Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glycine_20max_20[refseq_20GCF_5F000004515.4_202015-11-04] 1,191 sequences; 978,971,636 total letters Query= AAMG01001962.1 Length=275 Score E Sequences producing significant alignments: (Bits) Value seq1190 262 6e-68 seq9 197 2e-48 seq1191 196 8e-48 seq5 196 8e-48 seq11 161 2e-37 seq4 141 1e-31 seq6 134 2e-29 seq20 127 3e-27 seq8 96.9 5e-18 seq17 80.6 4e-13 seq3 75.2 2e-11 >seq1190 Length=152218 Score = 262 bits (290), Expect = 6e-68 Identities = 215/260 (83%), Gaps = 1/260 (0%) Strand=Plus/Minus Query 17 CTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGC-TATGCACTTGGCA 75 ||||||||| |||||| |||||| ||| |||| ||| |||||| | | | | |||| Sbjct 106305 CTTAGATGCTTTCAGCAGTTATCCGCTCCGCACTTGGCTACCCAGCGTTTACCGTGGGCA 106246 Query 76 GTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGACAGCTCCT 135 | |||||| |||||||||| |||| ||||||||||||||||||| ||| || |||| Sbjct 106245 CGATAACTGGCACACCAGAGGTGCGTCCTTCCCGGTCCTCTCGTACTAGGGAAAGGTCCT 106186 Query 136 CTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCGACGTTCTGAACCC 195 ||||| || |||||||| |||||| ||||||||||||||| ||||||||||||||| Sbjct 106185 CTCAATGCTCTAACGCCCACACCGGATATGGACCGAACTGTCTCACGACGTTCTGAACCC 106126 Query 196 AGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACTTCAGCCCCAG 255 ||||| ||| || ||||||||||||||||||||||||||||| || |||| ||||||||| Sbjct 106125 AGCTCACGTACCGCTTTAATGGGCGAACAGCCCAACCCTTGGAACATACTACAGCCCCAG 106066 Query 256 GATGAGACGAGCCGACATCG 275 | | || |||||||||||| Sbjct 106065 GTGGCGAAGAGCCGACATCG 106046 Score = 262 bits (290), Expect = 6e-68 Identities = 215/260 (83%), Gaps = 1/260 (0%) Strand=Plus/Plus Query 17 CTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGC-TATGCACTTGGCA 75 ||||||||| |||||| |||||| ||| |||| ||| |||||| | | | | |||| Sbjct 129089 CTTAGATGCTTTCAGCAGTTATCCGCTCCGCACTTGGCTACCCAGCGTTTACCGTGGGCA 129148 Query 76 GTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGACAGCTCCT 135 | |||||| |||||||||| |||| ||||||||||||||||||| ||| || |||| Sbjct 129149 CGATAACTGGCACACCAGAGGTGCGTCCTTCCCGGTCCTCTCGTACTAGGGAAAGGTCCT 129208 Query 136 CTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCGACGTTCTGAACCC 195 ||||| || |||||||| |||||| ||||||||||||||| ||||||||||||||| Sbjct 129209 CTCAATGCTCTAACGCCCACACCGGATATGGACCGAACTGTCTCACGACGTTCTGAACCC 129268 Query 196 AGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACTTCAGCCCCAG 255 ||||| ||| || ||||||||||||||||||||||||||||| || |||| ||||||||| Sbjct 129269 AGCTCACGTACCGCTTTAATGGGCGAACAGCCCAACCCTTGGAACATACTACAGCCCCAG 129328 Query 256 GATGAGACGAGCCGACATCG 275 | | || |||||||||||| Sbjct 129329 GTGGCGAAGAGCCGACATCG 129348 >seq9 Length=50189283 Score = 197 bits (218), Expect = 2e-48 Identities = 202/262 (77%), Gaps = 5/262 (2%) Strand=Plus/Minus Query 17 CTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGCTATGCACTTGGCAG 76 ||||||||| |||||| |||||| || | |||| ||| |||||| | | ||| | Sbjct 33308779 CTTAGATGCTTTCAGCAGTTATCCATTTCGTACTTGGCTACCCAGCGTTTATCGTGG--G 33308722 Query 77 TACAA---CTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGACAGCTC 133 ||||| |||| ||| |||||| |||| ||||| |||||| ||||| ||| || || Sbjct 33308721 TACAATAACTGGCACACTAGAGGTGCGTCCTTCCCGACCCTCTCATACTAGGGAAAGGTC 33308662 Query 134 CTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCGACGTTCTGAAC 193 ||||||| || | |||||| ||||| |||||||||| ||| |||||||| ||| Sbjct 33308661 CTCTCAATGCTCTAAAGCCCACATTGGATATGGACCGAACTATCTTATGACGTTCTAAAC 33308602 Query 194 CCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACTTCAGCCCC 253 ||||||| ||| || |||||||||||||||| || ||||||||| || |||| ||||| | Sbjct 33308601 CCAGCTCACGTACCGCTTTAATGGGCGAACAACCAAACCCTTGGAACATACTACAGCCTC 33308542 Query 254 AGGATGAGACGAGCCGACATCG 275 ||| | || |||||||||||| Sbjct 33308541 AGGTGGCGAAGAGCCGACATCG 33308520 >seq1191 Length=402558 Score = 196 bits (216), Expect = 8e-48 Identities = 194/251 (77%), Gaps = 4/251 (2%) Strand=Plus/Plus Query 29 CAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGCTATGCACTTGGCAGTACAACTGGTGC 88 |||| || | || | | |||||||| ||| || ||| |||||| ||||| ||| | Sbjct 186681 CAGCAGTTCTTCCATACCAACTTAGCAGCCCGGCGCTGCTATTGGCATAACAACCGGTAC 186740 Query 89 ACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGACAGCTCCTCTCAAATTTCCT- 147 |||| ||||| | ||| ||| |||||||||||||| || ||||||| || | ||| Sbjct 186741 ACCATAGGTTGGCCCAACCCAGTCCTCTCGTACTAGGGTTGGCTCCTCGCAGTTCTCCCT 186800 Query 148 ---ACGCCCACGACGGATAGGGACCGAACTGTCTCGCGACGTTCTGAACCCAGCTCGCGT 204 || || ||| |||||| ||||||||||||| ||||||||| |||||| ||| ||| Sbjct 186801 TTAACACCAACGGTAGATAGGAACCGAACTGTCTCACGACGTTCTAAACCCAACTCACGT 186860 Query 205 GCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACTTCAGCCCCAGGATGAGACG 264 || ||| ||| |||||||| || |||||||||||||| ||||| |||||||||| || | Sbjct 186861 ACCACTTGAATCGGCGAACAACCGAACCCTTGGGACCTTCTTCAACCCCAGGATGTGATG 186920 Query 265 AGCCGACATCG 275 || |||||||| Sbjct 186921 AGTCGACATCG 186931 >seq5 Length=42234498 Score = 196 bits (216), Expect = 8e-48 Identities = 200/260 (77%), Gaps = 1/260 (0%) Strand=Plus/Plus Query 17 CTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGCTATGCACTTGG-CA 75 ||||||||| |||||| ||||| | |||| ||| |||| | | | ||| || Sbjct 14952139 CTTAGATGCTTTCAGCAATTATCTGCTATGCACTTGGCTACCCAACGTTTATCGTGGGCA 14952198 Query 76 GTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGACAGCTCCT 135 | |||||| ||| |||||| | ||| |||| |||||||||||||| ||| | |||| Sbjct 14952199 CAATAACTGGCACACTAGAGGTGTATCCTTCCCAGTCCTCTCGTACTAGGGAAAATTCCT 14952258 Query 136 CTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCGACGTTCTGAACCC 195 ||||| || |||||||| ||||| ||||||||||||||| ||||||| ||||||| Sbjct 14952259 CTCAATGCTCTAACGCCCACATTGGATATGGACCGAACTGTCTCACGACGTTTTGAACCC 14952318 Query 196 AGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACTTCAGCCCCAG 255 ||||| ||| | |||||||||||||||| |||||||||||| || |||| |||||||| Sbjct 14952319 AGCTCACGTATCGCTTTAATGGGCGAACAACCCAACCCTTGGAACATACTATAGCCCCAG 14952378 Query 256 GATGAGACGAGCCGACATCG 275 | | | ||| |||||||| Sbjct 14952379 GTGGCAAAGAGACGACATCG 14952398 Score = 73.4 bits (80), Expect = 6e-11 Identities = 58/70 (83%), Gaps = 0/70 (0%) Strand=Plus/Minus Query 183 ACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCT 242 |||||||||||||||||| || || ||||||| | | ||||||||||||||||| | | Sbjct 41097366 ACGTTCTGAACCCAGCTCATGTACCGCTTTAATTGACAAACAGCCCAACCCTTGGAATAT 41097307 Query 243 ACTTCAGCCC 252 ||| ||| || Sbjct 41097306 ACTACAGTCC 41097297 >seq11 Length=34766867 Score = 161 bits (178), Expect = 2e-37 Identities = 162/209 (78%), Gaps = 1/209 (0%) Strand=Plus/Minus Query 17 CTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGCTATGCACTTGG-CA 75 ||||||||| |||||| |||||| ||| |||| ||| |||||| | | ||| || Sbjct 31306625 CTTAGATGCTTTCAGCAGTTATCCGCTCCGCACTTGGCTACCCAGCGTTTATCGTGGGCA 31306566 Query 76 GTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGACAGCTCCT 135 | |||||| |||||||||| |||| || | ||||||||||||| ||| || |||| Sbjct 31306565 CGATAACTGGCACACCAGAGGTGCGTCCTTCTCAATCCTCTCGTACTAGGGAAAGGTCCT 31306506 Query 136 CTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCGACGTTCTGAACCC 195 ||| | || ||| |||| |||||| ||||||||||||||| |||||||||||||| Sbjct 31306505 CTCGATGCTCTAACGTCCACACCGGATATGGACCGAACTGTCTCATGACGTTCTGAACCC 31306446 Query 196 AGCTCGCGTGCCTCTTTAATGGGCGAACA 224 ||||| | | || ||||||||| |||||| Sbjct 31306445 AGCTCACATACCGCTTTAATGGACGAACA 31306417 Score = 80.6 bits (88), Expect = 4e-13 Identities = 62/74 (84%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 202 CGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACTTCAGCCCCAGGATGAG 261 ||| || ||||||||| ||||||||||||||||||| || |||| |||||| ||| | | Sbjct 31306409 CGTACCGCTTTAATGGACGAACAGCCCAACCCTTGGAACATACTACAGCCCTAGGTGGCG 31306350 Query 262 ACGAGCCGACATCG 275 | |||| ||||||| Sbjct 31306349 AAGAGCTGACATCG 31306336 >seq4 Length=52388848 Score = 141 bits (156), Expect = 1e-31 Identities = 126/158 (80%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 80 AACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGACAGCTCCTCTCA 139 |||||| ||||| |||| ||||| ||||||||||||| ||||| ||| || |||||||| Sbjct 44152593 AACTGGCACACCAAAGGTGTGTCCTTCCCGGTCCTCTCATACTAGGGAAAGGTCCTCTCA 44152652 Query 140 AATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCGACGTTCTGAACCCAGCT 199 | || || ||||| ||||| ||||||||||||||| |||||||| |||||| || Sbjct 44152653 ATGCTCTAACTCCCACATAGGATATGGACCGAACTGTCTCATGACGTTCTTAACCCAACT 44152712 Query 200 CGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGG 237 | || | |||||||||| ||||| || ||| ||||| Sbjct 44152713 CATGTATCGCTTTAATGGGTGAACAACCAAACTCTTGG 44152750 >seq6 Length=51416163 Score = 134 bits (148), Expect = 2e-29 Identities = 153/204 (75%), Gaps = 1/204 (0%) Strand=Plus/Plus Query 72 GGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGACAGC 131 |||| | |||||| ||||| |||| || ||| ||||||||||||||| ||| | Sbjct 46328788 GGCACGATAACTGGCACACCAAAGGTGCATCTTTCCTGGTCCTCTCGTACTAGGGAAAAG 46328847 Query 132 TCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCGACGTTCTGA 191 ||||||||| || |||||||| || || ||| |||||||||| ||| ||||||| Sbjct 46328848 TCCTCTCAATGCTCTCACGCCCAC-ACTAGTATGGATTGAACTGTCTCACGATGTTCTGA 46328906 Query 192 ACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACTTCAGCC 251 | ||| ||| ||| | |||||||| |||| ||||||||||| || |||| || || Sbjct 46328907 ATCCAACTCACGTACTGCTTTAATGATTAAACAATCCAACCCTTGGAACATACTACATCC 46328966 Query 252 CCAGGATGAGACGAGCCGACATCG 275 ||||| | || |||| ||||||| Sbjct 46328967 CCAGGTGGCGAAGAGCTGACATCG 46328990 Score = 120 bits (132), Expect = 5e-25 Identities = 186/264 (70%), Gaps = 5/264 (2%) Strand=Plus/Plus Query 17 CTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGC-TATGCA----CTT 71 ||||||||| |||||| ||||| |||| |||| || |||| | | | | || Sbjct 46388818 CTTAGATGCTTTCAGCAATTATCTACTCCACACTTGGCAACCCAACGTTTACCGTGGCTG 46388877 Query 72 GGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGACAGC 131 |||| | |||||| |||| |||| |||| |||| | ||| |||||| ||| | Sbjct 46388878 GGCACGATAACTGGCACACCGAAGGTGAGTCCTTCCCAATATTCTTGTACTAGGGAAATG 46388937 Query 132 TCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCGACGTTCTGA 191 || ||| || || | |||||| | |||| ||||| | | |||| | || |||| | Sbjct 46388938 TCTTCTTAATGCTCTAATGCCCACACCAGATATGGACCCATTTATCTCACAACATTCTAA 46388997 Query 192 ACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACTTCAGCC 251 |||||||| || || |||||||||||||||| ||||||||||| || ||| || | Sbjct 46388998 ACCCAGCTTATGTACCGCTTTAATGGGCGAACAATCCAACCCTTGGAACATACAACACTC 46389057 Query 252 CCAGGATGAGACGAGCCGACATCG 275 | ||| | || |||| ||||||| Sbjct 46389058 CAAGGTGGCGAAGAGCTGACATCG 46389081 >seq20 Length=47900577 Score = 127 bits (140), Expect = 3e-27 Identities = 116/145 (80%), Gaps = 1/145 (1%) Strand=Plus/Minus Query 132 TCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCGACGTTCTGA 191 || |||||| || |||||||| |||||| ||||||||||||||| || |||||||| Sbjct 44502246 TCTTCTCAATGCTCTAACGCCCACACCGGATATGGACCGAACTGTCTCACGGCGTTCTGA 44502187 Query 192 ACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACTTC-AGC 250 | ||||||| ||| |||||||| ||||||| |||||||||||| || |||| | | | Sbjct 44502186 AACCAGCTCACGTATTGCTTTAATGAGCGAACAACCCAACCCTTGGAACATACTACAACC 44502127 Query 251 CCCAGGATGAGACGAGCCGACATCG 275 |||||| | || ||||||||||| Sbjct 44502126 CCCAGGTGGCGAAAAGCCGACATCG 44502102 >seq8 Length=47837022 Score = 96.9 bits (106), Expect = 5e-18 Identities = 106/140 (76%), Gaps = 1/140 (1%) Strand=Plus/Plus Query 101 TCCATCCCGGTCCTCTCGTACTAAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGG 160 ||| ||| ||| |||||||||||||| || |||| |||| || | ||| || || Sbjct 42492098 TCCCTCCTTGTCTTCTCGTACTAAGGAAAGGTCCTGTCAATGCTCTAATGCC-ACACTGG 42492156 Query 161 ATAGGGACCGAACTGTCTCGCGACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCG 220 ||| ||| | ||||||||| | ||||| |||||| ||| | | | || ||||| ||||| Sbjct 42492157 ATATGGATCAAACTGTCTCACAACGTTTTGAACCTAGCCCACATACCACTTTAGTGGGCA 42492216 Query 221 AACAGCCCAACCCTTGGGAC 240 |||| ||||||||||| || Sbjct 42492217 AACAATCCAACCCTTGGAAC 42492236 >seq17 Length=41641078 Score = 80.6 bits (88), Expect = 4e-13 Identities = 102/140 (73%), Gaps = 4/140 (3%) Strand=Plus/Minus Query 47 AACTTAGCTTCCCAGCTATGCACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATC 106 |||||||| ||| | | | |||||| ||||| ||| ||||| ||||| | ||| | Sbjct 23605985 AACTTAGCAGCCCGACACTACTATTGGCATAACAACCGGTACACCATAGGTTGGCCCAAC 23605926 Query 107 CCGGTCCTCTCGTACTAAGGACAGCTCCTCTCAAATTTCCT----ACGCCCACGACGGAT 162 || |||||||| ||||| || ||||||| || ||||| || || ||| ||| Sbjct 23605925 CCAGTCCTCTCATACTAGGGTTGGCTCCTCGCAGTTTTCCCTTTAACACCAACGGTAGAT 23605866 Query 163 AGGGACCGAACTGTCTCGCG 182 ||| ||||||||||||| || Sbjct 23605865 AGGAACCGAACTGTCTCACG 23605846 >seq3 Length=45779434 Score = 75.2 bits (82), Expect = 2e-11 Identities = 92/126 (73%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 150 GCCCACGACGGATAGGGACCGAACTGTCTCGCGACGTTCTGAACCCAGCTCGCGTGCCTC 209 |||||| || ||| ||| ||||||||| | | ||||||||||| || || | || | Sbjct 473765 GCCCACATCGAATATAAACCAAACTGTCTCACAATATTCTGAACCCAACTTGCATACCAC 473824 Query 210 TTTAATGGGCGAACAGCCCAACCCTTGGGACCTACTTCAGCCCCAGGATGAGACGAGCCG 269 |||| ||||| ||||| |||||||||| || ||| | ||||| | | | ||| | Sbjct 473825 TTTAGTGGGCAAACAGTCCAACCCTTGAAACAGACTATAACCCCAAGTAGCAAAGAGTTG 473884 Query 270 ACATCG 275 |||||| Sbjct 473885 ACATCG 473890 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 780790991276