Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glycine_20max_20[refseq_20GCF_5F000004515.4_202015-11-04] 1,191 sequences; 978,971,636 total letters Query= AAMG01002183.1 Length=408 Score E Sequences producing significant alignments: (Bits) Value seq1190 262 9e-68 seq15 224 2e-56 seq1191 214 4e-53 seq5 174 4e-41 seq17 165 2e-38 seq4 161 2e-37 seq1 140 8e-31 seq8 114 3e-23 seq7 100 7e-19 seq10 75.2 3e-11 >seq1190 Length=152218 Score = 262 bits (290), Expect = 9e-68 Identities = 298/397 (75%), Gaps = 2/397 (1%) Strand=Plus/Plus Query 13 AAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCG 72 |||| ||||||||| ||||||||||||||||||| || ||| || ||||||||||| Sbjct 100047 AAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAAGACAGAGGATGCAAGCGTTATCCG 100106 Query 73 GAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCTATGG 132 |||| | ||||||||||| || |||||||| || |||||| | || ||| | | || Sbjct 100107 GAATGATTGGGCGTAAAGCGTCTGTAGGTGGCTTTTTAAGTTCGCCGTCAAATCCCAGGG 100166 Query 133 CTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCAAGTGGAAT 192 |||||||| || || | |||||| | ||| |||| | | ||||||| ||||| Sbjct 100167 CTCAACCCTGGACAGGCGGTGGAAACTACCAAGCTGGAGTACGGTAGGGGCAGAGGGAAT 100226 Query 193 TCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGGCTT 252 | | ||| |||||||||||||||||| || | | |||||||| |||||| || | Sbjct 100227 TTCCGGTGGAGCGGTGAAATGCGTAGAGATCGGAAAGAACACCAACGGCGAAAGCACTCT 100286 Query 253 GCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACCC 312 ||||| | | |||||||||||| ||||||| ||||||| || ||||||||||||| Sbjct 100287 GCTGGGCCGACACTGACACTGAGAGACGAAAGCTAGGGGAGCGAATGGGATTAGATACCC 100346 Query 313 TGGTAGTCCACGCCGTAAACGATGAATACTAGGTGTCGGGGCGCAT-AAGTGCTCCGGTG 371 ||||||| ||||||||||||| |||||||| | | | ||| || | | | || Sbjct 100347 CAGTAGTCCTAGCCGTAAACGATGGATACTAGGCG-CTGTGCGTATCGACCCGTGCAATG 100405 Query 372 CCGCAGCAAACGCAATAAGTATTCCACCTGGGGAGTA 408 | | ||| ||||| ||||||| || ||||||||||| Sbjct 100406 CTGTAGCTAACGCGTTAAGTATCCCGCCTGGGGAGTA 100442 Score = 262 bits (290), Expect = 9e-68 Identities = 298/397 (75%), Gaps = 2/397 (1%) Strand=Plus/Minus Query 13 AAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCG 72 |||| ||||||||| ||||||||||||||||||| || ||| || ||||||||||| Sbjct 135347 AAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAAGACAGAGGATGCAAGCGTTATCCG 135288 Query 73 GAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCTATGG 132 |||| | ||||||||||| || |||||||| || |||||| | || ||| | | || Sbjct 135287 GAATGATTGGGCGTAAAGCGTCTGTAGGTGGCTTTTTAAGTTCGCCGTCAAATCCCAGGG 135228 Query 133 CTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCAAGTGGAAT 192 |||||||| || || | |||||| | ||| |||| | | ||||||| ||||| Sbjct 135227 CTCAACCCTGGACAGGCGGTGGAAACTACCAAGCTGGAGTACGGTAGGGGCAGAGGGAAT 135168 Query 193 TCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGGCTT 252 | | ||| |||||||||||||||||| || | | |||||||| |||||| || | Sbjct 135167 TTCCGGTGGAGCGGTGAAATGCGTAGAGATCGGAAAGAACACCAACGGCGAAAGCACTCT 135108 Query 253 GCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACCC 312 ||||| | | |||||||||||| ||||||| ||||||| || ||||||||||||| Sbjct 135107 GCTGGGCCGACACTGACACTGAGAGACGAAAGCTAGGGGAGCGAATGGGATTAGATACCC 135048 Query 313 TGGTAGTCCACGCCGTAAACGATGAATACTAGGTGTCGGGGCGCAT-AAGTGCTCCGGTG 371 ||||||| ||||||||||||| |||||||| | | | ||| || | | | || Sbjct 135047 CAGTAGTCCTAGCCGTAAACGATGGATACTAGGCG-CTGTGCGTATCGACCCGTGCAATG 134989 Query 372 CCGCAGCAAACGCAATAAGTATTCCACCTGGGGAGTA 408 | | ||| ||||| ||||||| || ||||||||||| Sbjct 134988 CTGTAGCTAACGCGTTAAGTATCCCGCCTGGGGAGTA 134952 >seq15 Length=51756343 Score = 224 bits (248), Expect = 2e-56 Identities = 295/405 (73%), Gaps = 3/405 (1%) Strand=Plus/Minus Query 5 TGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGC 64 || ||| |||| ||| ||||| ||||||||| |||||||| || ||| || ||| Sbjct 2155734 TGGGGAATAAGCATCGGTTAACTCTGTGCCAGCAAGCGCGGTAAGACAAAGGATGCAAGC 2155675 Query 65 GTTATCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAA 124 ||||||||||| | |||||||||||| | ||| ||| || |||||| | || ||| Sbjct 2155674 ATTATCCGGAATGATTGGGCGTAAAGG-TCTGTAAGTGACTTTTTAAGTTCGCCGTCAAA 2155616 Query 125 GGCTATGGCTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCA 184 | | |||||||||| || || | |||||| | ||| |||| | | ||||||| Sbjct 2155615 TCCCAAGGCTCAACCCTGGACAGGCGGTGGAAACTACCAAGCTGGAGTACGGTAGGGGCA 2155556 Query 185 AGTGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAA 244 |||||| | ||| |||||||||||| |||| ||| | |||||||| | |||| Sbjct 2155555 GAGGGAATTTCCGGTGGAGCGGTGAAATGTATAGAGATTGAAAAGAACACCAACGACGAA 2155496 Query 245 GGCGGCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATT 304 || |||||| | | ||||||||||| ||||||| ||||||| || ||||| Sbjct 2155495 AGCACTATGCTGGGCCGATACTGACACTGAAAGACGAAAGCTAGGGGAGCGAATGGGATT 2155436 Query 305 AGATACCCTGGTAGTCCACGCCGTAAACGATGAATACTAGGTGTCGGGGCGCAT-AAGTG 363 | |||||| ||||||| |||||||||||||||||||||| | ||| ||| || | Sbjct 2155435 ACATACCCAAGTAGTCCTAGCCGTAAACGATGAATACTAGGCG-CGGTGCGTATCGACCC 2155377 Query 364 CTCCGGTGCCGCAGCAAACGCAATAAGTATTCCACCTGGGGAGTA 408 | | ||| | ||| ||||| ||||||||||||||||| |||| Sbjct 2155376 GTGCAATGCTGTAGCTAACGCGTTAAGTATTCCACCTGGGAAGTA 2155332 >seq1191 Length=402558 Score = 214 bits (236), Expect = 4e-53 Identities = 254/340 (75%), Gaps = 11/340 (3%) Strand=Plus/Minus Query 2 ACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCT 61 ||| ||||| |||||||||||||||| |||||||||||||||||||| ||| |||||| Sbjct 296892 ACTCGAGGAAGAAGCCCCGGCTAACTCCGTGCCAGCAGCCGCGGTAAGACGG-GGGGGCA 296834 Query 62 AGCGTTATCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTG 121 || ||| | |||||| ||||||||||||||| |||||| ||| | || | ||| Sbjct 296833 AGTGTTCTTCGGAATGACTGGGCGTAAAGGGCACGTAGGCGGTGAATCGGGTTGAAAGTG 296774 Query 122 AAAGGCTATGGCTCAACCCCG-GGACTGCTTTTGAAAC---TGCAGGGCTAGAGTGCAGG 177 |||| | | | || | | ||| |||| | ||||| | || || ||||| Sbjct 296773 AAAGTC---GCCAAAAACTGGTGGAATGCTCTCGAAACCAATTCA---CTTGAGTGAGAC 296720 Query 178 AGGGGCAAGTGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAG 237 || || ||||||||| | |||||| |||||||| || |||| | | |||||| ||| Sbjct 296719 AGAGGAGAGTGGAATTTCGTGTGTAGGGGTGAAATCCGCAGATCTACGAAGGAACGCCAA 296660 Query 238 TGGCGAAGGCGGCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAA 297 |||||||| ||| |||| || ||| ||| | ||||||| |||||||| || Sbjct 296659 AAGCGAAGGCAGCTCTCTGGGTCCCTACCGACGCTGGAGTGCGAAAGCATGGGGAGCGAA 296600 Query 298 CAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGA 337 | ||||||||||||||||||||||| |||||||||||||| Sbjct 296599 CGGGATTAGATACCCTGGTAGTCCATGCCGTAAACGATGA 296560 >seq5 Length=42234498 Score = 174 bits (192), Expect = 4e-41 Identities = 282/403 (70%), Gaps = 2/403 (0%) Strand=Plus/Minus Query 7 AGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGT 66 |||| |||| | ||||||| |||||||||| || ||||| || ||| || ||| | Sbjct 14964541 AGGAATAAGCATCAGCTAACTTTGTGCCAGCAGTCGTGGTAAGACAGAGGATGCAAGCAT 14964482 Query 67 TATCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGG 126 ||| ||||| | |||| |||||| | |||||||| || |||| | | | ||| Sbjct 14964481 TATTTGGAATAATTGGGTGTAAAGCATTTGTAGGTGGCTTTTTAATTTCGTCATCAAATC 14964422 Query 127 CTATGGCTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCAAG 186 | | |||||||| || || | |||||| | |||||||| | | ||||||| Sbjct 14964421 CCAAGGCTCAACTTTGGACAGGCGGTGGAAACTACCAAGCTAGAGTACGGCAGGGGCAGA 14964362 Query 187 TGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGG 246 |||||| | ||| || |||||||||| |||| || | | |||||||| || ||| | Sbjct 14964361 GGGAATTTCCGGTGGAGTGGTGAAATGCATAGAGATCGGAAAGAACACCAACGGTGAAAG 14964302 Query 247 CGGCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAG 306 |||||| | | |||||||||||| || ||| ||||||| || ||||||| Sbjct 14964301 TACTCTGCTGGGCCGATACTGACACTGAGAAATGATAGCTAGGGGAGCGAATGGGATTAG 14964242 Query 307 ATACCCTGGTAGTCCACGCCGTAAACGATGAATACTAGGTGTCGGGGCGCAT-AAGTGCT 365 |||||| | | ||| || |||||| ||| ||||||||||| | ||| || | | Sbjct 14964241 ATACCCCAGCAATCCTAGCGGTAAACAATGGATACTAGGTGT-TGTGCGTATCGACCCGT 14964183 Query 366 CCGGTGCCGCAGCAAACGCAATAAGTATTCCACCTGGGGAGTA 408 | ||| | ||| ||| | ||||||| |||||||||||||| Sbjct 14964182 GCATTGCTGTAGCTAACACGTTAAGTATCCCACCTGGGGAGTA 14964140 >seq17 Length=41641078 Score = 165 bits (182), Expect = 2e-38 Identities = 211/287 (74%), Gaps = 4/287 (1%) Strand=Plus/Minus Query 59 GCTAGCGTTATCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAG 118 || ||| ||||| ||||| | ||||||||||| || |||||||| || |||||| | Sbjct 550937 GCAAGCATTATCTGGAATGATTGGGCGTAAAGCGTTTGTAGGTGGCTTTTTAAGTTTGTC 550878 Query 119 GTGAAAGGCTATGGCTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGA 178 || ||| | | |||||||||| ||| || | |||||| | ||| |||| | | Sbjct 550877 GTCAAATCCCAGGGCTCAACCCTGGGCAGGCGGTGGAAACTACCAAGCTGGAGTACGATA 550818 Query 179 GGGGCAAGTGGAA--TTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCA 236 |||||| | |||| ||||| || |||||||||||||||||| || | |||||||| Sbjct 550817 GGGGCA-GAGGAAATTTCCTC-TGAAGCGGTGAAATGCGTAGAGATCGAAAAGAACACCA 550760 Query 237 GTGGCGAAGGCGGCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAA 296 | |||| | ||||||| || | | ||||||| ||||||| ||||||||| Sbjct 550759 ACGACGAAAACACTTTGCTGGGTTGACATTAACACTGAAAGACGAAAGCTAGGGGAGCAA 550700 Query 297 ACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGAATACTA 343 | ||||||||||||| ||||||| | ||||||||||| |||||| Sbjct 550699 ATGGGATTAGATACCCCAGTAGTCCTAGTCGTAAACGATGGATACTA 550653 >seq4 Length=52388848 Score = 161 bits (178), Expect = 2e-37 Identities = 210/288 (73%), Gaps = 2/288 (1%) Strand=Plus/Minus Query 59 GCTAGCGTTATCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAG 118 || || |||||||||||| | ||||||||||| || ||||||| || |||||| | Sbjct 41598508 GCAAGTGTTATCCGGAATGATTGGGCGTAAAGCGTCTGTAGGTGACTTTTTAAGTTTGCT 41598449 Query 119 GTGAAAGGCTATGGCTCAACCCCGGGACTGCTTTTGAAA-CTGCAGGGCTAGAGTGCAGG 177 || ||| | | ||||||||| || || | | ||||| || | | | |||| | | Sbjct 41598448 GTCAAATCCCAGGGCTCAACCTTGG-ACAGGTGGTGAAAACTACCAAGTTGGAGTACGGT 41598390 Query 178 AGGGGCAAGTGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAG 237 ||||| | | |||| | ||| |||||||||||||||||| || | |||||||| Sbjct 41598389 AGGGGTAGAGGAAATTTCCGGTGGAGCGGTGAAATGCGTAGAGATCGAAAAGAACACCAA 41598330 Query 238 TGGCGAAGGCGGCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAA 297 ||||||| || || ||| | | ||||||| |||| | ||||| ||||| | || Sbjct 41598329 TGGCGAAAGCACTCTGTTGGGCCGACACTGACAATGAGAGACAAAAGCTAGGGGAACGAA 41598270 Query 298 CAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGAATACTAGG 345 ||||||||||||| ||||||| ||||||||||||| |||||||| Sbjct 41598269 TGGGATTAGATACCCCAGTAGTCCTAGCCGTAAACGATGGATACTAGG 41598222 >seq1 Length=56831395 Score = 140 bits (154), Expect = 8e-31 Identities = 230/331 (69%), Gaps = 8/331 (2%) Strand=Plus/Plus Query 13 AAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCG 72 |||| || |||||| ||||||||||||||||||| || ||| || || |||||| Sbjct 4141959 AAGCATCGACTAACTCTGTGCCAGCAGCCGCGGTAAGACAGAGGATGCAAGTGTTATCTA 4142018 Query 73 GAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCTATGG 132 |||| | ||||||||||| || || |||| || |||||| | || ||| | || Sbjct 4142019 GAATGATTGGGCGTAAAGCGTCTGTGTGTGGCTTTTTAAGTTTGTTGTCAAATCTCAGGG 4142078 Query 133 CTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCAAGTGGAAT 192 ||||||| || || | |||||| | ||| |||| | | ||||||| ||||| Sbjct 4142079 CTCAACCTTGGATAGGCAGTGGAAACTACCAAGCTGGAGTACGGTAGGGGCAGAGGGAAT 4142138 Query 193 TCCTAGTGT--AGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGGC 250 | | |||| || | |||||||||||| || ||||| || ||| || | Sbjct 4142139 TTCCGGTGTGGAGTAGGGAAATGCGTAGAGATCGAACAGAACATCAACGGCAAAAACACT 4142198 Query 251 TTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATAC 310 |||||| |||||||| ||| ||||||| ||||||| || ||||||||||| Sbjct 4142199 CTGCTGG------ACTGACACGGAGAGACGAAAGCTAGGGGAGCGAATGGGATTAGATAC 4142252 Query 311 CCTGGTAGTCCACGCCGTAAACGATGAATAC 341 || ||||| ||||||||| ||| |||| Sbjct 4142253 CCCATTAGTCTTAGCCGTAAACAATGGATAC 4142283 >seq8 Length=47837022 Score = 114 bits (126), Expect = 3e-23 Identities = 156/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 131 GGCTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCAAGTGGA 190 || |||||||||||| | || | || | ||| |||| || || || | ||| Sbjct 18716220 GGTTCAACCCCGGGATAGACGATGGACCTACCAAGCTGGAGTACAATAGAGGTAGAGGGA 18716161 Query 191 ATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGGC 250 ||| | |||| ||| ||||||| |||||| ||| | | |||||||| | | || || Sbjct 18716160 ATTTCCAGTGGAGCAGTGAAATACGTAGAGATTGGAAAGAACACCAACGACAAAAGCACT 18716101 Query 251 TTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATAC 310 |||| | | |||||||| |||| ||||||| ||||||| || ||||||||||| Sbjct 18716100 CTGCTAGGTCGAAACTGACATTGAGAGACGAAAGCTAGGGGAGCGAATGGGATTAGATAC 18716041 Query 311 CCTGGTAGTCCACGCCGTAAACGATGAATACTAGGTGT 348 || |||||| | |||||||||| ||||||||||| Sbjct 18716040 CCCAATAGTCCTAACTGTAAACGATGGATACTAGGTGT 18716003 >seq7 Length=44630203 Score = 100 bits (110), Expect = 7e-19 Identities = 97/125 (78%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 188 GGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGC 247 |||||| || ||| | |||||||||||||||| ||| | | |||||||| |||||| || Sbjct 7201352 GGAATTTCTGGTGGAACGGTGAAATGCGTAGAGATTGGAAAGAACACCAACGGCGAAAGC 7201293 Query 248 GGCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGA 307 ||||||| | | |||||||| ||| ||||||| ||||||| || ||||||| Sbjct 7201292 ACTTTGCTGGGCCGACACTGACACCGAGAGACGAAAGCTAGGGGAGCGAATGAGATTAGA 7201233 Query 308 TACCC 312 ||||| Sbjct 7201232 TACCC 7201228 >seq10 Length=51566898 Score = 75.2 bits (82), Expect = 3e-11 Identities = 73/94 (78%), Gaps = 0/94 (0%) Strand=Plus/Plus Query 252 TGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACC 311 |||||| | | |||||||||||| | ||||| |||||| || ||||||||||| Sbjct 38066963 TGCTGGGCCGACACTGACACTGAGAGACAAAAGCTAAGGGAGCGAATGAGATTAGATACC 38067022 Query 312 CTGGTAGTCCACGCCGTAAACGATGAATACTAGG 345 | ||||||| ||||||||||||| ||| |||| Sbjct 38067023 CCAGTAGTCCTAGCCGTAAACGATGGATATTAGG 38067056 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203185669888