Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glycine_20max_20[refseq_20GCF_5F000004515.4_202015-11-04] 1,191 sequences; 978,971,636 total letters Query= AAMG01002207.1 Length=564 Score E Sequences producing significant alignments: (Bits) Value seq1190 192 2e-46 seq1191 185 3e-44 seq9 107 7e-21 seq3 107 7e-21 seq7 102 3e-19 seq5 89.7 2e-15 seq19 87.8 6e-15 seq11 77.0 1e-11 >seq1190 Length=152218 Score = 192 bits (212), Expect = 2e-46 Identities = 393/570 (69%), Gaps = 23/570 (4%) Strand=Plus/Minus Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCC 60 ||||| || |||| |||||||||||||||| ||| || ||||| | || || Sbjct 105911 TCGACGGGTGGGTCTTGCAGTCAAGCTCCCTTCTGCCTTTGCACTCGAGGGCCAATCTCC 105852 Query 61 AACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAG 120 | | | |||| |||||||| |||||||||||| |||||||||| | || |||||| Sbjct 105851 GTCTGGCCCGAGGAAACCTTTGCACGCCTCCGTTACCTTTTGGGAGGCCTAC-GCCCCAT 105793 Query 121 TTAAACTACCCACCAGGCACTGTCCC-CAACCC--AGATCATGGGCCAAGGTTAGATATC 177 ||||| | ||| | |||||||| | ||| || || ||| |||||||||| || Sbjct 105792 AGAAACTGTCTACCTGAGACTGTCCCTCGGCCCGTAGGTCCTGGCACAAGGTTAGAATTC 105733 Query 178 CACTACGGTCAGAGTGGTATTTCAACAACGACTC---CACAACCACTAGCGTGGCCGCAT 234 | | ||||||||||| ||| | | ||| | | ||| || | |||| | Sbjct 105732 TAGCTCTTCCAGAGTGGTATCTCACTGATGGCTCTGGCCCCCCCAGAAG-GAGGCCT--T 105676 Query 235 CATAGTCTCCCACCTATCCTACACA--AACCGCACCGAATGCCAATACCAAGCTATAGTG 292 | | | | ||||||| || | || || || | || |||||| ||| | | |||| Sbjct 105675 CTTTGCCCTCCACCTAAGCTGCGCAGGAAAAGCCC--AAAGCCAATCCCAGGAAACAGTG 105618 Query 293 AAGGTCCCG-GGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAA 351 ||| | | |||||||| |||| | || | | ||||||| || | | | Sbjct 105617 AAGCTTCATAGGGTCTTTCTGTCCAGGTGCAGGTAGTCCGCATCTTCACAGACATGTCTA 105558 Query 352 TTTCACCGGGCCTGTGGTTGAGACAGCAGGGGAG-TCGTTACGCCATTCGTGCAGGTCGG 410 |||||||| | || | ||||||| | || |||||||||| ||||||| |||||| Sbjct 105557 TTTCACCGAGTCTCTCTCCGAGACAGT-GCCCAGATCGTTACGCCTTTCGTGCGGGTCGG 105499 Query 411 AACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTAC 470 |||||||||||||||||||||||||||||||||| ||||||||||| |||||||| || Sbjct 105498 AACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTCAC 105439 Query 471 TGGGGCTTCAATTACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTT 530 |||||||| | || ||| || || | | |||| | ||| ||||| Sbjct 105438 CGGGGCTTC-GGTCGTCGGCTC-----CCCTGTCATCAGGTCACCAACTTCCTTGACCTT 105385 Query 531 CCAGCACCGGGCAGGCGTCAGTCCGTATAC 560 || |||| ||||||||||||| || |||| Sbjct 105384 CCGGCACTGGGCAGGCGTCAGCCCCCATAC 105355 Score = 192 bits (212), Expect = 2e-46 Identities = 393/570 (69%), Gaps = 23/570 (4%) Strand=Plus/Plus Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCC 60 ||||| || |||| |||||||||||||||| ||| || ||||| | || || Sbjct 129483 TCGACGGGTGGGTCTTGCAGTCAAGCTCCCTTCTGCCTTTGCACTCGAGGGCCAATCTCC 129542 Query 61 AACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAG 120 | | | |||| |||||||| |||||||||||| |||||||||| | || |||||| Sbjct 129543 GTCTGGCCCGAGGAAACCTTTGCACGCCTCCGTTACCTTTTGGGAGGCCTAC-GCCCCAT 129601 Query 121 TTAAACTACCCACCAGGCACTGTCCC-CAACCC--AGATCATGGGCCAAGGTTAGATATC 177 ||||| | ||| | |||||||| | ||| || || ||| |||||||||| || Sbjct 129602 AGAAACTGTCTACCTGAGACTGTCCCTCGGCCCGTAGGTCCTGGCACAAGGTTAGAATTC 129661 Query 178 CACTACGGTCAGAGTGGTATTTCAACAACGACTC---CACAACCACTAGCGTGGCCGCAT 234 | | ||||||||||| ||| | | ||| | | ||| || | |||| | Sbjct 129662 TAGCTCTTCCAGAGTGGTATCTCACTGATGGCTCTGGCCCCCCCAGAAG-GAGGCCT--T 129718 Query 235 CATAGTCTCCCACCTATCCTACACA--AACCGCACCGAATGCCAATACCAAGCTATAGTG 292 | | | | ||||||| || | || || || | || |||||| ||| | | |||| Sbjct 129719 CTTTGCCCTCCACCTAAGCTGCGCAGGAAAAGCCC--AAAGCCAATCCCAGGAAACAGTG 129776 Query 293 AAGGTCCCG-GGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAA 351 ||| | | |||||||| |||| | || | | ||||||| || | | | Sbjct 129777 AAGCTTCATAGGGTCTTTCTGTCCAGGTGCAGGTAGTCCGCATCTTCACAGACATGTCTA 129836 Query 352 TTTCACCGGGCCTGTGGTTGAGACAGCAGGGGAG-TCGTTACGCCATTCGTGCAGGTCGG 410 |||||||| | || | ||||||| | || |||||||||| ||||||| |||||| Sbjct 129837 TTTCACCGAGTCTCTCTCCGAGACAGT-GCCCAGATCGTTACGCCTTTCGTGCGGGTCGG 129895 Query 411 AACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTAC 470 |||||||||||||||||||||||||||||||||| ||||||||||| |||||||| || Sbjct 129896 AACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTCAC 129955 Query 471 TGGGGCTTCAATTACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTT 530 |||||||| | || ||| || || | | |||| | ||| ||||| Sbjct 129956 CGGGGCTTC-GGTCGTCGGCTC-----CCCTGTCATCAGGTCACCAACTTCCTTGACCTT 130009 Query 531 CCAGCACCGGGCAGGCGTCAGTCCGTATAC 560 || |||| ||||||||||||| || |||| Sbjct 130010 CCGGCACTGGGCAGGCGTCAGCCCCCATAC 130039 >seq1191 Length=402558 Score = 185 bits (204), Expect = 3e-44 Identities = 291/414 (70%), Gaps = 22/414 (5%) Strand=Plus/Plus Query 76 ACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAGTTAAACTACCCACCA 135 ||||| | | |||||||||| ||| ||||| || ||||||||| ||||||||||||| Sbjct 187137 ACCTTCGCACACCTCCGTTACTCTTTAGGAGG-CATCCGCCCCAGATAAACTACCCACCT 187195 Query 136 GGCACTGTCCC---CAACCCAGATCATGGG--CCAAGGTTAGATATCCACTACGGTCAGA 190 ||| |||||| | ||| || | || | |||||| |||| | ||| Sbjct 187196 CGCAGTGTCCCGCCCCCCCCGAATTTTCGGTGCGGCGGTTAGGCATCCTTAGACGAAAGA 187255 Query 191 GTGGTATTTCAACAACGACTCCACAACCACTAGCGTGGCCGCATCATAGTCTCCCACCTA 250 ||||| ||||| | | ||| | | |||| |||||||||| Sbjct 187256 GTGGTCTTTCAGGATTGGT--------------CGTT-CTGTGTCATCACCTCCCACCTA 187300 Query 251 TCCTACACAAACCGCACCGAATGCCAATACCAAGCTATAGTGAAGGTCC-CGGGGTCTTT 309 ||||||||| | | || || | | |||||||||| ||||| | ||||||||| Sbjct 187301 TCCTACACATTCGATCAAGGTTGTCACTGCGAAGCTATAGTTAAGGTGCACGGGGTCTTA 187360 Query 310 TCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTTCACCGGGCCTGTGGT 369 |||| |||| | | ||||||| || | | ||||||||||||| | || Sbjct 187361 CCGTCTAGCCGTTGGTACTCCGCATCTTCACGGAGAATTCAATTTCACCGGGTCCATGTC 187420 Query 370 TGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAAT 429 |||||||| ||| ||||||||| |||||||||||||||| ||||| ||||||||||| Sbjct 187421 GGAGACAGCGGGGCAGTCGTTACACCATTCGTGCAGGTCGCTACTTATGCGACAAGGAAT 187480 Query 430 TTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCTTCAATT 483 ||||||||||||||| |||| |||||| ||||||||||| |||||||| ||| Sbjct 187481 TTCGCTACCTTAGGACAGTTAGAGTTACTGCCGCCGTTTACCGGGGCTTCCATT 187534 >seq9 Length=50189283 Score = 107 bits (118), Expect = 7e-21 Identities = 327/494 (66%), Gaps = 20/494 (4%) Strand=Plus/Minus Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTC-ACCACCTGATTGC 59 ||||| || |||| ||| |||||||||||| ||| || ||||| | || | | | Sbjct 33308385 TCGACGGGTGGGTCTTGCAATCAAGCTCCCTTCTGCCTTTGCACTCGAGGGCCAAACT-C 33308327 Query 60 CAACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCA 119 | | | |||||| |||||||| |||||||||||| ||| |||||| || |||||| Sbjct 33308326 CGTCTGGCCTGAGGAAACCTTTGCACGCCTCCGTTACCTTTAGGGAGGCTTAC-GCCCCA 33308268 Query 120 GTTAAACTACCCACCAGGCACTGTCCC-CAACCC--AGATCATGGGCCAAGGTTAGATAT 176 |||||| | ||| | ||| |||| | | | || || ||| |||||||||| | Sbjct 33308267 TAGAAACTATCTACCTGAGACTATCCCTCGGCTCGTAGGTCCTGGAACAAGGTTAGAATT 33308208 Query 177 CCACTACGGTCAGAGTGGTATTTCAACAACGACTC-------CACAACCACTAGCGTGGC 229 | | | |||||||||| ||| || | || | | || ||| | Sbjct 33308207 CTAGCTCTTCTAGAGTGGTATCTCACTAAGGGTTCGCCCCCCCCCCCCCCCTAAGAAAGA 33308148 Query 230 CGCAT-CATAGTCTCCCACCTATCCTACACA--AACCGCACCGAATGCCAATACCAAGCT 286 || | | | | | ||||||| |||| || || || | || |||||| ||| | Sbjct 33308147 AGCCTTCTTTGCCCTCCACCTAAGCTACGCAGGAAAAGCCC--AAAGCCAATCCCAGGAA 33308090 Query 287 ATAGTGAAGGTCCCGG-GGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTA 345 ||||||||| | | ||||||| |||| || | | ||||||| || | Sbjct 33308089 ATAGTGAAGCTTCATATGGTCTTTCTGTCCAAGTGCAGGTAGTCCGCATCTTCACAAACA 33308030 Query 346 CTGCAATTTCACCGGGCCTGTGGTTGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAG 405 | ||||||||| | || | ||| ||| | || ||| ||| ||| ||| | Sbjct 33308029 TGTCTATTTCACCGAGTCTCTCTCCGAGGCAGTGCCCAAATCATTATGCCTTTCATGCGG 33307970 Query 406 GTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCG 465 || |||||||||| ||||||||||| |||||||||| || ||||||||||| ||||| Sbjct 33307969 GTTGGAACTTACCTGACAAGGAATTGCGCTACCTTAAGA-CGTTATAGTTACGGTCGCCG 33307911 Query 466 TTTACTGGGGCTTC 479 || || | |||||| Sbjct 33307910 TTCACCGAGGCTTC 33307897 >seq3 Length=45779434 Score = 107 bits (118), Expect = 7e-21 Identities = 88/107 (82%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 371 GAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATT 430 |||||||| ||| |||| |||| |||||||||||||||| ||||| ||||| |||||| Sbjct 27906710 GAGACAGCGGGGCAGTCATTACACCATTCGTGCAGGTCGCTACTTATGCGACACGGAATT 27906769 Query 431 TCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCT 477 || ||||||||||| ||| |||||| | | ||||||| |||||| Sbjct 27906770 TCACTACCTTAGGACATTTAAAGTTACTGCTGTCGTTTACCGGGGCT 27906816 >seq7 Length=44630203 Score = 102 bits (112), Expect = 3e-19 Identities = 79/94 (84%), Gaps = 0/94 (0%) Strand=Plus/Plus Query 386 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAT 445 || |||| || ||||||| ||||||||||||||| ||||||||||| |||||||| ||| Sbjct 38585954 TCATTACACCTTTCGTGCTGGTCGGAACTTACCCAACAAGGAATTTTGCTACCTTGGGAC 38586013 Query 446 GGTTATAGTTACCACCGCCGTTTACTGGGGCTTC 479 |||||||||| ||| ||| ||||||||||| Sbjct 38586014 CGTTATAGTTATAGTCGCTGTTCACTGGGGCTTC 38586047 >seq5 Length=42234498 Score = 89.7 bits (98), Expect = 2e-15 Identities = 76/94 (81%), Gaps = 0/94 (0%) Strand=Plus/Plus Query 386 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAT 445 ||||||| || ||| ||| ||| | ||||||||||| ||||||||| ||||||||||||| Sbjct 14952818 TCGTTACACCTTTCATGCGGGTTGAAACTTACCCGATAAGGAATTTTGCTACCTTAGGAT 14952877 Query 446 GGTTATAGTTACCACCGCCGTTTACTGGGGCTTC 479 |||||| |||| | | ||| ||| |||| || Sbjct 14952878 CGTTATAATTACGATTTCTGTTCACTAGGGCCTC 14952911 >seq19 Length=50746504 Score = 87.8 bits (96), Expect = 6e-15 Identities = 111/150 (74%), Gaps = 7/150 (5%) Strand=Plus/Plus Query 411 AACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTAC 470 |||||||| |||||||||||||| |||||||||| | ||||||||| |||||||| | Sbjct 34132361 AACTTACCTGACAAGGAATTTCGTTACCTTAGGACCG-TATAGTTACGGCCGCCGTTCAT 34132419 Query 471 TGGGGCTTCAATTACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTT 530 |||||||| || || ||| || || | | |||| | ||| ||||| Sbjct 34132420 CGGGGCTTCGGTT-GTCGGCTC-----CCCTGTCATCAGGTCACCAACTTCCTTGACCTT 34132473 Query 531 CCAGCACCGGGCAGGCGTCAGTCCGTATAC 560 || |||| |||||||||||||||| |||| Sbjct 34132474 CCGGCACTGGGCAGGCGTCAGTCCCCATAC 34132503 >seq11 Length=34766867 Score = 77.0 bits (84), Expect = 1e-11 Identities = 47/50 (94%), Gaps = 0/50 (0%) Strand=Plus/Plus Query 386 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCT 435 |||||||||| ||||||| ||||||||||||||| ||||||||||||||| Sbjct 27953617 TCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCAACAAGGAATTTCGCT 27953666 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1702379724416