bits (184), Expect = 5e-39 Identities = 153/192 (80%), Gaps = 6/192 (3%) Strand=Plus/Plus Query 212 GCTTCGGCGGATAACTTAAGCCCCGCTACATTATCGGCGC---GGAATCACTTGACCAGT 268 ||||||| | || |||| ||||| | |||||| |||| || ||| || ||||||| Sbjct 188393 GCTTCGGTGAATCACTTGAGCCCTGATACATTTTCGGTGCCATGGAG---CTAGACCAGT 188449 Query 269 GAGCTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACG 328 |||||||||||| |||| ||||||||||||||||||||| |||||||||||||| || Sbjct 188450 GAGCTATTACGCTTTCTTCAAAGGATGGCTGCTTCCAAGCCCACCTCCTGGTTGTCATCG 188509 Query 329 CAACTCCACATCCTTTCCCACTGAGTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCT 388 | ||| |||||| ||||| ||| | ||||||| ||||||| | |||||||||| Sbjct 188510 CTCGATCACTTCCTTTTCCACTAAGTGATTGCTTAGGGACCTTAGCGTACGATCTGGGCT 188569 Query 389 GTTTCCCTCTCG 400 |||||||||||| Sbjct 188570 GTTTCCCTCTCG 188581 >seq8 Length=47837022 Score = 154 bits (170), Expect = 3e-35 Identities = 152/194 (78%), Gaps = 2/194 (1%) Strand=Plus/Minus Query 207 CCACAGCTTCGGCGGATAACTTAAGCCCCGCTACATTATCGGCGCGGAATCACTTGACCA 266 ||||| ||||||| ||| |||| |||||| | ||| |||| | | | || || || Sbjct 34844772 CCACAACTTCGGCAGATCGCTTA-GCCCCGTT-CATCTTCGGTGTAAGAGCGCTCGATCA 34844715 Query 267 GTGAGCTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTA 326 |||||||||||||||||||||||||| |||||||||| | || || ||||||||||||| Sbjct 34844714 GTGAGCTATTACGCACTCTTTCAAGGGTGGCTGCTTCTAGGCAAATCTCCTGGTTGTCTC 34844655 Query 327 CGCAACTCCACATCCTTTCCCACTGAGTCACCACTTAGGGGCCTTAGCTGATGATCTGGG 386 ||| | | || || ||| ||||||| || |||||||||||||||| ||||| | | Sbjct 34844654 TGCACCCCTACCTCTTTTATCACTGAGCGGTCATTTAGGGGCCTTAGCTGGTGATCCGAG 34844595 Query 387 CTGTTTCCCTCTCG 400 |||||||||||| Sbjct 34844594 TCGTTTCCCTCTCG 34844581 >seq17 Length=41641078 Score = 109 bits (120), Expect = 1e-21 Identities = 92/113 (81%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 286 TTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTTTC 345 |||||||||||||||||||||||| |||||||||||||| || ||| |||||| Sbjct 23605343 TTCAAGGATGGCTGCTTCCAAGCCCACCTCCTGGTTGTCATCGTTCGATCACTTCCTTTT 23605284 Query 346 CCACTGAGTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCTCT 398 ||| | ||| | ||||||| ||||||| | |||||||||||||||||||| Sbjct 23605283 CCAGTAAGTGATTGCTTAGGGACCTTAGCGTACGATCTGGGCTGTTTCCCTCT 23605231 >seq2 Length=48577505 Score = 102 bits (112), Expect = 2e-19 Identities = 140/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 207 CCACAGCTTCGGCGGATAACTTAAGCCCCGCTACATTATCGGCGCGGAATCACTTGACCA 266 ||||| |||| || ||| ||||| | |||| | ||| ||||| | | |||| || || Sbjct 9238407 CCACAACTTCAGCAGATCACTTA-GTCCCGTT-CATCTTCGGCACAAGAGCACTGGATCA 9238464 Query 267 GTGAGCTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTA 326 ||| ||||||| |||||||||||||| |||| |||| | || |||||| |||| |||| Sbjct 9238465 GTGGGCTATTATGCACTCTTTCAAGGGTGGCCACTTCTAGGCAAACCTCTTGGTAGTCTC 9238524 Query 327 CGCAACTCCACATCCTTTCCCACTGAGTCACCACTTAGGGGCCTTAGCTGATGATCTGGG 386 ||| | | | ||||| || |||| || ||| || |||||| | ||||| Sbjct 9238525 TGCATCCCTGCCTCCTTCATCATTGAGCGGTCATTTAAGGACCTTAGTTAGTGATCCAAA 9238584 Query 387 CTGTTTCCCTCTC 399 |||||||||||| Sbjct 9238585 TTGTTTCCCTCTC 9238597 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1177585974784