Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glycine_20max_20[refseq_20GCF_5F000004515.4_202015-11-04] 1,191 sequences; 978,971,636 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq19 131 1e-25 seq16 131 1e-25 seq3 118 8e-22 >seq19 Length=50746504 Score = 131 bits (144), Expect = 1e-25 Identities = 219/314 (70%), Gaps = 2/314 (1%) Strand=Plus/Plus Query 61064 TGTTCCCCATCGAGTATGAGGATATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCT 61123 ||||||| ||| | || | | || ||| |||||||| || || ||||| || |||| Sbjct 32415468 TGTTCCCAATCCAATACCCGCAAATCTGGGAAATGTACAAGAAAGCCGAAGCCTCGTTCT 32415527 Query 61124 GGACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAATGACTGGGAG-CGTTTATCGAGC 61182 |||||| ||||||||| || | ||| | ||| | ||||||| | | | ||| | Sbjct 32415528 GGACGGCGGAGGAGGTGGACCTCTCCCAGGACCTCCGCCACTGGGACTCCCTCACCGA-C 32415586 Query 61183 GGTGAACAACATTTCATTAAACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTC 61242 || || | || ||| | | || || | || ||||| ||||| || || || |||||| Sbjct 32415587 GGCGAGCGCCACTTCGTCACCCACGTCCTCGCCTTCTTCGCCGCCTCCGATGGCATCGTC 32415646 Query 61243 AATGAGAATTTATTGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTC 61302 ||||| | | || ||| | ||||| | || | | ||||| || ||| Sbjct 32415647 CTCGAGAACCTCGCCGGGCGCTTCACAAAGGAGATCCAGCTCCCCGAGGCCCGGGCCTTC 32415706 Query 61303 TACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGAT 61362 |||||||||||||| ||||| ||||| ||||||| ||||||||||| | ||| |||| Sbjct 32415707 TACGGCTTCCAGATCGCCATCGAGAACATCCACTCCGAGATGTACAGCCTCCTCCTCGAA 32415766 Query 61363 ACGTACATCAGGGA 61376 || ||||||| ||| Sbjct 32415767 ACCTACATCAAGGA 32415780 >seq16 Length=37887014 Score = 131 bits (144), Expect = 1e-25 Identities = 219/314 (70%), Gaps = 2/314 (1%) Strand=Plus/Minus Query 61064 TGTTCCCCATCGAGTATGAGGATATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCT 61123 ||||||| ||| | ||| | || ||| |||||||| || || ||||| || |||| Sbjct 5527391 TGTTCCCAATCCAATATCCTCAAATCTGGGAAATGTACAAGAAAGCCGAAGCCTCGTTCT 5527332 Query 61124 GGACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAATGACTGGGAG-CGTTTATCGAGC 61182 |||||| ||||||||| || | || | ||| | ||||||| | | | ||| | Sbjct 5527331 GGACGGCGGAGGAGGTGGACCTCTCGCAGGACCTCCGCCACTGGGACTCCCTGACCGA-C 5527273 Query 61183 GGTGAACAACATTTCATTAAACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTC 61242 || || | || ||| | | || || | || ||||| ||||| || ||||| ||||| Sbjct 5527272 GGCGAGCGCCACTTCGTCAGTCACGTCCTCGCCTTCTTCGCCGCCTCCGACGGCATCGTA 5527213 Query 61243 AATGAGAATTTATTGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTC 61302 |||||| | | || ||| || |||| | ||| | | ||||| || ||| Sbjct 5527212 CTTGAGAACCTCGCTGGGCGCTTCACGAAGGAAATCCAAATCCCCGAGGCCCGCGCCTTC 5527153 Query 61303 TACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGAT 61362 |||||||||||||| ||||| ||||| | ||||| ||||||||||| | ||| |||| Sbjct 5527152 TACGGCTTCCAGATCGCCATCGAGAACATTCACTCCGAGATGTACAGCCTCCTCCTCGAA 5527093 Query 61363 ACGTACATCAGGGA 61376 || ||||||| ||| Sbjct 5527092 ACCTACATCAAGGA 5527079 >seq3 Length=45779434 Score = 118 bits (130), Expect = 8e-22 Identities = 542/844 (64%), Gaps = 22/844 (3%) Strand=Plus/Plus Query 61096 ATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGAC 61155 ||||| || || || || || ||||||||||||| ||||||||| || | || | ||| Sbjct 40572710 ATGTATAAGAAAGCCGAGGCCTCCTTCTGGACGGCGGAGGAGGTGGACCTCTCGCAGGAC 40572769 Query 61156 ATGAATGACTGGGAG-CGTTTATCGAGCGGTGAACAACATTTCATTAAACATGTGTTGGC 61214 | |||||| | | | ||| ||| || | || ||||| | || || | || Sbjct 40572770 CTCCGCCACTGGGCCACCCTCAGCGA-CGGCGAGCGCCACTTCATCACCCACGTCCTCGC 40572828 Query 61215 GTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAGGA 61274 ||||| ||||| || ||||| |||||| || || | | || ||| | | || Sbjct 40572829 CTTCTTCGCCGCCTCCGACGGCATCGTCCTAGAAAACCTCGCCGGCCGCTTCACCAAAGA 40572888 Query 61275 GGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCA 61334 | ||| | ||||||| || ||||||||||||||| || ||||| || ||| |||| Sbjct 40572889 AATCCAACTCCCGGAGGCCCGCGCTTTCTACGGCTTCCAAATCGCCATCGAAAATATCCA 40572948 Query 61335 CTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCGGAACGTGAACG 61394 ||| || |||||||| | ||| | || || ||||||| || | ||| | || Sbjct 40572949 CTCCGAAATGTACAGCCTCCTCTTAGAAACCTACATCAAAGACTCCACAGAAAAAAATCG 40573008 Query 61395 ATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAA 61454 |||| ||||| | || || || | | ||||| | |||||| || Sbjct 40573009 TCTGTTTCGCGCCATAAACACCATCCCATGCATCACCAAAAAAGCCCAGTGGGCCCTCCG 40573068 Query 61455 TTGGATCACCAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGA 61514 ||||| | | | | | | || | || || | ||||||| || ||||| Sbjct 40573069 CTGGAT---CGATGCCTCAGAATCCTTCGCGGAGCGCCTCGTGGCATTCGCTTGCGTCGA 40573125 Query 61515 GGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTAT 61574 ||| |||| ||| ||| ||| ||| || |||||| | ||||| ||||| | || Sbjct 40573126 GGGAATATTCTTCTCCGGAAGCTTTTGCGCGATATTTTGGCTCAAGAAGCGTGGGTTAAT 40573185 Query 61575 GCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTGATTT 61634 ||| || || |||||| ||| || | || || || || ||||| | || || || || Sbjct 40573186 GCCGGGGCTCACCTTCTCCAACGAACTCATCTCGCGAGATGAGGGGCTTCACTGCGACTT 40573245 Query 61635 TGCTGTTTTGCTATTCAAACGC-TATCTGG-TGAATCGTCCGTCGGAGGAGCGTGTGGGT 61692 || || | || | | ||| | || || ||| | | || |||||||| ||| | Sbjct 40573246 CGC-GTGTCTCT-TGTACTCGCTTCTCAGGAAGAAGC-TTAGT--GAGGAGCGCGTGAGG 40573300 Query 61693 GAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGACTGACGCTTTGCCCGTC 61752 |||||||| ||||| ||||| || || ||| ||| || ||||| | |||| Sbjct 40573301 GAGATTGTGCGTGACGCGGTGGAGATTGAGAGGGAGTTTGTGTGCGACGCGCT-TCCGTG 40573359 Query 61753 T-CACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAATTTGTTGCCGACCG 61811 | | | | || ||||| | | | ||| | ||||||||| |||||||| || Sbjct 40573360 TGCGTTGGTGGGGATGAACGGGGAGTTGATGAGTCGGTATATTGAGTTTGTTGCGGA--- 40573416 Query 61812 TCTGTTGGTCGAT----TTGGGTATGAAGCGGATCTATAATACGAAAAACCCATTTGATT 61867 || |||| | ||| |||||| || | | | || | | | || || ||||||| Sbjct 40573417 TCGGTTGCTGGATGCGCTTGGGTGTG-GGAAGGTGTACGGTGCTCAGAATCCCTTTGATT 40573475 Query 61868 TCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACGTGTAGGCGACT 61927 ||||| | |||||||| | || || || || || || ||||| || || || || | Sbjct 40573476 GGATGGAGCTTATTTCGCTTCAGGGGAAAACTAACTTCTTTGAGAAGCGCGTTGGGGAGT 40573535 Query 61928 ATCA 61931 | || Sbjct 40573536 ACCA 40573539 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397562229176240