Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glycine_20max_20[refseq_20GCF_5F000004515.4_202015-11-04] 1,191 sequences; 978,971,636 total letters Query= AAMG01002194.1 Length=319 Score E Sequences producing significant alignments: (Bits) Value seq1190 116 7e-24 seq7 107 4e-21 seq13 98.7 2e-18 seq18 89.7 9e-16 seq9 86.0 1e-14 seq1191 77.0 6e-12 seq20 77.0 6e-12 seq5 75.2 2e-11 >seq1190 Length=152218 Score = 116 bits (128), Expect = 7e-24 Identities = 177/246 (72%), Gaps = 12/246 (5%) Strand=Plus/Plus Query 8 ATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTGCG 67 ||||||||| ||| ||| | || ||| ||||| ||||||| ||| | ||| || Sbjct 103543 ATGGTGGATACCTAGGCACCCAGAGACGAGGAAGGGCGTAGTAAGCGACGAAATGCTTCG 103602 Query 68 GGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGA-ATGGGGAAACCCGGCCCTTTG 126 |||||| | ||| | | | |||||| |||| |||| || || |||| ||| Sbjct 103603 GGGAGTT-GAAAATAAGCGTAGATCCGGGGATTCCCGATATAGGTCAACC------TTTC 103655 Query 127 GGTCATTGCATGCTGAATACATAGGTATGCAA-AGCGAACGCGGCGAACTGAAACATCTA 185 | | ||| |||||||| || || | |||| || ||| || |||||||||||||| Sbjct 103656 GAAC--TGC-TGCTGAATCCACGGGCAGGCAAGAGACAACCTGGTGAACTGAAACATCTT 103712 Query 186 AGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAATGGGAT 245 |||||| ||||||||||| ||| | ||||||| ||||| |||||||||||||||| Sbjct 103713 AGTAGCCAGAGGAAAAGAAAGCAAAAGCGATTCCCGTAGTAGCGGCGAGCGAAATGGGAG 103772 Query 246 GAGCCT 251 ||||| Sbjct 103773 CAGCCT 103778 Score = 116 bits (128), Expect = 7e-24 Identities = 177/246 (72%), Gaps = 12/246 (5%) Strand=Plus/Minus Query 8 ATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTGCG 67 ||||||||| ||| ||| | || ||| ||||| ||||||| ||| | ||| || Sbjct 131851 ATGGTGGATACCTAGGCACCCAGAGACGAGGAAGGGCGTAGTAAGCGACGAAATGCTTCG 131792 Query 68 GGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGA-ATGGGGAAACCCGGCCCTTTG 126 |||||| | ||| | | | |||||| |||| |||| || || |||| ||| Sbjct 131791 GGGAGTT-GAAAATAAGCGTAGATCCGGGGATTCCCGATATAGGTCAACC------TTTC 131739 Query 127 GGTCATTGCATGCTGAATACATAGGTATGCAA-AGCGAACGCGGCGAACTGAAACATCTA 185 | | ||| |||||||| || || | |||| || ||| || |||||||||||||| Sbjct 131738 GAAC--TGC-TGCTGAATCCACGGGCAGGCAAGAGACAACCTGGTGAACTGAAACATCTT 131682 Query 186 AGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAATGGGAT 245 |||||| ||||||||||| ||| | ||||||| ||||| |||||||||||||||| Sbjct 131681 AGTAGCCAGAGGAAAAGAAAGCAAAAGCGATTCCCGTAGTAGCGGCGAGCGAAATGGGAG 131622 Query 246 GAGCCT 251 ||||| Sbjct 131621 CAGCCT 131616 >seq7 Length=44630203 Score = 107 bits (118), Expect = 4e-21 Identities = 94/116 (81%), Gaps = 1/116 (1%) Strand=Plus/Minus Query 137 TGCTGAATACATAGGTATGCAA-AGCGAACGCGGCGAACTGAAACATCTAAGTAGCTGCA 195 |||||||| || || | |||| || ||| ||| |||||||||||||| ||||||| | Sbjct 7201177 TGCTGAATCCACGGGCAGGCAAGAGACAACCCGGTGAACTGAAACATCTTAGTAGCTAGA 7201118 Query 196 GGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAATGGGATGAGCCT 251 |||||||||| ||| | ||||||| ||||| |||||||||||||||| ||||| Sbjct 7201117 GGAAAAGAAAGCAAAAGTGATTCCCGTAGTAGCGGCGAGCGAAATGGGAGCAGCCT 7201062 Score = 104 bits (114), Expect = 4e-20 Identities = 174/246 (71%), Gaps = 12/246 (5%) Strand=Plus/Minus Query 8 ATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTGCG 67 ||||||||| ||| ||| | || || ||||| ||||||| ||| | ||| | Sbjct 7201016 ATGGTGGATACCTAGGCACCCAGAGATGAGGAAGGGCGTAGTAAGCGACGAAATGCTTTG 7200957 Query 68 GGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGA-ATGGGGAAACCCGGCCCTTTG 126 |||||| | ||| | | | ||| || |||| |||| || || ||||| ||| Sbjct 7200956 GGGAGTT-GAAAATAAGCGTAGATTCGGGGATTCCCGATATAGGTAAACC------TTTC 7200904 Query 127 GGTCATTGCATGCTGAATACATAGGTATGCAA-AGCGAACGCGGCGAACTGAAACATCTA 185 | ||||| || ||||| | |||| |||| || || || |||||||||||||| Sbjct 7200903 GA--ATTGC-TGTTGAATCCTCGGGTAGGCAAGAGACAAACTGGTGAACTGAAACATCTT 7200847 Query 186 AGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAATGGGAT 245 |||||| ||||||||||| ||| | |||||| |||||||||||||||||||||| Sbjct 7200846 AGTAGCCAGAGGAAAAGAAAGCAAAAGCAATTCCCGTAGTAGTGGCGAGCGAAATGGGAG 7200787 Query 246 GAGCCT 251 ||||| Sbjct 7200786 TAGCCT 7200781 >seq13 Length=45874162 Score = 98.7 bits (108), Expect = 2e-18 Identities = 173/246 (70%), Gaps = 12/246 (5%) Strand=Plus/Minus Query 8 ATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTGCG 67 ||||||||| ||| || | || | | ||||| ||||||| ||| | ||| || Sbjct 16926583 ATGGTGGATACCTAGGTACCCAGAGACCAGGAAGGGCGTAGTAAGCGACGAAATGCTTCG 16926524 Query 68 GGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGA-ATGGGGAAACCCGGCCCTTTG 126 |||||| | ||| | | | |||||| |||| |||| || || |||| ||| Sbjct 16926523 GGGAGTT-GAAAATAAGCGTAGATCCGGGGATTCCCGATATAGGTCAACC------TTTC 16926471 Query 127 GGTCATTGCATGCTGAATACATAGGTATGCAA-AGCGAACGCGGCGAACTGAAACATCTA 185 | | ||| |||||||| || || | |||| || ||| || |||||||||||||| Sbjct 16926470 GAAC--TGC-TGCTGAATCCACGGGCAGGCAAGAGACAACCTGGTGAACTGAAACATCTT 16926414 Query 186 AGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAATGGGAT 245 |||||| ||||||||||| ||| | |||||| ||||| || ||||||||||||| Sbjct 16926413 AGTAGCCAGAGGAAAAGAAAGCAAAAGCGATTCCTGTAGTAGCGGTGAGCGAAATGGGAA 16926354 Query 246 GAGCCT 251 ||||| Sbjct 16926353 CAGCCT 16926348 >seq18 Length=58018742 Score = 89.7 bits (98), Expect = 9e-16 Identities = 70/84 (83%), Gaps = 0/84 (0%) Strand=Plus/Minus Query 168 GGCGAACTGAAACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAG 227 || |||||||||||||| ||||||| ||||||| ||| ||| | ||||||| ||||| Sbjct 14608889 GGTGAACTGAAACATCTTAGTAGCTAGAGGAAAATAAAACAAAAGCGATTCCCTTAGTAG 14608830 Query 228 TGGCGAGCGAAATGGGATGAGCCT 251 ||| ||||||||||||| ||||| Sbjct 14608829 TGGTGAGCGAAATGGGAGCAGCCT 14608806 >seq9 Length=50189283 Score = 86.0 bits (94), Expect = 1e-14 Identities = 84/107 (79%), Gaps = 1/107 (1%) Strand=Plus/Plus Query 139 CTGAATACATAGGTATGCAA-AGCGAACGCGGCGAACTGAAACATCTAAGTAGCTGCAGG 197 |||||| || || | |||| || ||| || ||||| |||||||| |||||| ||| Sbjct 33306134 CTGAATCTATGGGCAGGCAAGAGACAACATGGTGAACTAAAACATCTTGGTAGCTAGAGG 33306193 Query 198 AAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAATGGGA 244 |||||||| ||| | |||||||| ||||| ||||||| |||||||| Sbjct 33306194 AAAAGAAAGCAAAAGCGATTCCCATAGTAGCGGCGAGCAAAATGGGA 33306240 >seq1191 Length=402558 Score = 77.0 bits (84), Expect = 6e-12 Identities = 63/77 (82%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 169 GCGAACTGAAACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGT 228 |||||||||||||||| ||||||| ||||| |||||||||||||| || ||||| Sbjct 189544 GCGAACTGAAACATCTTAGTAGCTAAAGGAAGGGAAATCAACCGAGACCCCGTTAGTAGC 189485 Query 229 GGCGAGCGAAATGGGAT 245 ||||||||| | |||| Sbjct 189484 GGCGAGCGAGAGCGGAT 189468 >seq20 Length=47900577 Score = 77.0 bits (84), Expect = 6e-12 Identities = 63/77 (82%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 169 GCGAACTGAAACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGT 228 |||||||||||||||| ||||||| ||||| |||||||||||||| || ||||| Sbjct 16962558 GCGAACTGAAACATCTTAGTAGCTAAAGGAAGGGAAATCAACCGAGACCCCGTTAGTAGC 16962617 Query 229 GGCGAGCGAAATGGGAT 245 ||||||||| | |||| Sbjct 16962618 GGCGAGCGAGAGCGGAT 16962634 >seq5 Length=42234498 Score = 75.2 bits (82), Expect = 2e-11 Identities = 87/116 (75%), Gaps = 1/116 (1%) Strand=Plus/Minus Query 137 TGCTGAATACATAGGTATGCAA-AGCGAACGCGGCGAACTGAAACATCTAAGTAGCTGCA 195 |||||||| || || | |||| || ||| || ||| |||||||||| | |||| | Sbjct 14960924 TGCTGAATCCACGGGCAGGCAAGAGACAACTTGGTGAATTGAAACATCTTAATAGCCAGA 14960865 Query 196 GGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAATGGGATGAGCCT 251 |||||||||| ||| | ||||| ||||| ||||||||||||||| ||||| Sbjct 14960864 GGAAAAGAAAGCAAAAGCAATTCCTGTAGTAGCAGCGAGCGAAATGGGAGCAGCCT 14960809 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 918389061856