Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glycine_20soja_20[genbank_20GCA_5F000722935.2_202014-12-17] 33,170 sequences; 863,568,428 total letters Query= AAMG01000140.1 Length=336 Score E Sequences producing significant alignments: (Bits) Value seq30937 194 3e-47 seq13785 75.2 2e-11 >seq30937 Length=4778 Score = 194 bits (214), Expect = 3e-47 Identities = 238/324 (73%), Gaps = 6/324 (2%) Strand=Plus/Minus Query 11 AGGGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGAGTGATTCG 70 ||||| |||||||||| |||||| ||| | || ||||||| |||||||| || ||| Sbjct 2422 AGGGGAGTGAAATAGAACCTGAAACCGTGTGCATACAAGCAGTCGGAGCGGACATGTTCC 2363 Query 71 GTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAGGTTAAGG 130 |||||||||| ||||||| |||||| | | ||| ||| | || ||| ||||||| Sbjct 2362 GTGACGGCGTACCTTTTGTATAATGGGTCAGCGACTTA-TATTCTGTAGCAAGGTTAACC 2304 Query 131 GCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTGGTGGCGC 190 | | || ||||| || |||| |||| ||||| |||||| | ||||| || Sbjct 2303 GAATAGGGG-----AGCCGTAGGGAAACCGAGTCTTAATAGGGCGTCTAGTTGCAGGGTA 2249 Query 191 TAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGATGG 250 ||||| ||||||| |||||||| ||| |||||||||||| | ||||| | || Sbjct 2248 TAGACCCGAAACCGAGTGATCTATCCATGAGCAGGTTGAAAGTGACGTAACAGTTACCGG 2189 Query 251 AGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGGC 310 ||||||||||| |||||||||| |||||||| | || |||||||||||||| Sbjct 2188 AGGACCGAACCCACTGTCGTTGAAAAGCCAGGGGATGACTTGTGGATAGGGGTGAAAGGC 2129 Query 311 CAATCAAACTGGGAAATAGCTCGT 334 ||||||||| || |||||| || Sbjct 2128 TAATCAAACTCGGTGATAGCTGGT 2105 >seq13785 Length=113992 Score = 75.2 bits (82), Expect = 2e-11 Identities = 103/143 (72%), Gaps = 1/143 (1%) Strand=Plus/Plus Query 193 GACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTC-GCGGTAACGCGTGATGGA 251 ||| ||||||| |||||| ||| ||||||||||||| || |||| |||| Sbjct 106338 GACCCGAAACCGATCGATCTAGCCATGAGCAGGTTGAAGAGAGCTCTAACAGACCTTGGA 106397 Query 252 GGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGGCC 311 |||||||||| | || | ||| | |||||||| | || ||||||||||||||| Sbjct 106398 GGACCGAACCCACGTATGTGGCAAAATACGGGGATGACTTGTGGCTAGGGGTGAAAGGCC 106457 Query 312 AATCAAACTGGGAAATAGCTCGT 334 || ||| | ||| |||||| || Sbjct 106458 AACCAAGATCGGATATAGCTGGT 106480 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 972477322240