Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glycine_20max_20[refseq_20GCF_5F000004515.4_202015-11-04] 1,191 sequences; 978,971,636 total letters Query= AAMG01001844.1 Length=290 Score E Sequences producing significant alignments: (Bits) Value seq1190 150 3e-34 seq1191 138 2e-30 seq1 93.3 7e-17 seq5 80.6 4e-13 >seq1190 Length=152218 Score = 150 bits (166), Expect = 3e-34 Identities = 200/278 (72%), Gaps = 0/278 (0%) Strand=Plus/Minus Query 6 GCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGTTCCTC 65 ||||||| ||||| |||||| | | |||||| || |||||| |||||||| | Sbjct 100319 GCTTTCGTCTCTCAGTGTCAGTGTCGGCCCAGCAGAGTGCTTTCGCCGTTGGTGTTCTTT 100260 Query 66 CGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCACTCAAG 125 | || |||||||||||||||||| ||| | |||||| |||| || | | |||| || Sbjct 100259 CCGATCTCTACGCATTTCACCGCTCCACCGGAAATTCCCTCTGCCCCTACCGTACTCCAG 100200 Query 126 AAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACTTGCCT 185 |||||| | || | ||||||||||| | ||| || | |||| Sbjct 100199 CTTGGTAGTTTCCACCGCCTGTCCAGGGTTGAGCCCTGGGATTTGACGGCGAACTTAAAA 100140 Query 186 TCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTA 245 || |||||| | |||||| |||||| | |||||||||||||||| ||| || ||| Sbjct 100139 AGCCACCTACAGACGCTTTACGCCCAATCATTCCGGATAACGCTTGCATCCTCTGTCTTA 100080 Query 246 CCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCC 283 |||||||||||||||| ||||||||| ||||||||| Sbjct 100079 CCGCGGCTGCTGGCACAGAGTTAGCCGATGCTTATTCC 100042 Score = 150 bits (166), Expect = 3e-34 Identities = 200/278 (72%), Gaps = 0/278 (0%) Strand=Plus/Plus Query 6 GCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGTTCCTC 65 ||||||| ||||| |||||| | | |||||| || |||||| |||||||| | Sbjct 135075 GCTTTCGTCTCTCAGTGTCAGTGTCGGCCCAGCAGAGTGCTTTCGCCGTTGGTGTTCTTT 135134 Query 66 CGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCACTCAAG 125 | || |||||||||||||||||| ||| | |||||| |||| || | | |||| || Sbjct 135135 CCGATCTCTACGCATTTCACCGCTCCACCGGAAATTCCCTCTGCCCCTACCGTACTCCAG 135194 Query 126 AAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACTTGCCT 185 |||||| | || | ||||||||||| | ||| || | |||| Sbjct 135195 CTTGGTAGTTTCCACCGCCTGTCCAGGGTTGAGCCCTGGGATTTGACGGCGAACTTAAAA 135254 Query 186 TCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTA 245 || |||||| | |||||| |||||| | |||||||||||||||| ||| || ||| Sbjct 135255 AGCCACCTACAGACGCTTTACGCCCAATCATTCCGGATAACGCTTGCATCCTCTGTCTTA 135314 Query 246 CCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCC 283 |||||||||||||||| ||||||||| ||||||||| Sbjct 135315 CCGCGGCTGCTGGCACAGAGTTAGCCGATGCTTATTCC 135352 >seq1191 Length=402558 Score = 138 bits (152), Expect = 2e-30 Identities = 204/286 (71%), Gaps = 5/286 (2%) Strand=Plus/Plus Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60 |||| |||||||| | ||||||| || |||| | | |||||||| ||| || Sbjct 296607 CCCATGCTTTCGCACTCCAGCGTCGGTAGGGACCCAGAGAGCTGCCTTCGCTTTTGGCGT 296666 Query 61 TCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCAC 120 |||| |||| |||| || |||||||| ||||||||| |||||| | ||||| ||| Sbjct 296667 TCCTTCGTAGATCTGCGGATTTCACCCCTACACACGAAATTCCACTCTCCTCTGTCTCAC 296726 Query 121 TCAAGAAAAACAGTTTCAAATGCAGGCTATGGGTTGA-GCCCATAGTTTTCACATCTGAC 179 ||||| || ||||| | ||| | | ||| | | | |||||| | || Sbjct 296727 TCAAGTGAATTGGTTTCGAGAGCATTCCACCAGTTTTTGGCGAC---TTTCACTTTCAAC 296783 Query 180 TTGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTAC 239 | | |||||||| ||||||||| |||| | | |||| | ||| |||||| || | Sbjct 296784 CCGATTCACCGCCTACGTGCCCTTTACGCCCAGTCATTCCGAAGAACACTTGCCCCCC-C 296842 Query 240 GTATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTC 285 || |||||||||||||||||||| ||||||||| ||||| |||||| Sbjct 296843 GTCTTACCGCGGCTGCTGGCACGGAGTTAGCCGGGGCTTCTTCCTC 296888 >seq1 Length=56831395 Score = 93.3 bits (102), Expect = 7e-17 Identities = 154/220 (70%), Gaps = 8/220 (4%) Strand=Plus/Minus Query 69 ATATCTACGCATTTCACCGCTACACACGG--AATTCCGATTGCCTCTCCAGCACTCAAGA 126 || |||||||||||| | || ||||| | |||||| |||| || | | |||| || Sbjct 4142170 ATCTCTACGCATTTCCCTACTCCACACCGGAAATTCCCTCTGCCCCTACCGTACTCCAGC 4142111 Query 127 AAAACAGTTTCAAATGCAGGCTATG---GGTTGAGCCCATAGTTTTCACATCTGACTTGC 183 |||||| | ||| |||| |||||||||| || ||| ||| | |||| Sbjct 4142110 TTGGTAGTTTCCACTGC---CTATCCAAGGTTGAGCCCTGAGATTTGACAACAAACTTAA 4142054 Query 184 CTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTAT 243 || | ||| | |||||| |||||| | || |||||| ||||| ||| || | Sbjct 4142053 AAAGCCACACACAGACGCTTTACGCCCAATCATTCTAGATAACACTTGCATCCTCTGTCT 4141994 Query 244 TACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCC 283 |||||||||||||||||| |||||| || ||||||||| Sbjct 4141993 TACCGCGGCTGCTGGCACAGAGTTAGTCGATGCTTATTCC 4141954 >seq5 Length=42234498 Score = 80.6 bits (88), Expect = 4e-13 Identities = 179/269 (67%), Gaps = 0/269 (0%) Strand=Plus/Plus Query 16 CTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGTTCCTCCGTATATCTA 75 ||||| |||||| | | |||||| | ||| || |||||||| | | || |||| Sbjct 14964273 CTCAGTGTCAGTATCGGCCCAGCAGAGTACTTTCACCGTTGGTGTTCTTTCCGATCTCTA 14964332 Query 76 CGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCACTCAAGAAAAACAGTT 135 |||||||||| || ||| | |||||| |||| || | | |||| || |||| Sbjct 14964333 TGCATTTCACCACTCCACCGGAAATTCCCTCTGCCCCTGCCGTACTCTAGCTTGGTAGTT 14964392 Query 136 TCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACTTGCCTTCCCGCCTAC 195 || | || | |||||||| | ||| | | | || || ||||| Sbjct 14964393 TCCACCGCCTGTCCAAAGTTGAGCCTTGGGATTTGATGACGAAATTAAAAAGCCACCTAC 14964452 Query 196 ACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACCGCGGCTGC 255 | ||||||||||||| | ||| |||| |||||| ||| || ||||| || |||| Sbjct 14964453 AAATGCTTTACACCCAATTATTCCAAATAATGCTTGCATCCTCTGTCTTACCACGACTGC 14964512 Query 256 TGGCACGTAGTTAGCCGTGGCTTATTCCT 284 |||||| ||||||| | |||||||||| Sbjct 14964513 TGGCACAAAGTTAGCTGATGCTTATTCCT 14964541 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 828790437461