Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glycine_20soja_20[genbank_20GCA_5F000722935.2_202014-12-17] 33,170 sequences; 863,568,428 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq2869 120 2e-25 seq8412 78.8 5e-13 seq2868 77.0 2e-12 >seq2869 Length=57491 Score = 120 bits (132), Expect = 2e-25 Identities = 99/118 (84%), Gaps = 2/118 (2%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCG-AGTCAAAATGATAACATCGCC 59 ||||||||||||||||||||||| ||||||||| |||| |||| || |||||| Sbjct 34587 GAACCCAAAGACTTTGATTTCTCATAAGGTGCC-AGCGAAGTCCTAAAAGCAACATCCGT 34645 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||| ||| |||| ||||| |||| |||||| |||||||||||||||||||||| Sbjct 34646 TGATCCCTGGTCAGCATCGTTTATGGTTGAGACTAGGACGGTATCTGATCGTCTTCGA 34703 >seq8412 Length=78781 Score = 78.8 bits (86), Expect = 5e-13 Identities = 84/111 (76%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 7 AAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCCGATCCC 66 ||||||||||||||||| ||||||||| ||||| || ||||||| |||||| Sbjct 61033 AAAGACTTTGATTTCTCATAAGGTGCCAGTGGAGTCCTAAAAGCAACATCGATTGATCCC 61092 Query 67 TAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||| | ||| |||| | || | |||| || | ||| |||||||||| || Sbjct 61093 TAGTTGACATCATTTATGATTGACACTAGGATGATATTTGATCGTCTTTGA 61143 >seq2868 Length=210960 Score = 77.0 bits (84), Expect = 2e-12 Identities = 87/117 (74%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 |||| ||||||||||||||||| ||||||| | | ||||| || ||||| Sbjct 4851 GAACTAAAAGACTTTGATTTCTCATAAGGTGTCAACGGAGTCCTAAAAGCAACATTAGTT 4910 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||| | |||| ||| ||||| |||| || ||| || ||||| ||||| |||| || Sbjct 4911 GATCCTTGGTCGACATTGTTTATGGTTGAGTCTAGGAAGGTATTTGATCATCTTTGA 4967 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278313426300